# Assembly name: ASM2368440v1 # Organism name: Methanococcoides seepicolus (euryarchaeotes) # Infraspecific name: strain=LLY # Taxid: 2828780 # BioSample: SAMN18795806 # BioProject: PRJNA722826 # Submitter: Institute Of Microbiology Chinese Academy of Sciences # Date: 2022-06-08 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAGSOI01 # Assembly method: ABySS v. 1.3.4 # Expected final version: yes # Genome coverage: 303x # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_023684405.1 # RefSeq assembly accession: GCF_023684405.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023684415.1 GCF_023684415.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1 unplaced-scaffold na na JAGSOI010000001.1 = NZ_JAGSOI010000001.1 Primary Assembly 116122 na Scaffold2 unplaced-scaffold na na JAGSOI010000002.1 = NZ_JAGSOI010000002.1 Primary Assembly 99121 na Scaffold3 unplaced-scaffold na na JAGSOI010000003.1 = NZ_JAGSOI010000003.1 Primary Assembly 91615 na Scaffold4 unplaced-scaffold na na JAGSOI010000004.1 = NZ_JAGSOI010000004.1 Primary Assembly 88937 na Scaffold5 unplaced-scaffold na na JAGSOI010000005.1 = NZ_JAGSOI010000005.1 Primary Assembly 85623 na Scaffold6 unplaced-scaffold na na JAGSOI010000006.1 = NZ_JAGSOI010000006.1 Primary Assembly 76248 na Scaffold7 unplaced-scaffold na na JAGSOI010000007.1 = NZ_JAGSOI010000007.1 Primary Assembly 75796 na Scaffold8 unplaced-scaffold na na JAGSOI010000008.1 = NZ_JAGSOI010000008.1 Primary Assembly 68668 na Scaffold9 unplaced-scaffold na na JAGSOI010000009.1 = NZ_JAGSOI010000009.1 Primary Assembly 61146 na Scaffold10 unplaced-scaffold na na JAGSOI010000010.1 = NZ_JAGSOI010000010.1 Primary Assembly 60712 na Scaffold11 unplaced-scaffold na na JAGSOI010000011.1 = NZ_JAGSOI010000011.1 Primary Assembly 53953 na Scaffold12 unplaced-scaffold na na JAGSOI010000012.1 = NZ_JAGSOI010000012.1 Primary Assembly 47774 na Scaffold13 unplaced-scaffold na na JAGSOI010000013.1 = NZ_JAGSOI010000013.1 Primary Assembly 45435 na Scaffold14 unplaced-scaffold na na JAGSOI010000014.1 = NZ_JAGSOI010000014.1 Primary Assembly 44995 na Scaffold15 unplaced-scaffold na na JAGSOI010000015.1 = NZ_JAGSOI010000015.1 Primary Assembly 44247 na Scaffold16 unplaced-scaffold na na JAGSOI010000016.1 = NZ_JAGSOI010000016.1 Primary Assembly 41982 na Scaffold17 unplaced-scaffold na na JAGSOI010000017.1 = NZ_JAGSOI010000017.1 Primary Assembly 41519 na Scaffold18 unplaced-scaffold na na JAGSOI010000018.1 = NZ_JAGSOI010000018.1 Primary Assembly 41435 na Scaffold19 unplaced-scaffold na na JAGSOI010000019.1 = NZ_JAGSOI010000019.1 Primary Assembly 40546 na Scaffold20 unplaced-scaffold na na JAGSOI010000020.1 = NZ_JAGSOI010000020.1 Primary Assembly 40510 na Scaffold21 unplaced-scaffold na na JAGSOI010000021.1 = NZ_JAGSOI010000021.1 Primary Assembly 37307 na Scaffold22 unplaced-scaffold na na JAGSOI010000022.1 = NZ_JAGSOI010000022.1 Primary Assembly 36672 na Scaffold23 unplaced-scaffold na na JAGSOI010000023.1 = NZ_JAGSOI010000023.1 Primary Assembly 36264 na Scaffold24 unplaced-scaffold na na JAGSOI010000024.1 = NZ_JAGSOI010000024.1 Primary Assembly 34489 na Scaffold25 unplaced-scaffold na na JAGSOI010000025.1 = NZ_JAGSOI010000025.1 Primary Assembly 34301 na Scaffold26 unplaced-scaffold na na JAGSOI010000026.1 = NZ_JAGSOI010000026.1 Primary Assembly 33458 na Scaffold27 unplaced-scaffold na na JAGSOI010000027.1 = NZ_JAGSOI010000027.1 Primary Assembly 32297 na Scaffold28 unplaced-scaffold na na JAGSOI010000028.1 = NZ_JAGSOI010000028.1 Primary Assembly 31830 na Scaffold29 unplaced-scaffold na na JAGSOI010000029.1 = NZ_JAGSOI010000029.1 Primary Assembly 31633 na Scaffold30 unplaced-scaffold na na JAGSOI010000030.1 = NZ_JAGSOI010000030.1 Primary Assembly 31377 na Scaffold31 unplaced-scaffold na na JAGSOI010000031.1 = NZ_JAGSOI010000031.1 Primary Assembly 30944 na Scaffold32 unplaced-scaffold na na JAGSOI010000032.1 = NZ_JAGSOI010000032.1 Primary Assembly 30060 na Scaffold33 unplaced-scaffold na na JAGSOI010000033.1 = NZ_JAGSOI010000033.1 Primary Assembly 30013 na Scaffold34 unplaced-scaffold na na JAGSOI010000034.1 = NZ_JAGSOI010000034.1 Primary Assembly 29229 na Scaffold35 unplaced-scaffold na na JAGSOI010000035.1 = NZ_JAGSOI010000035.1 Primary Assembly 29077 na Scaffold36 unplaced-scaffold na na JAGSOI010000036.1 = NZ_JAGSOI010000036.1 Primary Assembly 28944 na Scaffold37 unplaced-scaffold na na JAGSOI010000037.1 = NZ_JAGSOI010000037.1 Primary Assembly 28071 na Scaffold38 unplaced-scaffold na na JAGSOI010000038.1 = NZ_JAGSOI010000038.1 Primary Assembly 27891 na Scaffold39 unplaced-scaffold na na JAGSOI010000039.1 = NZ_JAGSOI010000039.1 Primary Assembly 27821 na Scaffold40 unplaced-scaffold na na JAGSOI010000040.1 = NZ_JAGSOI010000040.1 Primary Assembly 27548 na Scaffold41 unplaced-scaffold na na JAGSOI010000041.1 = NZ_JAGSOI010000041.1 Primary Assembly 26026 na Scaffold42 unplaced-scaffold na na JAGSOI010000042.1 = NZ_JAGSOI010000042.1 Primary Assembly 25534 na Scaffold43 unplaced-scaffold na na JAGSOI010000043.1 = NZ_JAGSOI010000043.1 Primary Assembly 24933 na Scaffold44 unplaced-scaffold na na JAGSOI010000044.1 = NZ_JAGSOI010000044.1 Primary Assembly 23957 na Scaffold45 unplaced-scaffold na na JAGSOI010000045.1 = NZ_JAGSOI010000045.1 Primary Assembly 21927 na Scaffold46 unplaced-scaffold na na JAGSOI010000046.1 = NZ_JAGSOI010000046.1 Primary Assembly 21564 na Scaffold47 unplaced-scaffold na na JAGSOI010000047.1 = NZ_JAGSOI010000047.1 Primary Assembly 20987 na Scaffold48 unplaced-scaffold na na JAGSOI010000048.1 = NZ_JAGSOI010000048.1 Primary Assembly 20945 na Scaffold49 unplaced-scaffold na na JAGSOI010000049.1 = NZ_JAGSOI010000049.1 Primary Assembly 20573 na Scaffold50 unplaced-scaffold na na JAGSOI010000050.1 = NZ_JAGSOI010000050.1 Primary Assembly 20246 na Scaffold51 unplaced-scaffold na na JAGSOI010000051.1 = NZ_JAGSOI010000051.1 Primary Assembly 19585 na Scaffold52 unplaced-scaffold na na JAGSOI010000052.1 = NZ_JAGSOI010000052.1 Primary Assembly 19192 na Scaffold53 unplaced-scaffold na na JAGSOI010000053.1 = NZ_JAGSOI010000053.1 Primary Assembly 18690 na Scaffold54 unplaced-scaffold na na JAGSOI010000054.1 = NZ_JAGSOI010000054.1 Primary Assembly 18431 na Scaffold55 unplaced-scaffold na na JAGSOI010000055.1 = NZ_JAGSOI010000055.1 Primary Assembly 17944 na Scaffold56 unplaced-scaffold na na JAGSOI010000056.1 = NZ_JAGSOI010000056.1 Primary Assembly 17710 na Scaffold57 unplaced-scaffold na na JAGSOI010000057.1 = NZ_JAGSOI010000057.1 Primary Assembly 17591 na Scaffold58 unplaced-scaffold na na JAGSOI010000058.1 = NZ_JAGSOI010000058.1 Primary Assembly 16751 na Scaffold59 unplaced-scaffold na na JAGSOI010000059.1 = NZ_JAGSOI010000059.1 Primary Assembly 16555 na Scaffold60 unplaced-scaffold na na JAGSOI010000060.1 = NZ_JAGSOI010000060.1 Primary Assembly 16481 na Scaffold61 unplaced-scaffold na na JAGSOI010000061.1 = NZ_JAGSOI010000061.1 Primary Assembly 15779 na Scaffold62 unplaced-scaffold na na JAGSOI010000062.1 = NZ_JAGSOI010000062.1 Primary Assembly 15564 na Scaffold63 unplaced-scaffold na na JAGSOI010000063.1 = NZ_JAGSOI010000063.1 Primary Assembly 15319 na Scaffold64 unplaced-scaffold na na JAGSOI010000064.1 = NZ_JAGSOI010000064.1 Primary Assembly 15145 na Scaffold65 unplaced-scaffold na na JAGSOI010000065.1 = NZ_JAGSOI010000065.1 Primary Assembly 14898 na Scaffold66 unplaced-scaffold na na JAGSOI010000066.1 = NZ_JAGSOI010000066.1 Primary Assembly 14160 na Scaffold67 unplaced-scaffold na na JAGSOI010000067.1 = NZ_JAGSOI010000067.1 Primary Assembly 14072 na Scaffold68 unplaced-scaffold na na JAGSOI010000068.1 = NZ_JAGSOI010000068.1 Primary Assembly 13490 na Scaffold69 unplaced-scaffold na na JAGSOI010000069.1 = NZ_JAGSOI010000069.1 Primary Assembly 12965 na Scaffold70 unplaced-scaffold na na JAGSOI010000070.1 = NZ_JAGSOI010000070.1 Primary Assembly 12526 na Scaffold71 unplaced-scaffold na na JAGSOI010000071.1 = NZ_JAGSOI010000071.1 Primary Assembly 11541 na Scaffold72 unplaced-scaffold na na JAGSOI010000072.1 = NZ_JAGSOI010000072.1 Primary Assembly 11213 na Scaffold73 unplaced-scaffold na na JAGSOI010000073.1 = NZ_JAGSOI010000073.1 Primary Assembly 11021 na Scaffold74 unplaced-scaffold na na JAGSOI010000074.1 = NZ_JAGSOI010000074.1 Primary Assembly 10140 na Scaffold75 unplaced-scaffold na na JAGSOI010000075.1 = NZ_JAGSOI010000075.1 Primary Assembly 10117 na Scaffold76 unplaced-scaffold na na JAGSOI010000076.1 = NZ_JAGSOI010000076.1 Primary Assembly 9942 na Scaffold77 unplaced-scaffold na na JAGSOI010000077.1 = NZ_JAGSOI010000077.1 Primary Assembly 9941 na Scaffold78 unplaced-scaffold na na JAGSOI010000078.1 = NZ_JAGSOI010000078.1 Primary Assembly 9881 na Scaffold79 unplaced-scaffold na na JAGSOI010000079.1 = NZ_JAGSOI010000079.1 Primary Assembly 8757 na Scaffold80 unplaced-scaffold na na JAGSOI010000080.1 = NZ_JAGSOI010000080.1 Primary Assembly 8623 na Scaffold81 unplaced-scaffold na na JAGSOI010000081.1 = NZ_JAGSOI010000081.1 Primary Assembly 8418 na Scaffold82 unplaced-scaffold na na JAGSOI010000082.1 = NZ_JAGSOI010000082.1 Primary Assembly 8176 na Scaffold83 unplaced-scaffold na na JAGSOI010000083.1 = NZ_JAGSOI010000083.1 Primary Assembly 8156 na Scaffold84 unplaced-scaffold na na JAGSOI010000084.1 = NZ_JAGSOI010000084.1 Primary Assembly 7888 na Scaffold85 unplaced-scaffold na na JAGSOI010000085.1 = NZ_JAGSOI010000085.1 Primary Assembly 7203 na Scaffold86 unplaced-scaffold na na JAGSOI010000086.1 = NZ_JAGSOI010000086.1 Primary Assembly 6960 na Scaffold87 unplaced-scaffold na na JAGSOI010000087.1 = NZ_JAGSOI010000087.1 Primary Assembly 6866 na Scaffold88 unplaced-scaffold na na JAGSOI010000088.1 = NZ_JAGSOI010000088.1 Primary Assembly 6830 na Scaffold89 unplaced-scaffold na na JAGSOI010000089.1 = NZ_JAGSOI010000089.1 Primary Assembly 6804 na Scaffold90 unplaced-scaffold na na JAGSOI010000090.1 = NZ_JAGSOI010000090.1 Primary Assembly 6663 na Scaffold91 unplaced-scaffold na na JAGSOI010000091.1 = NZ_JAGSOI010000091.1 Primary Assembly 6571 na Scaffold92 unplaced-scaffold na na JAGSOI010000092.1 = NZ_JAGSOI010000092.1 Primary Assembly 6502 na Scaffold93 unplaced-scaffold na na JAGSOI010000093.1 = NZ_JAGSOI010000093.1 Primary Assembly 6461 na Scaffold94 unplaced-scaffold na na JAGSOI010000094.1 = NZ_JAGSOI010000094.1 Primary Assembly 6300 na Scaffold95 unplaced-scaffold na na JAGSOI010000095.1 = NZ_JAGSOI010000095.1 Primary Assembly 5973 na Scaffold96 unplaced-scaffold na na JAGSOI010000096.1 = NZ_JAGSOI010000096.1 Primary Assembly 5671 na Scaffold97 unplaced-scaffold na na JAGSOI010000097.1 = NZ_JAGSOI010000097.1 Primary Assembly 5450 na Scaffold98 unplaced-scaffold na na JAGSOI010000098.1 = NZ_JAGSOI010000098.1 Primary Assembly 5441 na Scaffold99 unplaced-scaffold na na JAGSOI010000099.1 = NZ_JAGSOI010000099.1 Primary Assembly 5435 na Scaffold100 unplaced-scaffold na na JAGSOI010000100.1 = NZ_JAGSOI010000100.1 Primary Assembly 5359 na Scaffold101 unplaced-scaffold na na JAGSOI010000101.1 = NZ_JAGSOI010000101.1 Primary Assembly 4963 na Scaffold102 unplaced-scaffold na na JAGSOI010000102.1 = NZ_JAGSOI010000102.1 Primary Assembly 4905 na Scaffold103 unplaced-scaffold na na JAGSOI010000103.1 = NZ_JAGSOI010000103.1 Primary Assembly 4789 na Scaffold104 unplaced-scaffold na na JAGSOI010000104.1 = NZ_JAGSOI010000104.1 Primary Assembly 4374 na Scaffold105 unplaced-scaffold na na JAGSOI010000105.1 = NZ_JAGSOI010000105.1 Primary Assembly 4373 na Scaffold106 unplaced-scaffold na na JAGSOI010000106.1 = NZ_JAGSOI010000106.1 Primary Assembly 4180 na Scaffold107 unplaced-scaffold na na JAGSOI010000107.1 = NZ_JAGSOI010000107.1 Primary Assembly 4120 na Scaffold108 unplaced-scaffold na na JAGSOI010000108.1 = NZ_JAGSOI010000108.1 Primary Assembly 3997 na Scaffold109 unplaced-scaffold na na JAGSOI010000109.1 = NZ_JAGSOI010000109.1 Primary Assembly 3933 na Scaffold110 unplaced-scaffold na na JAGSOI010000110.1 = NZ_JAGSOI010000110.1 Primary Assembly 3883 na Scaffold111 unplaced-scaffold na na JAGSOI010000111.1 = NZ_JAGSOI010000111.1 Primary Assembly 3573 na Scaffold112 unplaced-scaffold na na JAGSOI010000112.1 = NZ_JAGSOI010000112.1 Primary Assembly 3427 na Scaffold113 unplaced-scaffold na na JAGSOI010000113.1 = NZ_JAGSOI010000113.1 Primary Assembly 3193 na Scaffold114 unplaced-scaffold na na JAGSOI010000114.1 = NZ_JAGSOI010000114.1 Primary Assembly 3157 na Scaffold115 unplaced-scaffold na na JAGSOI010000115.1 = NZ_JAGSOI010000115.1 Primary Assembly 3151 na Scaffold116 unplaced-scaffold na na JAGSOI010000116.1 = NZ_JAGSOI010000116.1 Primary Assembly 3102 na Scaffold117 unplaced-scaffold na na JAGSOI010000117.1 = NZ_JAGSOI010000117.1 Primary Assembly 2873 na Scaffold118 unplaced-scaffold na na JAGSOI010000118.1 = NZ_JAGSOI010000118.1 Primary Assembly 2841 na Scaffold119 unplaced-scaffold na na JAGSOI010000119.1 = NZ_JAGSOI010000119.1 Primary Assembly 2710 na Scaffold120 unplaced-scaffold na na JAGSOI010000120.1 = NZ_JAGSOI010000120.1 Primary Assembly 2478 na Scaffold121 unplaced-scaffold na na JAGSOI010000121.1 = NZ_JAGSOI010000121.1 Primary Assembly 2474 na Scaffold122 unplaced-scaffold na na JAGSOI010000122.1 = NZ_JAGSOI010000122.1 Primary Assembly 2369 na Scaffold123 unplaced-scaffold na na JAGSOI010000123.1 = NZ_JAGSOI010000123.1 Primary Assembly 2226 na Scaffold124 unplaced-scaffold na na JAGSOI010000124.1 = NZ_JAGSOI010000124.1 Primary Assembly 2131 na Scaffold125 unplaced-scaffold na na JAGSOI010000125.1 = NZ_JAGSOI010000125.1 Primary Assembly 2046 na Scaffold126 unplaced-scaffold na na JAGSOI010000126.1 = NZ_JAGSOI010000126.1 Primary Assembly 1958 na Scaffold127 unplaced-scaffold na na JAGSOI010000127.1 = NZ_JAGSOI010000127.1 Primary Assembly 1869 na Scaffold128 unplaced-scaffold na na JAGSOI010000128.1 = NZ_JAGSOI010000128.1 Primary Assembly 1864 na Scaffold129 unplaced-scaffold na na JAGSOI010000129.1 = NZ_JAGSOI010000129.1 Primary Assembly 1723 na Scaffold130 unplaced-scaffold na na JAGSOI010000130.1 = NZ_JAGSOI010000130.1 Primary Assembly 1671 na Scaffold131 unplaced-scaffold na na JAGSOI010000131.1 = NZ_JAGSOI010000131.1 Primary Assembly 1664 na Scaffold132 unplaced-scaffold na na JAGSOI010000132.1 = NZ_JAGSOI010000132.1 Primary Assembly 1657 na Scaffold133 unplaced-scaffold na na JAGSOI010000133.1 = NZ_JAGSOI010000133.1 Primary Assembly 1609 na Scaffold134 unplaced-scaffold na na JAGSOI010000134.1 = NZ_JAGSOI010000134.1 Primary Assembly 1591 na Scaffold135 unplaced-scaffold na na JAGSOI010000135.1 = NZ_JAGSOI010000135.1 Primary Assembly 1562 na Scaffold136 unplaced-scaffold na na JAGSOI010000136.1 = NZ_JAGSOI010000136.1 Primary Assembly 1494 na Scaffold137 unplaced-scaffold na na JAGSOI010000137.1 = NZ_JAGSOI010000137.1 Primary Assembly 1472 na Scaffold138 unplaced-scaffold na na JAGSOI010000138.1 = NZ_JAGSOI010000138.1 Primary Assembly 1263 na Scaffold139 unplaced-scaffold na na JAGSOI010000139.1 = NZ_JAGSOI010000139.1 Primary Assembly 1246 na Scaffold140 unplaced-scaffold na na JAGSOI010000140.1 = NZ_JAGSOI010000140.1 Primary Assembly 1226 na Scaffold141 unplaced-scaffold na na JAGSOI010000141.1 = NZ_JAGSOI010000141.1 Primary Assembly 1201 na Scaffold142 unplaced-scaffold na na JAGSOI010000142.1 = NZ_JAGSOI010000142.1 Primary Assembly 1198 na Scaffold143 unplaced-scaffold na na JAGSOI010000143.1 = NZ_JAGSOI010000143.1 Primary Assembly 1195 na Scaffold144 unplaced-scaffold na na JAGSOI010000144.1 = NZ_JAGSOI010000144.1 Primary Assembly 1187 na Scaffold145 unplaced-scaffold na na JAGSOI010000145.1 = NZ_JAGSOI010000145.1 Primary Assembly 1182 na Scaffold146 unplaced-scaffold na na JAGSOI010000146.1 = NZ_JAGSOI010000146.1 Primary Assembly 1065 na Scaffold147 unplaced-scaffold na na JAGSOI010000147.1 = NZ_JAGSOI010000147.1 Primary Assembly 1065 na Scaffold148 unplaced-scaffold na na JAGSOI010000148.1 = NZ_JAGSOI010000148.1 Primary Assembly 805 na Scaffold149 unplaced-scaffold na na JAGSOI010000149.1 = NZ_JAGSOI010000149.1 Primary Assembly 769 na Scaffold150 unplaced-scaffold na na JAGSOI010000150.1 = NZ_JAGSOI010000150.1 Primary Assembly 767 na Scaffold151 unplaced-scaffold na na JAGSOI010000151.1 = NZ_JAGSOI010000151.1 Primary Assembly 742 na Scaffold152 unplaced-scaffold na na JAGSOI010000152.1 = NZ_JAGSOI010000152.1 Primary Assembly 711 na Scaffold153 unplaced-scaffold na na JAGSOI010000153.1 = NZ_JAGSOI010000153.1 Primary Assembly 658 na Scaffold154 unplaced-scaffold na na JAGSOI010000154.1 = NZ_JAGSOI010000154.1 Primary Assembly 605 na Scaffold155 unplaced-scaffold na na JAGSOI010000155.1 = NZ_JAGSOI010000155.1 Primary Assembly 569 na Scaffold156 unplaced-scaffold na na JAGSOI010000156.1 = NZ_JAGSOI010000156.1 Primary Assembly 558 na Scaffold157 unplaced-scaffold na na JAGSOI010000157.1 = NZ_JAGSOI010000157.1 Primary Assembly 522 na Scaffold158 unplaced-scaffold na na JAGSOI010000158.1 = NZ_JAGSOI010000158.1 Primary Assembly 511 na