# Assembly name: ASM2328376v1 # Organism name: Shewanella profunda (g-proteobacteria) # Infraspecific name: strain=DSM 15900 # Taxid: 254793 # BioSample: SAMN24537880 # BioProject: PRJNA526057 # Submitter: Karolinska Institutet # Date: 2022-05-09 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAKILG01 # Assembly method: SPAdes v. 3.14.1 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: MGI DNBSEQ G400 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_023283765.1 # RefSeq assembly accession: GCF_023283765.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023283785.1 GCF_023283785.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig00001 unplaced-scaffold na na JAKILG010000001.1 = NZ_JAKILG010000001.1 Primary Assembly 221735 na contig00002 unplaced-scaffold na na JAKILG010000002.1 = NZ_JAKILG010000002.1 Primary Assembly 217312 na contig00003 unplaced-scaffold na na JAKILG010000003.1 = NZ_JAKILG010000003.1 Primary Assembly 217137 na contig00004 unplaced-scaffold na na JAKILG010000004.1 = NZ_JAKILG010000004.1 Primary Assembly 195871 na contig00005 unplaced-scaffold na na JAKILG010000005.1 = NZ_JAKILG010000005.1 Primary Assembly 164757 na contig00006 unplaced-scaffold na na JAKILG010000006.1 = NZ_JAKILG010000006.1 Primary Assembly 154855 na contig00007 unplaced-scaffold na na JAKILG010000007.1 = NZ_JAKILG010000007.1 Primary Assembly 131971 na contig00008 unplaced-scaffold na na JAKILG010000008.1 = NZ_JAKILG010000008.1 Primary Assembly 120227 na contig00009 unplaced-scaffold na na JAKILG010000009.1 = NZ_JAKILG010000009.1 Primary Assembly 115620 na contig00010 unplaced-scaffold na na JAKILG010000010.1 = NZ_JAKILG010000010.1 Primary Assembly 113216 na contig00011 unplaced-scaffold na na JAKILG010000011.1 = NZ_JAKILG010000011.1 Primary Assembly 108759 na contig00012 unplaced-scaffold na na JAKILG010000012.1 = NZ_JAKILG010000012.1 Primary Assembly 103070 na contig00013 unplaced-scaffold na na JAKILG010000013.1 = NZ_JAKILG010000013.1 Primary Assembly 98155 na contig00014 unplaced-scaffold na na JAKILG010000014.1 = NZ_JAKILG010000014.1 Primary Assembly 94076 na contig00015 unplaced-scaffold na na JAKILG010000015.1 = NZ_JAKILG010000015.1 Primary Assembly 92574 na contig00016 unplaced-scaffold na na JAKILG010000016.1 = NZ_JAKILG010000016.1 Primary Assembly 91295 na contig00017 unplaced-scaffold na na JAKILG010000017.1 = NZ_JAKILG010000017.1 Primary Assembly 88613 na contig00018 unplaced-scaffold na na JAKILG010000018.1 = NZ_JAKILG010000018.1 Primary Assembly 84139 na contig00019 unplaced-scaffold na na JAKILG010000019.1 = NZ_JAKILG010000019.1 Primary Assembly 69237 na contig00020 unplaced-scaffold na na JAKILG010000020.1 = NZ_JAKILG010000020.1 Primary Assembly 67858 na contig00021 unplaced-scaffold na na JAKILG010000021.1 = NZ_JAKILG010000021.1 Primary Assembly 66655 na contig00022 unplaced-scaffold na na JAKILG010000022.1 = NZ_JAKILG010000022.1 Primary Assembly 66065 na contig00023 unplaced-scaffold na na JAKILG010000023.1 = NZ_JAKILG010000023.1 Primary Assembly 65916 na contig00024 unplaced-scaffold na na JAKILG010000024.1 = NZ_JAKILG010000024.1 Primary Assembly 64311 na contig00025 unplaced-scaffold na na JAKILG010000025.1 = NZ_JAKILG010000025.1 Primary Assembly 63807 na contig00026 unplaced-scaffold na na JAKILG010000026.1 = NZ_JAKILG010000026.1 Primary Assembly 63285 na contig00027 unplaced-scaffold na na JAKILG010000027.1 = NZ_JAKILG010000027.1 Primary Assembly 61495 na contig00028 unplaced-scaffold na na JAKILG010000028.1 = NZ_JAKILG010000028.1 Primary Assembly 60445 na contig00029 unplaced-scaffold na na JAKILG010000029.1 = NZ_JAKILG010000029.1 Primary Assembly 58240 na contig00030 unplaced-scaffold na na JAKILG010000030.1 = NZ_JAKILG010000030.1 Primary Assembly 57251 na contig00031 unplaced-scaffold na na JAKILG010000031.1 = NZ_JAKILG010000031.1 Primary Assembly 55549 na contig00032 unplaced-scaffold na na JAKILG010000032.1 = NZ_JAKILG010000032.1 Primary Assembly 52784 na contig00033 unplaced-scaffold na na JAKILG010000033.1 = NZ_JAKILG010000033.1 Primary Assembly 52711 na contig00034 unplaced-scaffold na na JAKILG010000034.1 = NZ_JAKILG010000034.1 Primary Assembly 51828 na contig00035 unplaced-scaffold na na JAKILG010000035.1 = NZ_JAKILG010000035.1 Primary Assembly 51806 na contig00036 unplaced-scaffold na na JAKILG010000036.1 = NZ_JAKILG010000036.1 Primary Assembly 51602 na contig00037 unplaced-scaffold na na JAKILG010000037.1 = NZ_JAKILG010000037.1 Primary Assembly 51331 na contig00038 unplaced-scaffold na na JAKILG010000038.1 = NZ_JAKILG010000038.1 Primary Assembly 49956 na contig00039 unplaced-scaffold na na JAKILG010000039.1 = NZ_JAKILG010000039.1 Primary Assembly 47931 na contig00040 unplaced-scaffold na na JAKILG010000040.1 = NZ_JAKILG010000040.1 Primary Assembly 44021 na contig00041 unplaced-scaffold na na JAKILG010000041.1 = NZ_JAKILG010000041.1 Primary Assembly 43693 na contig00042 unplaced-scaffold na na JAKILG010000042.1 = NZ_JAKILG010000042.1 Primary Assembly 42555 na contig00043 unplaced-scaffold na na JAKILG010000043.1 = NZ_JAKILG010000043.1 Primary Assembly 39816 na contig00044 unplaced-scaffold na na JAKILG010000044.1 = NZ_JAKILG010000044.1 Primary Assembly 39608 na contig00045 unplaced-scaffold na na JAKILG010000045.1 = NZ_JAKILG010000045.1 Primary Assembly 38978 na contig00046 unplaced-scaffold na na JAKILG010000046.1 = NZ_JAKILG010000046.1 Primary Assembly 37742 na contig00047 unplaced-scaffold na na JAKILG010000047.1 = NZ_JAKILG010000047.1 Primary Assembly 35208 na contig00048 unplaced-scaffold na na JAKILG010000048.1 = NZ_JAKILG010000048.1 Primary Assembly 34986 na contig00049 unplaced-scaffold na na JAKILG010000049.1 = NZ_JAKILG010000049.1 Primary Assembly 34075 na contig00050 unplaced-scaffold na na JAKILG010000050.1 = NZ_JAKILG010000050.1 Primary Assembly 30755 na contig00051 unplaced-scaffold na na JAKILG010000051.1 = NZ_JAKILG010000051.1 Primary Assembly 29410 na contig00052 unplaced-scaffold na na JAKILG010000052.1 = NZ_JAKILG010000052.1 Primary Assembly 29384 na contig00053 unplaced-scaffold na na JAKILG010000053.1 = NZ_JAKILG010000053.1 Primary Assembly 29086 na contig00054 unplaced-scaffold na na JAKILG010000054.1 = NZ_JAKILG010000054.1 Primary Assembly 29025 na contig00055 unplaced-scaffold na na JAKILG010000055.1 = NZ_JAKILG010000055.1 Primary Assembly 28588 na contig00056 unplaced-scaffold na na JAKILG010000056.1 = NZ_JAKILG010000056.1 Primary Assembly 26215 na contig00057 unplaced-scaffold na na JAKILG010000057.1 = NZ_JAKILG010000057.1 Primary Assembly 24936 na contig00058 unplaced-scaffold na na JAKILG010000058.1 = NZ_JAKILG010000058.1 Primary Assembly 23960 na contig00059 unplaced-scaffold na na JAKILG010000059.1 = NZ_JAKILG010000059.1 Primary Assembly 23763 na contig00060 unplaced-scaffold na na JAKILG010000060.1 = NZ_JAKILG010000060.1 Primary Assembly 23751 na contig00061 unplaced-scaffold na na JAKILG010000061.1 = NZ_JAKILG010000061.1 Primary Assembly 23599 na contig00062 unplaced-scaffold na na JAKILG010000062.1 = NZ_JAKILG010000062.1 Primary Assembly 23563 na contig00063 unplaced-scaffold na na JAKILG010000063.1 = NZ_JAKILG010000063.1 Primary Assembly 22587 na contig00064 unplaced-scaffold na na JAKILG010000064.1 = NZ_JAKILG010000064.1 Primary Assembly 20565 na contig00065 unplaced-scaffold na na JAKILG010000065.1 = NZ_JAKILG010000065.1 Primary Assembly 18656 na contig00066 unplaced-scaffold na na JAKILG010000066.1 = NZ_JAKILG010000066.1 Primary Assembly 18526 na contig00067 unplaced-scaffold na na JAKILG010000067.1 = NZ_JAKILG010000067.1 Primary Assembly 17602 na contig00068 unplaced-scaffold na na JAKILG010000068.1 = NZ_JAKILG010000068.1 Primary Assembly 15992 na contig00069 unplaced-scaffold na na JAKILG010000069.1 = NZ_JAKILG010000069.1 Primary Assembly 15839 na contig00070 unplaced-scaffold na na JAKILG010000070.1 = NZ_JAKILG010000070.1 Primary Assembly 14966 na contig00071 unplaced-scaffold na na JAKILG010000071.1 = NZ_JAKILG010000071.1 Primary Assembly 14758 na contig00072 unplaced-scaffold na na JAKILG010000072.1 = NZ_JAKILG010000072.1 Primary Assembly 14524 na contig00073 unplaced-scaffold na na JAKILG010000073.1 = NZ_JAKILG010000073.1 Primary Assembly 14323 na contig00074 unplaced-scaffold na na JAKILG010000074.1 = NZ_JAKILG010000074.1 Primary Assembly 13318 na contig00075 unplaced-scaffold na na JAKILG010000075.1 = NZ_JAKILG010000075.1 Primary Assembly 12844 na contig00076 unplaced-scaffold na na JAKILG010000076.1 = NZ_JAKILG010000076.1 Primary Assembly 11462 na contig00077 unplaced-scaffold na na JAKILG010000077.1 = NZ_JAKILG010000077.1 Primary Assembly 10580 na contig00078 unplaced-scaffold na na JAKILG010000078.1 = NZ_JAKILG010000078.1 Primary Assembly 10405 na contig00079 unplaced-scaffold na na JAKILG010000079.1 = NZ_JAKILG010000079.1 Primary Assembly 10075 na contig00080 unplaced-scaffold na na JAKILG010000080.1 = NZ_JAKILG010000080.1 Primary Assembly 8505 na contig00081 unplaced-scaffold na na JAKILG010000081.1 = NZ_JAKILG010000081.1 Primary Assembly 8359 na contig00082 unplaced-scaffold na na JAKILG010000082.1 = NZ_JAKILG010000082.1 Primary Assembly 7902 na contig00083 unplaced-scaffold na na JAKILG010000083.1 = NZ_JAKILG010000083.1 Primary Assembly 6292 na contig00084 unplaced-scaffold na na JAKILG010000084.1 = NZ_JAKILG010000084.1 Primary Assembly 5654 na contig00085 unplaced-scaffold na na JAKILG010000085.1 = NZ_JAKILG010000085.1 Primary Assembly 5230 na contig00086 unplaced-scaffold na na JAKILG010000086.1 = NZ_JAKILG010000086.1 Primary Assembly 4811 na contig00087 unplaced-scaffold na na JAKILG010000087.1 = NZ_JAKILG010000087.1 Primary Assembly 4080 na contig00088 unplaced-scaffold na na JAKILG010000088.1 = NZ_JAKILG010000088.1 Primary Assembly 4053 na contig00089 unplaced-scaffold na na JAKILG010000089.1 = NZ_JAKILG010000089.1 Primary Assembly 3344 na contig00090 unplaced-scaffold na na JAKILG010000090.1 = NZ_JAKILG010000090.1 Primary Assembly 2459 na contig00091 unplaced-scaffold na na JAKILG010000091.1 = NZ_JAKILG010000091.1 Primary Assembly 2457 na contig00092 unplaced-scaffold na na JAKILG010000092.1 = NZ_JAKILG010000092.1 Primary Assembly 2392 na contig00093 unplaced-scaffold na na JAKILG010000093.1 = NZ_JAKILG010000093.1 Primary Assembly 2385 na contig00094 unplaced-scaffold na na JAKILG010000094.1 = NZ_JAKILG010000094.1 Primary Assembly 2370 na contig00095 unplaced-scaffold na na JAKILG010000095.1 = NZ_JAKILG010000095.1 Primary Assembly 2229 na contig00096 unplaced-scaffold na na JAKILG010000096.1 = NZ_JAKILG010000096.1 Primary Assembly 2206 na contig00097 unplaced-scaffold na na JAKILG010000097.1 = NZ_JAKILG010000097.1 Primary Assembly 1881 na contig00098 unplaced-scaffold na na JAKILG010000098.1 = NZ_JAKILG010000098.1 Primary Assembly 1845 na contig00099 unplaced-scaffold na na JAKILG010000099.1 = NZ_JAKILG010000099.1 Primary Assembly 1670 na contig00100 unplaced-scaffold na na JAKILG010000100.1 = NZ_JAKILG010000100.1 Primary Assembly 1578 na contig00101 unplaced-scaffold na na JAKILG010000101.1 = NZ_JAKILG010000101.1 Primary Assembly 1569 na contig00102 unplaced-scaffold na na JAKILG010000102.1 = NZ_JAKILG010000102.1 Primary Assembly 1555 na contig00103 unplaced-scaffold na na JAKILG010000103.1 = NZ_JAKILG010000103.1 Primary Assembly 1521 na contig00104 unplaced-scaffold na na JAKILG010000104.1 = NZ_JAKILG010000104.1 Primary Assembly 1504 na contig00105 unplaced-scaffold na na JAKILG010000105.1 = NZ_JAKILG010000105.1 Primary Assembly 1464 na contig00106 unplaced-scaffold na na JAKILG010000106.1 = NZ_JAKILG010000106.1 Primary Assembly 1376 na contig00107 unplaced-scaffold na na JAKILG010000107.1 = NZ_JAKILG010000107.1 Primary Assembly 1352 na contig00108 unplaced-scaffold na na JAKILG010000108.1 = NZ_JAKILG010000108.1 Primary Assembly 1240 na contig00109 unplaced-scaffold na na JAKILG010000109.1 = NZ_JAKILG010000109.1 Primary Assembly 1215 na contig00110 unplaced-scaffold na na JAKILG010000110.1 = NZ_JAKILG010000110.1 Primary Assembly 1136 na contig00111 unplaced-scaffold na na JAKILG010000111.1 = NZ_JAKILG010000111.1 Primary Assembly 1128 na contig00112 unplaced-scaffold na na JAKILG010000112.1 = NZ_JAKILG010000112.1 Primary Assembly 997 na contig00113 unplaced-scaffold na na JAKILG010000113.1 = NZ_JAKILG010000113.1 Primary Assembly 932 na contig00114 unplaced-scaffold na na JAKILG010000114.1 = NZ_JAKILG010000114.1 Primary Assembly 859 na contig00115 unplaced-scaffold na na JAKILG010000115.1 = NZ_JAKILG010000115.1 Primary Assembly 833 na contig00116 unplaced-scaffold na na JAKILG010000116.1 = NZ_JAKILG010000116.1 Primary Assembly 772 na contig00117 unplaced-scaffold na na JAKILG010000117.1 = NZ_JAKILG010000117.1 Primary Assembly 748 na contig00118 unplaced-scaffold na na JAKILG010000118.1 = NZ_JAKILG010000118.1 Primary Assembly 666 na contig00119 unplaced-scaffold na na JAKILG010000119.1 = NZ_JAKILG010000119.1 Primary Assembly 630 na contig00120 unplaced-scaffold na na JAKILG010000120.1 = NZ_JAKILG010000120.1 Primary Assembly 557 na contig00121 unplaced-scaffold na na JAKILG010000121.1 = NZ_JAKILG010000121.1 Primary Assembly 510 na