# Assembly name: ASM2328402v1 # Organism name: Shewanella abyssi (g-proteobacteria) # Infraspecific name: strain=DSM 17171 # Taxid: 311789 # BioSample: SAMN24537865 # BioProject: PRJNA526057 # Submitter: Karolinska Institutet # Date: 2022-05-09 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAKIKR01 # Assembly method: SPAdes v. 3.14.1 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: MGI DNBSEQ G400 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_023284025.1 # RefSeq assembly accession: GCF_023284025.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023284035.1 GCF_023284035.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig00001 unplaced-scaffold na na JAKIKR010000001.1 = NZ_JAKIKR010000001.1 Primary Assembly 340127 na contig00002 unplaced-scaffold na na JAKIKR010000002.1 = NZ_JAKIKR010000002.1 Primary Assembly 177194 na contig00003 unplaced-scaffold na na JAKIKR010000003.1 = NZ_JAKIKR010000003.1 Primary Assembly 167866 na contig00004 unplaced-scaffold na na JAKIKR010000004.1 = NZ_JAKIKR010000004.1 Primary Assembly 148639 na contig00005 unplaced-scaffold na na JAKIKR010000005.1 = NZ_JAKIKR010000005.1 Primary Assembly 144405 na contig00006 unplaced-scaffold na na JAKIKR010000006.1 = NZ_JAKIKR010000006.1 Primary Assembly 133059 na contig00007 unplaced-scaffold na na JAKIKR010000007.1 = NZ_JAKIKR010000007.1 Primary Assembly 129435 na contig00008 unplaced-scaffold na na JAKIKR010000008.1 = NZ_JAKIKR010000008.1 Primary Assembly 119433 na contig00009 unplaced-scaffold na na JAKIKR010000009.1 = NZ_JAKIKR010000009.1 Primary Assembly 116159 na contig00010 unplaced-scaffold na na JAKIKR010000010.1 = NZ_JAKIKR010000010.1 Primary Assembly 107408 na contig00011 unplaced-scaffold na na JAKIKR010000011.1 = NZ_JAKIKR010000011.1 Primary Assembly 98977 na contig00012 unplaced-scaffold na na JAKIKR010000012.1 = NZ_JAKIKR010000012.1 Primary Assembly 95891 na contig00013 unplaced-scaffold na na JAKIKR010000013.1 = NZ_JAKIKR010000013.1 Primary Assembly 95434 na contig00014 unplaced-scaffold na na JAKIKR010000014.1 = NZ_JAKIKR010000014.1 Primary Assembly 91739 na contig00015 unplaced-scaffold na na JAKIKR010000015.1 = NZ_JAKIKR010000015.1 Primary Assembly 90504 na contig00016 unplaced-scaffold na na JAKIKR010000016.1 = NZ_JAKIKR010000016.1 Primary Assembly 89822 na contig00017 unplaced-scaffold na na JAKIKR010000017.1 = NZ_JAKIKR010000017.1 Primary Assembly 88923 na contig00018 unplaced-scaffold na na JAKIKR010000018.1 = NZ_JAKIKR010000018.1 Primary Assembly 86765 na contig00019 unplaced-scaffold na na JAKIKR010000019.1 = NZ_JAKIKR010000019.1 Primary Assembly 79482 na contig00020 unplaced-scaffold na na JAKIKR010000020.1 = NZ_JAKIKR010000020.1 Primary Assembly 76751 na contig00021 unplaced-scaffold na na JAKIKR010000021.1 = NZ_JAKIKR010000021.1 Primary Assembly 74080 na contig00022 unplaced-scaffold na na JAKIKR010000022.1 = NZ_JAKIKR010000022.1 Primary Assembly 72135 na contig00023 unplaced-scaffold na na JAKIKR010000023.1 = NZ_JAKIKR010000023.1 Primary Assembly 67713 na contig00024 unplaced-scaffold na na JAKIKR010000024.1 = NZ_JAKIKR010000024.1 Primary Assembly 67354 na contig00025 unplaced-scaffold na na JAKIKR010000025.1 = NZ_JAKIKR010000025.1 Primary Assembly 64724 na contig00026 unplaced-scaffold na na JAKIKR010000026.1 = NZ_JAKIKR010000026.1 Primary Assembly 63406 na contig00027 unplaced-scaffold na na JAKIKR010000027.1 = NZ_JAKIKR010000027.1 Primary Assembly 60889 na contig00028 unplaced-scaffold na na JAKIKR010000028.1 = NZ_JAKIKR010000028.1 Primary Assembly 60429 na contig00029 unplaced-scaffold na na JAKIKR010000029.1 = NZ_JAKIKR010000029.1 Primary Assembly 59361 na contig00030 unplaced-scaffold na na JAKIKR010000030.1 = NZ_JAKIKR010000030.1 Primary Assembly 58439 na contig00031 unplaced-scaffold na na JAKIKR010000031.1 = NZ_JAKIKR010000031.1 Primary Assembly 57083 na contig00032 unplaced-scaffold na na JAKIKR010000032.1 = NZ_JAKIKR010000032.1 Primary Assembly 56249 na contig00033 unplaced-scaffold na na JAKIKR010000033.1 = NZ_JAKIKR010000033.1 Primary Assembly 55757 na contig00034 unplaced-scaffold na na JAKIKR010000034.1 = NZ_JAKIKR010000034.1 Primary Assembly 53197 na contig00035 unplaced-scaffold na na JAKIKR010000035.1 = NZ_JAKIKR010000035.1 Primary Assembly 52576 na contig00036 unplaced-scaffold na na JAKIKR010000036.1 = NZ_JAKIKR010000036.1 Primary Assembly 51888 na contig00037 unplaced-scaffold na na JAKIKR010000037.1 = NZ_JAKIKR010000037.1 Primary Assembly 51727 na contig00038 unplaced-scaffold na na JAKIKR010000038.1 = NZ_JAKIKR010000038.1 Primary Assembly 49969 na contig00039 unplaced-scaffold na na JAKIKR010000039.1 = NZ_JAKIKR010000039.1 Primary Assembly 48754 na contig00040 unplaced-scaffold na na JAKIKR010000040.1 = NZ_JAKIKR010000040.1 Primary Assembly 47191 na contig00041 unplaced-scaffold na na JAKIKR010000041.1 = NZ_JAKIKR010000041.1 Primary Assembly 47171 na contig00042 unplaced-scaffold na na JAKIKR010000042.1 = NZ_JAKIKR010000042.1 Primary Assembly 47143 na contig00043 unplaced-scaffold na na JAKIKR010000043.1 = NZ_JAKIKR010000043.1 Primary Assembly 43248 na contig00044 unplaced-scaffold na na JAKIKR010000044.1 = NZ_JAKIKR010000044.1 Primary Assembly 43100 na contig00045 unplaced-scaffold na na JAKIKR010000045.1 = NZ_JAKIKR010000045.1 Primary Assembly 43035 na contig00046 unplaced-scaffold na na JAKIKR010000046.1 = NZ_JAKIKR010000046.1 Primary Assembly 42846 na contig00047 unplaced-scaffold na na JAKIKR010000047.1 = NZ_JAKIKR010000047.1 Primary Assembly 42246 na contig00048 unplaced-scaffold na na JAKIKR010000048.1 = NZ_JAKIKR010000048.1 Primary Assembly 41469 na contig00049 unplaced-scaffold na na JAKIKR010000049.1 = NZ_JAKIKR010000049.1 Primary Assembly 40094 na contig00050 unplaced-scaffold na na JAKIKR010000050.1 = NZ_JAKIKR010000050.1 Primary Assembly 37393 na contig00051 unplaced-scaffold na na JAKIKR010000051.1 = NZ_JAKIKR010000051.1 Primary Assembly 34348 na contig00052 unplaced-scaffold na na JAKIKR010000052.1 = NZ_JAKIKR010000052.1 Primary Assembly 34321 na contig00053 unplaced-scaffold na na JAKIKR010000053.1 = NZ_JAKIKR010000053.1 Primary Assembly 32686 na contig00054 unplaced-scaffold na na JAKIKR010000054.1 = NZ_JAKIKR010000054.1 Primary Assembly 32335 na contig00055 unplaced-scaffold na na JAKIKR010000055.1 = NZ_JAKIKR010000055.1 Primary Assembly 31967 na contig00056 unplaced-scaffold na na JAKIKR010000056.1 = NZ_JAKIKR010000056.1 Primary Assembly 31290 na contig00057 unplaced-scaffold na na JAKIKR010000057.1 = NZ_JAKIKR010000057.1 Primary Assembly 28568 na contig00058 unplaced-scaffold na na JAKIKR010000058.1 = NZ_JAKIKR010000058.1 Primary Assembly 26997 na contig00059 unplaced-scaffold na na JAKIKR010000059.1 = NZ_JAKIKR010000059.1 Primary Assembly 26628 na contig00060 unplaced-scaffold na na JAKIKR010000060.1 = NZ_JAKIKR010000060.1 Primary Assembly 25909 na contig00061 unplaced-scaffold na na JAKIKR010000061.1 = NZ_JAKIKR010000061.1 Primary Assembly 25495 na contig00062 unplaced-scaffold na na JAKIKR010000062.1 = NZ_JAKIKR010000062.1 Primary Assembly 24564 na contig00063 unplaced-scaffold na na JAKIKR010000063.1 = NZ_JAKIKR010000063.1 Primary Assembly 23877 na contig00064 unplaced-scaffold na na JAKIKR010000064.1 = NZ_JAKIKR010000064.1 Primary Assembly 23315 na contig00065 unplaced-scaffold na na JAKIKR010000065.1 = NZ_JAKIKR010000065.1 Primary Assembly 22314 na contig00066 unplaced-scaffold na na JAKIKR010000066.1 = NZ_JAKIKR010000066.1 Primary Assembly 22160 na contig00067 unplaced-scaffold na na JAKIKR010000067.1 = NZ_JAKIKR010000067.1 Primary Assembly 21605 na contig00068 unplaced-scaffold na na JAKIKR010000068.1 = NZ_JAKIKR010000068.1 Primary Assembly 18752 na contig00069 unplaced-scaffold na na JAKIKR010000069.1 = NZ_JAKIKR010000069.1 Primary Assembly 18078 na contig00070 unplaced-scaffold na na JAKIKR010000070.1 = NZ_JAKIKR010000070.1 Primary Assembly 18056 na contig00071 unplaced-scaffold na na JAKIKR010000071.1 = NZ_JAKIKR010000071.1 Primary Assembly 17885 na contig00072 unplaced-scaffold na na JAKIKR010000072.1 = NZ_JAKIKR010000072.1 Primary Assembly 17571 na contig00073 unplaced-scaffold na na JAKIKR010000073.1 = NZ_JAKIKR010000073.1 Primary Assembly 16741 na contig00074 unplaced-scaffold na na JAKIKR010000074.1 = NZ_JAKIKR010000074.1 Primary Assembly 16515 na contig00075 unplaced-scaffold na na JAKIKR010000075.1 = NZ_JAKIKR010000075.1 Primary Assembly 15656 na contig00076 unplaced-scaffold na na JAKIKR010000076.1 = NZ_JAKIKR010000076.1 Primary Assembly 15326 na contig00077 unplaced-scaffold na na JAKIKR010000077.1 = NZ_JAKIKR010000077.1 Primary Assembly 15288 na contig00078 unplaced-scaffold na na JAKIKR010000078.1 = NZ_JAKIKR010000078.1 Primary Assembly 14963 na contig00079 unplaced-scaffold na na JAKIKR010000079.1 = NZ_JAKIKR010000079.1 Primary Assembly 14852 na contig00080 unplaced-scaffold na na JAKIKR010000080.1 = NZ_JAKIKR010000080.1 Primary Assembly 14303 na contig00081 unplaced-scaffold na na JAKIKR010000081.1 = NZ_JAKIKR010000081.1 Primary Assembly 14299 na contig00082 unplaced-scaffold na na JAKIKR010000082.1 = NZ_JAKIKR010000082.1 Primary Assembly 13971 na contig00083 unplaced-scaffold na na JAKIKR010000083.1 = NZ_JAKIKR010000083.1 Primary Assembly 13642 na contig00084 unplaced-scaffold na na JAKIKR010000084.1 = NZ_JAKIKR010000084.1 Primary Assembly 13588 na contig00085 unplaced-scaffold na na JAKIKR010000085.1 = NZ_JAKIKR010000085.1 Primary Assembly 13399 na contig00086 unplaced-scaffold na na JAKIKR010000086.1 = NZ_JAKIKR010000086.1 Primary Assembly 13281 na contig00087 unplaced-scaffold na na JAKIKR010000087.1 = NZ_JAKIKR010000087.1 Primary Assembly 13271 na contig00088 unplaced-scaffold na na JAKIKR010000088.1 = NZ_JAKIKR010000088.1 Primary Assembly 11628 na contig00089 unplaced-scaffold na na JAKIKR010000089.1 = NZ_JAKIKR010000089.1 Primary Assembly 9830 na contig00090 unplaced-scaffold na na JAKIKR010000090.1 = NZ_JAKIKR010000090.1 Primary Assembly 9799 na contig00091 unplaced-scaffold na na JAKIKR010000091.1 = NZ_JAKIKR010000091.1 Primary Assembly 9243 na contig00092 unplaced-scaffold na na JAKIKR010000092.1 = NZ_JAKIKR010000092.1 Primary Assembly 8736 na contig00093 unplaced-scaffold na na JAKIKR010000093.1 = NZ_JAKIKR010000093.1 Primary Assembly 8460 na contig00094 unplaced-scaffold na na JAKIKR010000094.1 = NZ_JAKIKR010000094.1 Primary Assembly 8347 na contig00095 unplaced-scaffold na na JAKIKR010000095.1 = NZ_JAKIKR010000095.1 Primary Assembly 7958 na contig00096 unplaced-scaffold na na JAKIKR010000096.1 = NZ_JAKIKR010000096.1 Primary Assembly 7818 na contig00097 unplaced-scaffold na na JAKIKR010000097.1 = NZ_JAKIKR010000097.1 Primary Assembly 6309 na contig00098 unplaced-scaffold na na JAKIKR010000098.1 = NZ_JAKIKR010000098.1 Primary Assembly 6252 na contig00099 unplaced-scaffold na na JAKIKR010000099.1 = NZ_JAKIKR010000099.1 Primary Assembly 6157 na contig00100 unplaced-scaffold na na JAKIKR010000100.1 = NZ_JAKIKR010000100.1 Primary Assembly 5794 na contig00101 unplaced-scaffold na na JAKIKR010000101.1 = NZ_JAKIKR010000101.1 Primary Assembly 5477 na contig00102 unplaced-scaffold na na JAKIKR010000102.1 = NZ_JAKIKR010000102.1 Primary Assembly 4813 na contig00103 unplaced-scaffold na na JAKIKR010000103.1 = NZ_JAKIKR010000103.1 Primary Assembly 4723 na contig00104 unplaced-scaffold na na JAKIKR010000104.1 = NZ_JAKIKR010000104.1 Primary Assembly 4086 na contig00105 unplaced-scaffold na na JAKIKR010000105.1 = NZ_JAKIKR010000105.1 Primary Assembly 3497 na contig00106 unplaced-scaffold na na JAKIKR010000106.1 = NZ_JAKIKR010000106.1 Primary Assembly 3063 na contig00107 unplaced-scaffold na na JAKIKR010000107.1 = NZ_JAKIKR010000107.1 Primary Assembly 2802 na contig00108 unplaced-scaffold na na JAKIKR010000108.1 = NZ_JAKIKR010000108.1 Primary Assembly 2687 na contig00109 unplaced-scaffold na na JAKIKR010000109.1 = NZ_JAKIKR010000109.1 Primary Assembly 2430 na contig00110 unplaced-scaffold na na JAKIKR010000110.1 = NZ_JAKIKR010000110.1 Primary Assembly 2284 na contig00111 unplaced-scaffold na na JAKIKR010000111.1 = NZ_JAKIKR010000111.1 Primary Assembly 2212 na contig00112 unplaced-scaffold na na JAKIKR010000112.1 = NZ_JAKIKR010000112.1 Primary Assembly 2188 na contig00113 unplaced-scaffold na na JAKIKR010000113.1 = NZ_JAKIKR010000113.1 Primary Assembly 2103 na contig00114 unplaced-scaffold na na JAKIKR010000114.1 = NZ_JAKIKR010000114.1 Primary Assembly 2015 na contig00115 unplaced-scaffold na na JAKIKR010000115.1 = NZ_JAKIKR010000115.1 Primary Assembly 1914 na contig00116 unplaced-scaffold na na JAKIKR010000116.1 = NZ_JAKIKR010000116.1 Primary Assembly 1858 na contig00117 unplaced-scaffold na na JAKIKR010000117.1 = NZ_JAKIKR010000117.1 Primary Assembly 1825 na contig00118 unplaced-scaffold na na JAKIKR010000118.1 = NZ_JAKIKR010000118.1 Primary Assembly 1453 na contig00119 unplaced-scaffold na na JAKIKR010000119.1 = NZ_JAKIKR010000119.1 Primary Assembly 1343 na contig00120 unplaced-scaffold na na JAKIKR010000120.1 = NZ_JAKIKR010000120.1 Primary Assembly 1101 na contig00121 unplaced-scaffold na na JAKIKR010000121.1 = NZ_JAKIKR010000121.1 Primary Assembly 970 na contig00122 unplaced-scaffold na na JAKIKR010000122.1 = NZ_JAKIKR010000122.1 Primary Assembly 939 na contig00123 unplaced-scaffold na na JAKIKR010000123.1 = NZ_JAKIKR010000123.1 Primary Assembly 872 na contig00124 unplaced-scaffold na na JAKIKR010000124.1 = NZ_JAKIKR010000124.1 Primary Assembly 871 na contig00125 unplaced-scaffold na na JAKIKR010000125.1 = NZ_JAKIKR010000125.1 Primary Assembly 839 na contig00126 unplaced-scaffold na na JAKIKR010000126.1 = NZ_JAKIKR010000126.1 Primary Assembly 814 na contig00127 unplaced-scaffold na na JAKIKR010000127.1 = NZ_JAKIKR010000127.1 Primary Assembly 736 na contig00128 unplaced-scaffold na na JAKIKR010000128.1 = NZ_JAKIKR010000128.1 Primary Assembly 719 na contig00129 unplaced-scaffold na na JAKIKR010000129.1 = NZ_JAKIKR010000129.1 Primary Assembly 703 na contig00130 unplaced-scaffold na na JAKIKR010000130.1 = NZ_JAKIKR010000130.1 Primary Assembly 689 na contig00131 unplaced-scaffold na na JAKIKR010000131.1 = NZ_JAKIKR010000131.1 Primary Assembly 679 na contig00132 unplaced-scaffold na na JAKIKR010000132.1 = NZ_JAKIKR010000132.1 Primary Assembly 668 na contig00133 unplaced-scaffold na na JAKIKR010000133.1 = NZ_JAKIKR010000133.1 Primary Assembly 649 na contig00134 unplaced-scaffold na na JAKIKR010000134.1 = NZ_JAKIKR010000134.1 Primary Assembly 593 na contig00135 unplaced-scaffold na na JAKIKR010000135.1 = NZ_JAKIKR010000135.1 Primary Assembly 562 na contig00136 unplaced-scaffold na na JAKIKR010000136.1 = NZ_JAKIKR010000136.1 Primary Assembly 553 na contig00137 unplaced-scaffold na na JAKIKR010000137.1 = NZ_JAKIKR010000137.1 Primary Assembly 548 na contig00138 unplaced-scaffold na na JAKIKR010000138.1 = NZ_JAKIKR010000138.1 Primary Assembly 539 na contig00139 unplaced-scaffold na na JAKIKR010000139.1 = NZ_JAKIKR010000139.1 Primary Assembly 520 na contig00140 unplaced-scaffold na na JAKIKR010000140.1 = NZ_JAKIKR010000140.1 Primary Assembly 512 na