# Assembly name: ASM2370148v1 # Organism name: Aporhodopirellula aestuarii (bacteria) # Infraspecific name: strain=ICT_H3.1 # Taxid: 2950107 # BioSample: SAMN28796953 # BioProject: PRJNA844209 # Submitter: Faculty of Sciencies of University of Porto # Date: 2022-06-09 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAMQBK01 # Assembly method: QIAGEN CLC Genomics Workbench v. March -2022 # Expected final version: yes # Genome coverage: 63.0x # Sequencing technology: Illumina Miseq 600 v3 chemistry # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_023701485.1 # RefSeq assembly accession: GCF_023701485.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_023701495.1 GCF_023701495.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na JAMQBK010000001.1 = NZ_JAMQBK010000001.1 Primary Assembly 105357 na contig_2 unplaced-scaffold na na JAMQBK010000002.1 = NZ_JAMQBK010000002.1 Primary Assembly 169041 na contig_3 unplaced-scaffold na na JAMQBK010000003.1 = NZ_JAMQBK010000003.1 Primary Assembly 1387 na contig_4 unplaced-scaffold na na JAMQBK010000004.1 = NZ_JAMQBK010000004.1 Primary Assembly 46881 na contig_5 unplaced-scaffold na na JAMQBK010000005.1 = NZ_JAMQBK010000005.1 Primary Assembly 6919 na contig_6 unplaced-scaffold na na JAMQBK010000006.1 = NZ_JAMQBK010000006.1 Primary Assembly 73016 na contig_7 unplaced-scaffold na na JAMQBK010000007.1 = NZ_JAMQBK010000007.1 Primary Assembly 47554 na contig_8 unplaced-scaffold na na JAMQBK010000008.1 = NZ_JAMQBK010000008.1 Primary Assembly 330529 na contig_9 unplaced-scaffold na na JAMQBK010000009.1 = NZ_JAMQBK010000009.1 Primary Assembly 63352 na contig_10 unplaced-scaffold na na JAMQBK010000010.1 = NZ_JAMQBK010000010.1 Primary Assembly 5710 na contig_11 unplaced-scaffold na na JAMQBK010000011.1 = NZ_JAMQBK010000011.1 Primary Assembly 81707 na contig_12 unplaced-scaffold na na JAMQBK010000012.1 = NZ_JAMQBK010000012.1 Primary Assembly 141422 na contig_13 unplaced-scaffold na na JAMQBK010000013.1 = NZ_JAMQBK010000013.1 Primary Assembly 109284 na contig_14 unplaced-scaffold na na JAMQBK010000014.1 = NZ_JAMQBK010000014.1 Primary Assembly 194221 na contig_15 unplaced-scaffold na na JAMQBK010000015.1 = NZ_JAMQBK010000015.1 Primary Assembly 137601 na contig_16 unplaced-scaffold na na JAMQBK010000016.1 = NZ_JAMQBK010000016.1 Primary Assembly 172589 na contig_17 unplaced-scaffold na na JAMQBK010000017.1 = NZ_JAMQBK010000017.1 Primary Assembly 106202 na contig_18 unplaced-scaffold na na JAMQBK010000018.1 = NZ_JAMQBK010000018.1 Primary Assembly 53150 na contig_19 unplaced-scaffold na na JAMQBK010000019.1 = NZ_JAMQBK010000019.1 Primary Assembly 10526 na contig_20 unplaced-scaffold na na JAMQBK010000020.1 = NZ_JAMQBK010000020.1 Primary Assembly 75141 na contig_21 unplaced-scaffold na na JAMQBK010000021.1 = NZ_JAMQBK010000021.1 Primary Assembly 131813 na contig_22 unplaced-scaffold na na JAMQBK010000022.1 = NZ_JAMQBK010000022.1 Primary Assembly 97437 na contig_23 unplaced-scaffold na na JAMQBK010000023.1 = NZ_JAMQBK010000023.1 Primary Assembly 196283 na contig_24 unplaced-scaffold na na JAMQBK010000024.1 = NZ_JAMQBK010000024.1 Primary Assembly 306326 na contig_25 unplaced-scaffold na na JAMQBK010000025.1 = NZ_JAMQBK010000025.1 Primary Assembly 93827 na contig_26 unplaced-scaffold na na JAMQBK010000026.1 = NZ_JAMQBK010000026.1 Primary Assembly 4589 na contig_27 unplaced-scaffold na na JAMQBK010000027.1 = NZ_JAMQBK010000027.1 Primary Assembly 48212 na contig_28 unplaced-scaffold na na JAMQBK010000028.1 = NZ_JAMQBK010000028.1 Primary Assembly 91484 na contig_29 unplaced-scaffold na na JAMQBK010000029.1 = NZ_JAMQBK010000029.1 Primary Assembly 289707 na contig_30 unplaced-scaffold na na JAMQBK010000030.1 = NZ_JAMQBK010000030.1 Primary Assembly 44903 na contig_31 unplaced-scaffold na na JAMQBK010000031.1 = NZ_JAMQBK010000031.1 Primary Assembly 291457 na contig_32 unplaced-scaffold na na JAMQBK010000032.1 = NZ_JAMQBK010000032.1 Primary Assembly 84306 na contig_33 unplaced-scaffold na na JAMQBK010000033.1 = NZ_JAMQBK010000033.1 Primary Assembly 1780 na contig_34 unplaced-scaffold na na JAMQBK010000034.1 = NZ_JAMQBK010000034.1 Primary Assembly 6811 na contig_35 unplaced-scaffold na na JAMQBK010000035.1 = NZ_JAMQBK010000035.1 Primary Assembly 75925 na contig_36 unplaced-scaffold na na JAMQBK010000036.1 = NZ_JAMQBK010000036.1 Primary Assembly 198678 na contig_37 unplaced-scaffold na na JAMQBK010000037.1 = NZ_JAMQBK010000037.1 Primary Assembly 18578 na contig_38 unplaced-scaffold na na JAMQBK010000038.1 = NZ_JAMQBK010000038.1 Primary Assembly 62811 na contig_39 unplaced-scaffold na na JAMQBK010000039.1 = NZ_JAMQBK010000039.1 Primary Assembly 490235 na contig_40 unplaced-scaffold na na JAMQBK010000040.1 = NZ_JAMQBK010000040.1 Primary Assembly 21007 na contig_41 unplaced-scaffold na na JAMQBK010000041.1 = NZ_JAMQBK010000041.1 Primary Assembly 42526 na contig_42 unplaced-scaffold na na JAMQBK010000042.1 = NZ_JAMQBK010000042.1 Primary Assembly 105950 na contig_43 unplaced-scaffold na na JAMQBK010000043.1 = NZ_JAMQBK010000043.1 Primary Assembly 135617 na contig_44 unplaced-scaffold na na JAMQBK010000044.1 = NZ_JAMQBK010000044.1 Primary Assembly 61227 na contig_45 unplaced-scaffold na na JAMQBK010000045.1 = NZ_JAMQBK010000045.1 Primary Assembly 23363 na contig_46 unplaced-scaffold na na JAMQBK010000046.1 = NZ_JAMQBK010000046.1 Primary Assembly 159907 na contig_47 unplaced-scaffold na na JAMQBK010000047.1 = NZ_JAMQBK010000047.1 Primary Assembly 61067 na contig_48 unplaced-scaffold na na JAMQBK010000048.1 = NZ_JAMQBK010000048.1 Primary Assembly 54007 na contig_49 unplaced-scaffold na na JAMQBK010000049.1 = NZ_JAMQBK010000049.1 Primary Assembly 113346 na contig_50 unplaced-scaffold na na JAMQBK010000050.1 = NZ_JAMQBK010000050.1 Primary Assembly 54275 na contig_51 unplaced-scaffold na na JAMQBK010000051.1 = NZ_JAMQBK010000051.1 Primary Assembly 110910 na contig_52 unplaced-scaffold na na JAMQBK010000052.1 = NZ_JAMQBK010000052.1 Primary Assembly 38106 na contig_53 unplaced-scaffold na na JAMQBK010000053.1 = NZ_JAMQBK010000053.1 Primary Assembly 10035 na contig_54 unplaced-scaffold na na JAMQBK010000054.1 = NZ_JAMQBK010000054.1 Primary Assembly 46296 na contig_55 unplaced-scaffold na na JAMQBK010000055.1 = NZ_JAMQBK010000055.1 Primary Assembly 33702 na contig_56 unplaced-scaffold na na JAMQBK010000056.1 = NZ_JAMQBK010000056.1 Primary Assembly 27862 na contig_57 unplaced-scaffold na na JAMQBK010000057.1 = NZ_JAMQBK010000057.1 Primary Assembly 101176 na contig_58 unplaced-scaffold na na JAMQBK010000058.1 = NZ_JAMQBK010000058.1 Primary Assembly 44838 na contig_59 unplaced-scaffold na na JAMQBK010000059.1 = NZ_JAMQBK010000059.1 Primary Assembly 107595 na contig_60 unplaced-scaffold na na JAMQBK010000060.1 = NZ_JAMQBK010000060.1 Primary Assembly 554913 na contig_61 unplaced-scaffold na na JAMQBK010000061.1 = NZ_JAMQBK010000061.1 Primary Assembly 49584 na contig_62 unplaced-scaffold na na JAMQBK010000062.1 = NZ_JAMQBK010000062.1 Primary Assembly 205615 na contig_63 unplaced-scaffold na na JAMQBK010000063.1 = NZ_JAMQBK010000063.1 Primary Assembly 117142 na contig_64 unplaced-scaffold na na JAMQBK010000064.1 = NZ_JAMQBK010000064.1 Primary Assembly 22498 na contig_65 unplaced-scaffold na na JAMQBK010000065.1 = NZ_JAMQBK010000065.1 Primary Assembly 134269 na contig_66 unplaced-scaffold na na JAMQBK010000066.1 = NZ_JAMQBK010000066.1 Primary Assembly 46237 na contig_67 unplaced-scaffold na na JAMQBK010000067.1 = NZ_JAMQBK010000067.1 Primary Assembly 21887 na contig_68 unplaced-scaffold na na JAMQBK010000068.1 = NZ_JAMQBK010000068.1 Primary Assembly 29506 na contig_69 unplaced-scaffold na na JAMQBK010000069.1 = NZ_JAMQBK010000069.1 Primary Assembly 2334 na contig_70 unplaced-scaffold na na JAMQBK010000070.1 = NZ_JAMQBK010000070.1 Primary Assembly 11517 na contig_71 unplaced-scaffold na na JAMQBK010000071.1 = NZ_JAMQBK010000071.1 Primary Assembly 35475 na contig_72 unplaced-scaffold na na JAMQBK010000072.1 = NZ_JAMQBK010000072.1 Primary Assembly 3392 na contig_73 unplaced-scaffold na na JAMQBK010000073.1 = NZ_JAMQBK010000073.1 Primary Assembly 67583 na contig_74 unplaced-scaffold na na JAMQBK010000074.1 = NZ_JAMQBK010000074.1 Primary Assembly 33061 na contig_75 unplaced-scaffold na na JAMQBK010000075.1 = NZ_JAMQBK010000075.1 Primary Assembly 12889 na contig_76 unplaced-scaffold na na JAMQBK010000076.1 = NZ_JAMQBK010000076.1 Primary Assembly 1058 na contig_77 unplaced-scaffold na na JAMQBK010000077.1 = NZ_JAMQBK010000077.1 Primary Assembly 15765 na contig_78 unplaced-scaffold na na JAMQBK010000078.1 = NZ_JAMQBK010000078.1 Primary Assembly 190719 na contig_79 unplaced-scaffold na na JAMQBK010000079.1 = NZ_JAMQBK010000079.1 Primary Assembly 48127 na contig_80 unplaced-scaffold na na JAMQBK010000080.1 = NZ_JAMQBK010000080.1 Primary Assembly 14140 na contig_81 unplaced-scaffold na na JAMQBK010000081.1 = NZ_JAMQBK010000081.1 Primary Assembly 144364 na contig_82 unplaced-scaffold na na JAMQBK010000082.1 = NZ_JAMQBK010000082.1 Primary Assembly 50501 na contig_83 unplaced-scaffold na na JAMQBK010000083.1 = NZ_JAMQBK010000083.1 Primary Assembly 174606 na contig_84 unplaced-scaffold na na JAMQBK010000084.1 = NZ_JAMQBK010000084.1 Primary Assembly 62851 na contig_85 unplaced-scaffold na na JAMQBK010000085.1 = NZ_JAMQBK010000085.1 Primary Assembly 34982 na contig_86 unplaced-scaffold na na JAMQBK010000086.1 = NZ_JAMQBK010000086.1 Primary Assembly 43120 na contig_87 unplaced-scaffold na na JAMQBK010000087.1 = NZ_JAMQBK010000087.1 Primary Assembly 11138 na contig_88 unplaced-scaffold na na JAMQBK010000088.1 = NZ_JAMQBK010000088.1 Primary Assembly 72432 na contig_89 unplaced-scaffold na na JAMQBK010000089.1 = NZ_JAMQBK010000089.1 Primary Assembly 14805 na contig_90 unplaced-scaffold na na JAMQBK010000090.1 = NZ_JAMQBK010000090.1 Primary Assembly 31060 na contig_91 unplaced-scaffold na na JAMQBK010000091.1 = NZ_JAMQBK010000091.1 Primary Assembly 2637 na contig_92 unplaced-scaffold na na JAMQBK010000092.1 = NZ_JAMQBK010000092.1 Primary Assembly 39189 na contig_93 unplaced-scaffold na na JAMQBK010000093.1 = NZ_JAMQBK010000093.1 Primary Assembly 9793 na contig_94 unplaced-scaffold na na JAMQBK010000094.1 = NZ_JAMQBK010000094.1 Primary Assembly 2514 na contig_95 unplaced-scaffold na na JAMQBK010000095.1 = NZ_JAMQBK010000095.1 Primary Assembly 44974 na contig_96 unplaced-scaffold na na JAMQBK010000096.1 = NZ_JAMQBK010000096.1 Primary Assembly 74313 na contig_97 unplaced-scaffold na na JAMQBK010000097.1 = NZ_JAMQBK010000097.1 Primary Assembly 81649 na contig_98 unplaced-scaffold na na JAMQBK010000098.1 = NZ_JAMQBK010000098.1 Primary Assembly 1035 na contig_99 unplaced-scaffold na na JAMQBK010000099.1 = NZ_JAMQBK010000099.1 Primary Assembly 9315 na contig_100 unplaced-scaffold na na JAMQBK010000100.1 = NZ_JAMQBK010000100.1 Primary Assembly 32946 na contig_101 unplaced-scaffold na na JAMQBK010000101.1 = NZ_JAMQBK010000101.1 Primary Assembly 1392 na contig_102 unplaced-scaffold na na JAMQBK010000102.1 = NZ_JAMQBK010000102.1 Primary Assembly 1026 na contig_103 unplaced-scaffold na na JAMQBK010000103.1 = NZ_JAMQBK010000103.1 Primary Assembly 3211 na contig_104 unplaced-scaffold na na JAMQBK010000104.1 = NZ_JAMQBK010000104.1 Primary Assembly 73557 na contig_105 unplaced-scaffold na na JAMQBK010000105.1 = NZ_JAMQBK010000105.1 Primary Assembly 17839 na contig_106 unplaced-scaffold na na JAMQBK010000106.1 = NZ_JAMQBK010000106.1 Primary Assembly 8746 na contig_107 unplaced-scaffold na na JAMQBK010000107.1 = NZ_JAMQBK010000107.1 Primary Assembly 10210 na contig_108 unplaced-scaffold na na JAMQBK010000108.1 = NZ_JAMQBK010000108.1 Primary Assembly 4047 na contig_109 unplaced-scaffold na na JAMQBK010000109.1 = NZ_JAMQBK010000109.1 Primary Assembly 4714 na contig_110 unplaced-scaffold na na JAMQBK010000110.1 = NZ_JAMQBK010000110.1 Primary Assembly 5051 na contig_111 unplaced-scaffold na na JAMQBK010000111.1 = NZ_JAMQBK010000111.1 Primary Assembly 3664 na contig_112 unplaced-scaffold na na JAMQBK010000112.1 = NZ_JAMQBK010000112.1 Primary Assembly 62371 na contig_113 unplaced-scaffold na na JAMQBK010000113.1 = NZ_JAMQBK010000113.1 Primary Assembly 13265 na contig_114 unplaced-scaffold na na JAMQBK010000114.1 = NZ_JAMQBK010000114.1 Primary Assembly 8367 na contig_115 unplaced-scaffold na na JAMQBK010000115.1 = NZ_JAMQBK010000115.1 Primary Assembly 1452 na contig_116 unplaced-scaffold na na JAMQBK010000116.1 = NZ_JAMQBK010000116.1 Primary Assembly 22799 na contig_117 unplaced-scaffold na na JAMQBK010000117.1 = NZ_JAMQBK010000117.1 Primary Assembly 37008 na contig_118 unplaced-scaffold na na JAMQBK010000118.1 = NZ_JAMQBK010000118.1 Primary Assembly 40207 na contig_119 unplaced-scaffold na na JAMQBK010000119.1 = NZ_JAMQBK010000119.1 Primary Assembly 8122 na contig_120 unplaced-scaffold na na JAMQBK010000120.1 = NZ_JAMQBK010000120.1 Primary Assembly 16174 na contig_121 unplaced-scaffold na na JAMQBK010000121.1 = NZ_JAMQBK010000121.1 Primary Assembly 2560 na contig_122 unplaced-scaffold na na JAMQBK010000122.1 = NZ_JAMQBK010000122.1 Primary Assembly 32654 na contig_123 unplaced-scaffold na na JAMQBK010000123.1 = NZ_JAMQBK010000123.1 Primary Assembly 13463 na contig_124 unplaced-scaffold na na JAMQBK010000124.1 = NZ_JAMQBK010000124.1 Primary Assembly 18261 na contig_125 unplaced-scaffold na na JAMQBK010000125.1 = NZ_JAMQBK010000125.1 Primary Assembly 1487 na contig_126 unplaced-scaffold na na JAMQBK010000126.1 = NZ_JAMQBK010000126.1 Primary Assembly 17539 na contig_127 unplaced-scaffold na na JAMQBK010000127.1 = NZ_JAMQBK010000127.1 Primary Assembly 14779 na contig_128 unplaced-scaffold na na JAMQBK010000128.1 = NZ_JAMQBK010000128.1 Primary Assembly 4711 na contig_129 unplaced-scaffold na na JAMQBK010000129.1 = NZ_JAMQBK010000129.1 Primary Assembly 5844 na contig_130 unplaced-scaffold na na JAMQBK010000130.1 = NZ_JAMQBK010000130.1 Primary Assembly 5247 na contig_131 unplaced-scaffold na na JAMQBK010000131.1 = NZ_JAMQBK010000131.1 Primary Assembly 1317 na contig_132 unplaced-scaffold na na JAMQBK010000132.1 = NZ_JAMQBK010000132.1 Primary Assembly 20078 na contig_133 unplaced-scaffold na na JAMQBK010000133.1 = NZ_JAMQBK010000133.1 Primary Assembly 33836 na contig_134 unplaced-scaffold na na JAMQBK010000134.1 = NZ_JAMQBK010000134.1 Primary Assembly 17424 na contig_135 unplaced-scaffold na na JAMQBK010000135.1 = NZ_JAMQBK010000135.1 Primary Assembly 1365 na contig_136 unplaced-scaffold na na JAMQBK010000136.1 = NZ_JAMQBK010000136.1 Primary Assembly 5051 na contig_137 unplaced-scaffold na na JAMQBK010000137.1 = NZ_JAMQBK010000137.1 Primary Assembly 9248 na contig_138 unplaced-scaffold na na JAMQBK010000138.1 = NZ_JAMQBK010000138.1 Primary Assembly 7754 na contig_139 unplaced-scaffold na na JAMQBK010000139.1 = NZ_JAMQBK010000139.1 Primary Assembly 5114 na contig_140 unplaced-scaffold na na JAMQBK010000140.1 = NZ_JAMQBK010000140.1 Primary Assembly 12509 na contig_141 unplaced-scaffold na na JAMQBK010000141.1 = NZ_JAMQBK010000141.1 Primary Assembly 31056 na contig_142 unplaced-scaffold na na JAMQBK010000142.1 = NZ_JAMQBK010000142.1 Primary Assembly 2009 na contig_143 unplaced-scaffold na na JAMQBK010000143.1 = NZ_JAMQBK010000143.1 Primary Assembly 1416 na contig_144 unplaced-scaffold na na JAMQBK010000144.1 = NZ_JAMQBK010000144.1 Primary Assembly 2882 na contig_145 unplaced-scaffold na na JAMQBK010000145.1 = NZ_JAMQBK010000145.1 Primary Assembly 8325 na contig_146 unplaced-scaffold na na JAMQBK010000146.1 = NZ_JAMQBK010000146.1 Primary Assembly 6064 na contig_147 unplaced-scaffold na na JAMQBK010000147.1 = NZ_JAMQBK010000147.1 Primary Assembly 3979 na contig_148 unplaced-scaffold na na JAMQBK010000148.1 = NZ_JAMQBK010000148.1 Primary Assembly 5092 na contig_149 unplaced-scaffold na na JAMQBK010000149.1 = NZ_JAMQBK010000149.1 Primary Assembly 3177 na contig_150 unplaced-scaffold na na JAMQBK010000150.1 = NZ_JAMQBK010000150.1 Primary Assembly 1259 na contig_151 unplaced-scaffold na na JAMQBK010000151.1 = NZ_JAMQBK010000151.1 Primary Assembly 1353 na contig_152 unplaced-scaffold na na JAMQBK010000152.1 = NZ_JAMQBK010000152.1 Primary Assembly 11309 na contig_153 unplaced-scaffold na na JAMQBK010000153.1 = NZ_JAMQBK010000153.1 Primary Assembly 4530 na contig_154 unplaced-scaffold na na JAMQBK010000154.1 = NZ_JAMQBK010000154.1 Primary Assembly 1832 na contig_155 unplaced-scaffold na na JAMQBK010000155.1 = NZ_JAMQBK010000155.1 Primary Assembly 1480 na contig_156 unplaced-scaffold na na JAMQBK010000156.1 = NZ_JAMQBK010000156.1 Primary Assembly 3618 na contig_157 unplaced-scaffold na na JAMQBK010000157.1 = NZ_JAMQBK010000157.1 Primary Assembly 1474 na contig_158 unplaced-scaffold na na JAMQBK010000158.1 = NZ_JAMQBK010000158.1 Primary Assembly 1093 na contig_159 unplaced-scaffold na na JAMQBK010000159.1 = NZ_JAMQBK010000159.1 Primary Assembly 13509 na contig_160 unplaced-scaffold na na JAMQBK010000160.1 = NZ_JAMQBK010000160.1 Primary Assembly 2593 na contig_161 unplaced-scaffold na na JAMQBK010000161.1 = NZ_JAMQBK010000161.1 Primary Assembly 2810 na contig_162 unplaced-scaffold na na JAMQBK010000162.1 = NZ_JAMQBK010000162.1 Primary Assembly 3007 na contig_163 unplaced-scaffold na na JAMQBK010000163.1 = NZ_JAMQBK010000163.1 Primary Assembly 2750 na contig_164 unplaced-scaffold na na JAMQBK010000164.1 = NZ_JAMQBK010000164.1 Primary Assembly 5476 na contig_165 unplaced-scaffold na na JAMQBK010000165.1 = NZ_JAMQBK010000165.1 Primary Assembly 1027 na