# Assembly name: NDDB_SH_1 # Organism name: Bubalus bubalis (water buffalo) # Infraspecific name: breed=Murrah # Isolate: 160015118507 # Sex: female # Taxid: 89462 # BioSample: SAMN11104991 # BioProject: PRJNA525182 # Submitter: National Dairy Development Board, India # Date: 2021-09-10 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Complete Genome # Genome representation: full # WGS project: VDCB01 # Assembly method: Falcon+Scaff10X+BioNano v. 2019-02-25 # Expected final version: yes # Genome coverage: 572.0x # Sequencing technology: PacBio Sequel; 10X and BioNano Optical Map # RefSeq category: Representative Genome # GenBank assembly accession: GCA_019923935.1 # RefSeq assembly accession: GCF_019923935.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCF_019923925.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_019923955.1 GCF_019923955.1 Primary Assembly ## GCA_019923965.1 GCF_020543565.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 1 assembled-molecule 1 Chromosome CM034271.1 = NC_059157.1 Primary Assembly 202348575 na 2 assembled-molecule 2 Chromosome CM034272.1 = NC_059158.1 Primary Assembly 188164321 na 3 assembled-molecule 3 Chromosome CM034273.1 = NC_059159.1 Primary Assembly 174872328 na 4 assembled-molecule 4 Chromosome CM034274.1 = NC_059160.1 Primary Assembly 164971372 na 5 assembled-molecule 5 Chromosome CM034275.1 = NC_059161.1 Primary Assembly 132500020 na 6 assembled-molecule 6 Chromosome CM034276.1 = NC_059162.1 Primary Assembly 120418900 na 7 assembled-molecule 7 Chromosome CM034277.1 = NC_059163.1 Primary Assembly 116997125 na 8 assembled-molecule 8 Chromosome CM034278.1 = NC_059164.1 Primary Assembly 119318788 na 9 assembled-molecule 9 Chromosome CM034279.1 = NC_059165.1 Primary Assembly 110262714 na 10 assembled-molecule 10 Chromosome CM034280.1 = NC_059166.1 Primary Assembly 104551495 na 11 assembled-molecule 11 Chromosome CM034281.1 = NC_059167.1 Primary Assembly 102416932 na 12 assembled-molecule 12 Chromosome CM034282.1 = NC_059168.1 Primary Assembly 106386409 na 13 assembled-molecule 13 Chromosome CM034283.1 = NC_059169.1 Primary Assembly 89364132 na 14 assembled-molecule 14 Chromosome CM034284.1 = NC_059170.1 Primary Assembly 83479656 na 15 assembled-molecule 15 Chromosome CM034285.1 = NC_059171.1 Primary Assembly 81832314 na 16 assembled-molecule 16 Chromosome CM034286.1 = NC_059172.1 Primary Assembly 85115218 na 17 assembled-molecule 17 Chromosome CM034287.1 = NC_059173.1 Primary Assembly 72603365 na 18 assembled-molecule 18 Chromosome CM034288.1 = NC_059174.1 Primary Assembly 65791760 na 19 assembled-molecule 19 Chromosome CM034289.1 = NC_059175.1 Primary Assembly 71582194 na 20 assembled-molecule 20 Chromosome CM034290.1 = NC_059176.1 Primary Assembly 69611172 na 21 assembled-molecule 21 Chromosome CM034291.1 = NC_059177.1 Primary Assembly 60624307 na 22 assembled-molecule 22 Chromosome CM034292.1 = NC_059178.1 Primary Assembly 61771150 na 23 assembled-molecule 23 Chromosome CM034293.1 = NC_059179.1 Primary Assembly 52095120 na 24 assembled-molecule 24 Chromosome CM034294.1 = NC_059180.1 Primary Assembly 42172481 na X assembled-molecule X Chromosome CM034295.1 = NC_059181.1 Primary Assembly 143192433 na MT assembled-molecule MT Mitochondrion CM034296.1 <> na non-nuclear 16357 na MT assembled-molecule MT Mitochondrion na <> NC_049568.1 non-nuclear 16358 na