# Assembly name: ASM2404314v1 # Organism name: Alternaria conjuncta (ascomycete fungi) # Infraspecific name: strain=BMP 0040 # Taxid: 181017 # BioSample: SAMN18144507 # BioProject: PRJNA706766 # Submitter: Cornell University # Date: 2022-06-29 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAFVMB01 # Assembly method: SPAdes v. 1.2 # Expected final version: yes # Genome coverage: 60x # Sequencing technology: Illumina HiSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_024043145.1 # RefSeq assembly accession: GCF_024043145.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_024043605.1 GCF_024043605.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1 unplaced-scaffold na na JAFVMB010000001.1 = NW_026250090.1 Primary Assembly 3173534 na scaffold_10 unplaced-scaffold na na JAFVMB010000010.1 = NW_026250099.1 Primary Assembly 1570767 na scaffold_100 unplaced-scaffold na na JAFVMB010000100.1 = NW_026250189.1 Primary Assembly 1540 na scaffold_101 unplaced-scaffold na na JAFVMB010000101.1 = NW_026250190.1 Primary Assembly 1521 na scaffold_102 unplaced-scaffold na na JAFVMB010000102.1 = NW_026250191.1 Primary Assembly 1519 na scaffold_103 unplaced-scaffold na na JAFVMB010000103.1 = NW_026250192.1 Primary Assembly 1471 na scaffold_104 unplaced-scaffold na na JAFVMB010000104.1 = NW_026250193.1 Primary Assembly 1356 na scaffold_105 unplaced-scaffold na na JAFVMB010000105.1 = NW_026250194.1 Primary Assembly 1335 na scaffold_106 unplaced-scaffold na na JAFVMB010000106.1 = NW_026250195.1 Primary Assembly 1324 na scaffold_107 unplaced-scaffold na na JAFVMB010000107.1 = NW_026250196.1 Primary Assembly 1237 na scaffold_108 unplaced-scaffold na na JAFVMB010000108.1 = NW_026250197.1 Primary Assembly 1215 na scaffold_109 unplaced-scaffold na na JAFVMB010000109.1 = NW_026250198.1 Primary Assembly 1193 na scaffold_11 unplaced-scaffold na na JAFVMB010000011.1 = NW_026250100.1 Primary Assembly 1271701 na scaffold_110 unplaced-scaffold na na JAFVMB010000110.1 = NW_026250199.1 Primary Assembly 1122 na scaffold_111 unplaced-scaffold na na JAFVMB010000111.1 = NW_026250200.1 Primary Assembly 1116 na scaffold_112 unplaced-scaffold na na JAFVMB010000112.1 = NW_026250201.1 Primary Assembly 1113 na scaffold_113 unplaced-scaffold na na JAFVMB010000113.1 = NW_026250202.1 Primary Assembly 1108 na scaffold_114 unplaced-scaffold na na JAFVMB010000114.1 = NW_026250203.1 Primary Assembly 1030 na scaffold_115 unplaced-scaffold na na JAFVMB010000115.1 = NW_026250204.1 Primary Assembly 1021 na scaffold_116 unplaced-scaffold na na JAFVMB010000116.1 = NW_026250205.1 Primary Assembly 986 na scaffold_117 unplaced-scaffold na na JAFVMB010000117.1 = NW_026250206.1 Primary Assembly 944 na scaffold_118 unplaced-scaffold na na JAFVMB010000118.1 = NW_026250207.1 Primary Assembly 915 na scaffold_119 unplaced-scaffold na na JAFVMB010000119.1 = NW_026250208.1 Primary Assembly 892 na scaffold_12 unplaced-scaffold na na JAFVMB010000012.1 = NW_026250101.1 Primary Assembly 1063597 na scaffold_120 unplaced-scaffold na na JAFVMB010000120.1 = NW_026250209.1 Primary Assembly 857 na scaffold_121 unplaced-scaffold na na JAFVMB010000121.1 = NW_026250210.1 Primary Assembly 855 na scaffold_122 unplaced-scaffold na na JAFVMB010000122.1 = NW_026250211.1 Primary Assembly 851 na scaffold_123 unplaced-scaffold na na JAFVMB010000123.1 = NW_026250212.1 Primary Assembly 812 na scaffold_124 unplaced-scaffold na na JAFVMB010000124.1 = NW_026250213.1 Primary Assembly 799 na scaffold_125 unplaced-scaffold na na JAFVMB010000125.1 = NW_026250214.1 Primary Assembly 796 na scaffold_126 unplaced-scaffold na na JAFVMB010000126.1 = NW_026250215.1 Primary Assembly 773 na scaffold_127 unplaced-scaffold na na JAFVMB010000127.1 = NW_026250216.1 Primary Assembly 761 na scaffold_128 unplaced-scaffold na na JAFVMB010000128.1 = NW_026250217.1 Primary Assembly 730 na scaffold_129 unplaced-scaffold na na JAFVMB010000129.1 = NW_026250218.1 Primary Assembly 711 na scaffold_13 unplaced-scaffold na na JAFVMB010000013.1 = NW_026250102.1 Primary Assembly 883076 na scaffold_130 unplaced-scaffold na na JAFVMB010000130.1 = NW_026250219.1 Primary Assembly 701 na scaffold_131 unplaced-scaffold na na JAFVMB010000131.1 = NW_026250220.1 Primary Assembly 697 na scaffold_132 unplaced-scaffold na na JAFVMB010000132.1 = NW_026250221.1 Primary Assembly 693 na scaffold_133 unplaced-scaffold na na JAFVMB010000133.1 = NW_026250222.1 Primary Assembly 689 na scaffold_134 unplaced-scaffold na na JAFVMB010000134.1 = NW_026250223.1 Primary Assembly 683 na scaffold_135 unplaced-scaffold na na JAFVMB010000135.1 = NW_026250224.1 Primary Assembly 682 na scaffold_136 unplaced-scaffold na na JAFVMB010000136.1 = NW_026250225.1 Primary Assembly 680 na scaffold_137 unplaced-scaffold na na JAFVMB010000137.1 = NW_026250226.1 Primary Assembly 680 na scaffold_138 unplaced-scaffold na na JAFVMB010000138.1 = NW_026250227.1 Primary Assembly 667 na scaffold_139 unplaced-scaffold na na JAFVMB010000139.1 = NW_026250228.1 Primary Assembly 660 na scaffold_14 unplaced-scaffold na na JAFVMB010000014.1 = NW_026250103.1 Primary Assembly 879652 na scaffold_140 unplaced-scaffold na na JAFVMB010000140.1 = NW_026250229.1 Primary Assembly 659 na scaffold_141 unplaced-scaffold na na JAFVMB010000141.1 = NW_026250230.1 Primary Assembly 653 na scaffold_142 unplaced-scaffold na na JAFVMB010000142.1 = NW_026250231.1 Primary Assembly 644 na scaffold_143 unplaced-scaffold na na JAFVMB010000143.1 = NW_026250232.1 Primary Assembly 638 na scaffold_144 unplaced-scaffold na na JAFVMB010000144.1 = NW_026250233.1 Primary Assembly 623 na scaffold_145 unplaced-scaffold na na JAFVMB010000145.1 = NW_026250234.1 Primary Assembly 615 na scaffold_146 unplaced-scaffold na na JAFVMB010000146.1 = NW_026250235.1 Primary Assembly 607 na scaffold_147 unplaced-scaffold na na JAFVMB010000147.1 = NW_026250236.1 Primary Assembly 605 na scaffold_148 unplaced-scaffold na na JAFVMB010000148.1 = NW_026250237.1 Primary Assembly 604 na scaffold_149 unplaced-scaffold na na JAFVMB010000149.1 = NW_026250238.1 Primary Assembly 599 na scaffold_15 unplaced-scaffold na na JAFVMB010000015.1 = NW_026250104.1 Primary Assembly 825796 na scaffold_150 unplaced-scaffold na na JAFVMB010000150.1 = NW_026250239.1 Primary Assembly 593 na scaffold_151 unplaced-scaffold na na JAFVMB010000151.1 = NW_026250240.1 Primary Assembly 590 na scaffold_152 unplaced-scaffold na na JAFVMB010000152.1 = NW_026250241.1 Primary Assembly 574 na scaffold_153 unplaced-scaffold na na JAFVMB010000153.1 = NW_026250242.1 Primary Assembly 572 na scaffold_154 unplaced-scaffold na na JAFVMB010000154.1 = NW_026250243.1 Primary Assembly 565 na scaffold_155 unplaced-scaffold na na JAFVMB010000155.1 = NW_026250244.1 Primary Assembly 560 na scaffold_156 unplaced-scaffold na na JAFVMB010000156.1 = NW_026250245.1 Primary Assembly 549 na scaffold_157 unplaced-scaffold na na JAFVMB010000157.1 = NW_026250246.1 Primary Assembly 542 na scaffold_158 unplaced-scaffold na na JAFVMB010000158.1 = NW_026250247.1 Primary Assembly 537 na scaffold_159 unplaced-scaffold na na JAFVMB010000159.1 = NW_026250248.1 Primary Assembly 534 na scaffold_16 unplaced-scaffold na na JAFVMB010000016.1 = NW_026250105.1 Primary Assembly 615164 na scaffold_160 unplaced-scaffold na na JAFVMB010000160.1 = NW_026250249.1 Primary Assembly 531 na scaffold_161 unplaced-scaffold na na JAFVMB010000161.1 = NW_026250250.1 Primary Assembly 529 na scaffold_162 unplaced-scaffold na na JAFVMB010000162.1 = NW_026250251.1 Primary Assembly 528 na scaffold_163 unplaced-scaffold na na JAFVMB010000163.1 = NW_026250252.1 Primary Assembly 527 na scaffold_164 unplaced-scaffold na na JAFVMB010000164.1 = NW_026250253.1 Primary Assembly 526 na scaffold_165 unplaced-scaffold na na JAFVMB010000165.1 = NW_026250254.1 Primary Assembly 524 na scaffold_166 unplaced-scaffold na na JAFVMB010000166.1 = NW_026250255.1 Primary Assembly 524 na scaffold_167 unplaced-scaffold na na JAFVMB010000167.1 = NW_026250256.1 Primary Assembly 523 na scaffold_168 unplaced-scaffold na na JAFVMB010000168.1 = NW_026250257.1 Primary Assembly 521 na scaffold_169 unplaced-scaffold na na JAFVMB010000169.1 = NW_026250258.1 Primary Assembly 517 na scaffold_17 unplaced-scaffold na na JAFVMB010000017.1 = NW_026250106.1 Primary Assembly 612742 na scaffold_170 unplaced-scaffold na na JAFVMB010000170.1 = NW_026250259.1 Primary Assembly 512 na scaffold_171 unplaced-scaffold na na JAFVMB010000171.1 = NW_026250260.1 Primary Assembly 509 na scaffold_172 unplaced-scaffold na na JAFVMB010000172.1 = NW_026250261.1 Primary Assembly 507 na scaffold_173 unplaced-scaffold na na JAFVMB010000173.1 = NW_026250262.1 Primary Assembly 503 na scaffold_174 unplaced-scaffold na na JAFVMB010000174.1 = NW_026250263.1 Primary Assembly 502 na scaffold_175 unplaced-scaffold na na JAFVMB010000175.1 = NW_026250264.1 Primary Assembly 502 na scaffold_18 unplaced-scaffold na na JAFVMB010000018.1 = NW_026250107.1 Primary Assembly 563148 na scaffold_19 unplaced-scaffold na na JAFVMB010000019.1 = NW_026250108.1 Primary Assembly 484422 na scaffold_2 unplaced-scaffold na na JAFVMB010000002.1 = NW_026250091.1 Primary Assembly 2578482 na scaffold_20 unplaced-scaffold na na JAFVMB010000020.1 = NW_026250109.1 Primary Assembly 465056 na scaffold_21 unplaced-scaffold na na JAFVMB010000021.1 = NW_026250110.1 Primary Assembly 427112 na scaffold_22 unplaced-scaffold na na JAFVMB010000022.1 = NW_026250111.1 Primary Assembly 418217 na scaffold_23 unplaced-scaffold na na JAFVMB010000023.1 = NW_026250112.1 Primary Assembly 393404 na scaffold_24 unplaced-scaffold na na JAFVMB010000024.1 = NW_026250113.1 Primary Assembly 377518 na scaffold_25 unplaced-scaffold na na JAFVMB010000025.1 = NW_026250114.1 Primary Assembly 330316 na scaffold_26 unplaced-scaffold na na JAFVMB010000026.1 = NW_026250115.1 Primary Assembly 325873 na scaffold_27 unplaced-scaffold na na JAFVMB010000027.1 = NW_026250116.1 Primary Assembly 285777 na scaffold_28 unplaced-scaffold na na JAFVMB010000028.1 = NW_026250117.1 Primary Assembly 277358 na scaffold_29 unplaced-scaffold na na JAFVMB010000029.1 = NW_026250118.1 Primary Assembly 250933 na scaffold_3 unplaced-scaffold na na JAFVMB010000003.1 = NW_026250092.1 Primary Assembly 2554072 na scaffold_30 unplaced-scaffold na na JAFVMB010000030.1 = NW_026250119.1 Primary Assembly 247750 na scaffold_31 unplaced-scaffold na na JAFVMB010000031.1 = NW_026250120.1 Primary Assembly 228529 na scaffold_32 unplaced-scaffold na na JAFVMB010000032.1 = NW_026250121.1 Primary Assembly 227166 na scaffold_33 unplaced-scaffold na na JAFVMB010000033.1 = NW_026250122.1 Primary Assembly 212253 na scaffold_34 unplaced-scaffold na na JAFVMB010000034.1 = NW_026250123.1 Primary Assembly 207449 na scaffold_35 unplaced-scaffold na na JAFVMB010000035.1 = NW_026250124.1 Primary Assembly 182814 na scaffold_36 unplaced-scaffold na na JAFVMB010000036.1 = NW_026250125.1 Primary Assembly 175228 na scaffold_37 unplaced-scaffold na na JAFVMB010000037.1 = NW_026250126.1 Primary Assembly 164429 na scaffold_38 unplaced-scaffold na na JAFVMB010000038.1 = NW_026250127.1 Primary Assembly 159508 na scaffold_39 unplaced-scaffold na na JAFVMB010000039.1 = NW_026250128.1 Primary Assembly 146249 na scaffold_4 unplaced-scaffold na na JAFVMB010000004.1 = NW_026250093.1 Primary Assembly 2473607 na scaffold_40 unplaced-scaffold na na JAFVMB010000040.1 = NW_026250129.1 Primary Assembly 97854 na scaffold_41 unplaced-scaffold na na JAFVMB010000041.1 = NW_026250130.1 Primary Assembly 76269 na scaffold_42 unplaced-scaffold na na JAFVMB010000042.1 = NW_026250131.1 Primary Assembly 62467 na scaffold_43 unplaced-scaffold na na JAFVMB010000043.1 = NW_026250132.1 Primary Assembly 54687 na scaffold_44 unplaced-scaffold na na JAFVMB010000044.1 = NW_026250133.1 Primary Assembly 47475 na scaffold_45 unplaced-scaffold na na JAFVMB010000045.1 = NW_026250134.1 Primary Assembly 41413 na scaffold_46 unplaced-scaffold na na JAFVMB010000046.1 = NW_026250135.1 Primary Assembly 36516 na scaffold_47 unplaced-scaffold na na JAFVMB010000047.1 = NW_026250136.1 Primary Assembly 35522 na scaffold_48 unplaced-scaffold na na JAFVMB010000048.1 = NW_026250137.1 Primary Assembly 32891 na scaffold_49 unplaced-scaffold na na JAFVMB010000049.1 = NW_026250138.1 Primary Assembly 30704 na scaffold_5 unplaced-scaffold na na JAFVMB010000005.1 = NW_026250094.1 Primary Assembly 2255830 na scaffold_50 unplaced-scaffold na na JAFVMB010000050.1 = NW_026250139.1 Primary Assembly 29053 na scaffold_51 unplaced-scaffold na na JAFVMB010000051.1 = NW_026250140.1 Primary Assembly 28250 na scaffold_52 unplaced-scaffold na na JAFVMB010000052.1 = NW_026250141.1 Primary Assembly 27864 na scaffold_53 unplaced-scaffold na na JAFVMB010000053.1 = NW_026250142.1 Primary Assembly 27350 na scaffold_54 unplaced-scaffold na na JAFVMB010000054.1 = NW_026250143.1 Primary Assembly 26876 na scaffold_55 unplaced-scaffold na na JAFVMB010000055.1 = NW_026250144.1 Primary Assembly 24311 na scaffold_56 unplaced-scaffold na na JAFVMB010000056.1 = NW_026250145.1 Primary Assembly 20338 na scaffold_57 unplaced-scaffold na na JAFVMB010000057.1 = NW_026250146.1 Primary Assembly 18491 na scaffold_58 unplaced-scaffold na na JAFVMB010000058.1 = NW_026250147.1 Primary Assembly 18270 na scaffold_59 unplaced-scaffold na na JAFVMB010000059.1 = NW_026250148.1 Primary Assembly 12832 na scaffold_6 unplaced-scaffold na na JAFVMB010000006.1 = NW_026250095.1 Primary Assembly 2062723 na scaffold_60 unplaced-scaffold na na JAFVMB010000060.1 = NW_026250149.1 Primary Assembly 11160 na scaffold_61 unplaced-scaffold na na JAFVMB010000061.1 = NW_026250150.1 Primary Assembly 9884 na scaffold_62 unplaced-scaffold na na JAFVMB010000062.1 = NW_026250151.1 Primary Assembly 9370 na scaffold_63 unplaced-scaffold na na JAFVMB010000063.1 = NW_026250152.1 Primary Assembly 9326 na scaffold_64 unplaced-scaffold na na JAFVMB010000064.1 = NW_026250153.1 Primary Assembly 9054 na scaffold_65 unplaced-scaffold na na JAFVMB010000065.1 = NW_026250154.1 Primary Assembly 8886 na scaffold_66 unplaced-scaffold na na JAFVMB010000066.1 = NW_026250155.1 Primary Assembly 8203 na scaffold_67 unplaced-scaffold na na JAFVMB010000067.1 = NW_026250156.1 Primary Assembly 7237 na scaffold_68 unplaced-scaffold na na JAFVMB010000068.1 = NW_026250157.1 Primary Assembly 7216 na scaffold_69 unplaced-scaffold na na JAFVMB010000069.1 = NW_026250158.1 Primary Assembly 7097 na scaffold_7 unplaced-scaffold na na JAFVMB010000007.1 = NW_026250096.1 Primary Assembly 2025859 na scaffold_70 unplaced-scaffold na na JAFVMB010000070.1 = NW_026250159.1 Primary Assembly 7096 na scaffold_71 unplaced-scaffold na na JAFVMB010000071.1 = NW_026250160.1 Primary Assembly 6573 na scaffold_72 unplaced-scaffold na na JAFVMB010000072.1 = NW_026250161.1 Primary Assembly 6540 na scaffold_73 unplaced-scaffold na na JAFVMB010000073.1 = NW_026250162.1 Primary Assembly 6469 na scaffold_74 unplaced-scaffold na na JAFVMB010000074.1 = NW_026250163.1 Primary Assembly 6357 na scaffold_75 unplaced-scaffold na na JAFVMB010000075.1 = NW_026250164.1 Primary Assembly 6235 na scaffold_76 unplaced-scaffold na na JAFVMB010000076.1 = NW_026250165.1 Primary Assembly 5817 na scaffold_77 unplaced-scaffold na na JAFVMB010000077.1 = NW_026250166.1 Primary Assembly 5460 na scaffold_78 unplaced-scaffold na na JAFVMB010000078.1 = NW_026250167.1 Primary Assembly 5340 na scaffold_79 unplaced-scaffold na na JAFVMB010000079.1 = NW_026250168.1 Primary Assembly 4200 na scaffold_8 unplaced-scaffold na na JAFVMB010000008.1 = NW_026250097.1 Primary Assembly 1896824 na scaffold_80 unplaced-scaffold na na JAFVMB010000080.1 = NW_026250169.1 Primary Assembly 3907 na scaffold_81 unplaced-scaffold na na JAFVMB010000081.1 = NW_026250170.1 Primary Assembly 3657 na scaffold_82 unplaced-scaffold na na JAFVMB010000082.1 = NW_026250171.1 Primary Assembly 3254 na scaffold_83 unplaced-scaffold na na JAFVMB010000083.1 = NW_026250172.1 Primary Assembly 2675 na scaffold_84 unplaced-scaffold na na JAFVMB010000084.1 = NW_026250173.1 Primary Assembly 2520 na scaffold_85 unplaced-scaffold na na JAFVMB010000085.1 = NW_026250174.1 Primary Assembly 2422 na scaffold_86 unplaced-scaffold na na JAFVMB010000086.1 = NW_026250175.1 Primary Assembly 2158 na scaffold_87 unplaced-scaffold na na JAFVMB010000087.1 = NW_026250176.1 Primary Assembly 2091 na scaffold_88 unplaced-scaffold na na JAFVMB010000088.1 = NW_026250177.1 Primary Assembly 2086 na scaffold_89 unplaced-scaffold na na JAFVMB010000089.1 = NW_026250178.1 Primary Assembly 2063 na scaffold_9 unplaced-scaffold na na JAFVMB010000009.1 = NW_026250098.1 Primary Assembly 1816102 na scaffold_90 unplaced-scaffold na na JAFVMB010000090.1 = NW_026250179.1 Primary Assembly 2034 na scaffold_91 unplaced-scaffold na na JAFVMB010000091.1 = NW_026250180.1 Primary Assembly 1931 na scaffold_92 unplaced-scaffold na na JAFVMB010000092.1 = NW_026250181.1 Primary Assembly 1800 na scaffold_93 unplaced-scaffold na na JAFVMB010000093.1 = NW_026250182.1 Primary Assembly 1730 na scaffold_94 unplaced-scaffold na na JAFVMB010000094.1 = NW_026250183.1 Primary Assembly 1724 na scaffold_95 unplaced-scaffold na na JAFVMB010000095.1 = NW_026250184.1 Primary Assembly 1657 na scaffold_96 unplaced-scaffold na na JAFVMB010000096.1 = NW_026250185.1 Primary Assembly 1617 na scaffold_97 unplaced-scaffold na na JAFVMB010000097.1 = NW_026250186.1 Primary Assembly 1601 na scaffold_98 unplaced-scaffold na na JAFVMB010000098.1 = NW_026250187.1 Primary Assembly 1599 na scaffold_99 unplaced-scaffold na na JAFVMB010000099.1 = NW_026250188.1 Primary Assembly 1560 na