# Assembly name: ilHelZeax1.1 # Organism name: Helicoverpa zea (corn earworm) # Isolate: HzStark_Cry1AcR # Sex: male # Taxid: 7113 # BioSample: SAMN25818888 # BioProject: PRJNA807638 # Submitter: United States Department of Agriculture # Date: 2022-03-18 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: minor # Assembly level: Chromosome # Genome representation: full # WGS project: JAKYJW01 # Assembly method: FALCON v. 1.8.1; FALCON-Unzip v. 1.3.7; purge_dups v. 1.2.5; bwa-mem v. 2.2.1; Juicebox v. 1.11.08; Arrow gcpp v. 2.0.2; FreeBayes v. 1.0.2; Merqury v. 1.1 # Expected final version: yes # Genome coverage: 144x # Sequencing technology: PacBio Sequel II CLR; Illumina NovaSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_022581195.1 # RefSeq assembly accession: GCF_022581195.2 # RefSeq assembly and GenBank assemblies identical: yes # Linked assembly: GCA_022581175.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_022581205.1 GCF_022581205.1 Primary Assembly ## GCA_022623715.1 GCF_022687225.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name pri_000001Farrow_1 assembled-molecule 1 Chromosome CM040203.1 = NC_061452.1 Primary Assembly 15512169 na priscaff17 assembled-molecule 2 Chromosome CM040204.1 = NC_061453.1 Primary Assembly 15061584 na pri_000002Farrow_1 assembled-molecule 3 Chromosome CM040205.1 = NC_061454.1 Primary Assembly 14695159 na priscaff31 assembled-molecule 4 Chromosome CM040206.1 = NC_061455.1 Primary Assembly 14165716 na pri_000003Farrow_1 assembled-molecule 5 Chromosome CM040207.1 = NC_061456.1 Primary Assembly 14051263 na priscaff9 assembled-molecule 6 Chromosome CM040208.1 = NC_061457.1 Primary Assembly 14023251 na priscaff18 assembled-molecule 7 Chromosome CM040209.1 = NC_061458.1 Primary Assembly 13649923 na priscaff26 assembled-molecule 8 Chromosome CM040210.1 = NC_061459.1 Primary Assembly 13649271 na pri_000004Farrow_1 assembled-molecule 9 Chromosome CM040211.1 = NC_061460.1 Primary Assembly 13615264 na priscaff12 assembled-molecule 10 Chromosome CM040212.1 = NC_061461.1 Primary Assembly 13258385 na priscaff16 assembled-molecule 11 Chromosome CM040213.1 = NC_061462.1 Primary Assembly 13088840 na pri_000005Farrow_1 assembled-molecule 12 Chromosome CM040214.1 = NC_061463.1 Primary Assembly 12972780 na priscaff7 assembled-molecule 13 Chromosome CM040215.1 = NC_061464.1 Primary Assembly 12841304 na priscaff14 assembled-molecule 14 Chromosome CM040216.1 = NC_061465.1 Primary Assembly 12757947 na priscaff21 assembled-molecule 15 Chromosome CM040217.1 = NC_061466.1 Primary Assembly 12605921 na priscaff19 assembled-molecule 16 Chromosome CM040218.1 = NC_061467.1 Primary Assembly 12332656 na pri_000007Farrow_1 assembled-molecule 17 Chromosome CM040219.1 = NC_061468.1 Primary Assembly 12254882 na priscaff11 assembled-molecule 18 Chromosome CM040220.1 = NC_061469.1 Primary Assembly 12245473 na priscaff28 assembled-molecule 19 Chromosome CM040221.1 = NC_061470.1 Primary Assembly 11629846 na priscaff1 assembled-molecule 20 Chromosome CM040222.1 = NC_061471.1 Primary Assembly 11599754 na priscaff10 assembled-molecule 21 Chromosome CM040223.1 = NC_061472.1 Primary Assembly 11461517 na priscaff24 assembled-molecule 22 Chromosome CM040224.1 = NC_061473.1 Primary Assembly 10871041 na pri_000012Farrow_1 assembled-molecule 23 Chromosome CM040225.1 = NC_061474.1 Primary Assembly 10422137 na priscaff23 assembled-molecule 24 Chromosome CM040226.1 = NC_061475.1 Primary Assembly 9742508 na priscaff20 assembled-molecule 25 Chromosome CM040227.1 = NC_061476.1 Primary Assembly 9280487 na priscaff22 assembled-molecule 26 Chromosome CM040228.1 = NC_061477.1 Primary Assembly 9278413 na priscaff27 assembled-molecule 27 Chromosome CM040229.1 = NC_061478.1 Primary Assembly 7355033 na priscaff29 assembled-molecule 28 Chromosome CM040230.1 = NC_061479.1 Primary Assembly 7211800 na priscaff30 assembled-molecule 29 Chromosome CM040231.1 = NC_061480.1 Primary Assembly 7203478 na priscaff25 assembled-molecule 30 Chromosome CM040232.1 = NC_061481.1 Primary Assembly 6316813 na priscaff15 assembled-molecule 31 Chromosome CM040233.1 = NC_061482.1 Primary Assembly 18805280 na pri_000016Farrow_1_scaff_4_deb unplaced-scaffold na na JAKYJW010000032.1 = NW_025899711.1 Primary Assembly 500001 na pri_000016Farrow_1_scaff_6_deb unplaced-scaffold na na JAKYJW010000033.1 = NW_025899712.1 Primary Assembly 250000 na pri_000069Farrow_1_scaff_2_deb unplaced-scaffold na na JAKYJW010000034.1 = NW_025899713.1 Primary Assembly 125021 na pri_000117Farrow_1 unplaced-scaffold na na JAKYJW010000035.1 = NW_025899714.1 Primary Assembly 88156 na pri_000124Farrow_1 unplaced-scaffold na na JAKYJW010000036.1 = NW_025899715.1 Primary Assembly 51777 na pri_000119Farrow_1 unplaced-scaffold na na JAKYJW010000037.1 = NW_025899716.1 Primary Assembly 47286 na pri_000126Farrow_1 unplaced-scaffold na na JAKYJW010000038.1 = NW_025899717.1 Primary Assembly 42317 na pri_000110Farrow_1 unplaced-scaffold na na JAKYJW010000039.1 = NW_025899718.1 Primary Assembly 34946 na pri_000116Farrow_1 unplaced-scaffold na na JAKYJW010000040.1 = NW_025899719.1 Primary Assembly 25017 na pri_000136Farrow_1 unplaced-scaffold na na JAKYJW010000041.1 = NW_025899720.1 Primary Assembly 20924 na pri_000137Farrow_1 unplaced-scaffold na na JAKYJW010000042.1 = NW_025899721.1 Primary Assembly 20253 na MT assembled-molecule MT Mitochondrion OM990843.1 = NC_061507.1 non-nuclear 15351 na