# Assembly name: ilPecGoss1.1 # Organism name: Pectinophora gossypiella (pink bollworm) # Sex: female # Taxid: 13191 # BioSample: SAMN25818887 # BioProject: PRJNA804955 # Submitter: United States Department of Agriculture # Date: 2022-07-22 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAMDNT01 # Assembly method: FALCON v. 1.8.1; FALCON-Unzip v. 1.3.7; purge_dups v. 1.2.5; bwa-mem v. 2.2.1; YaHS v. 1.0; Juicebox v. 1.11.08; Arrow gcpp v. 2.0.2; FreeBayes v. 1.0.2; Merqury v. 1.1 # Expected final version: yes # Genome coverage: 201x # Sequencing technology: PacBio Sequel II CLR; Illumina NovaSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_024362695.1 # RefSeq assembly accession: GCF_024362695.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_024362825.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_024362735.1 GCF_024362735.1 Primary Assembly ## GCF_024532445.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Pgos_1 assembled-molecule 1 Chromosome CM044449.1 = NC_065404.1 Primary Assembly 18615388 na Pgos_2 assembled-molecule 2 Chromosome CM044450.1 = NC_065405.1 Primary Assembly 18383419 na Pgos_3 assembled-molecule 3 Chromosome CM044451.1 = NC_065406.1 Primary Assembly 18144266 na Pgos_4 assembled-molecule 4 Chromosome CM044452.1 = NC_065407.1 Primary Assembly 18118534 na Pgos_5 assembled-molecule 5 Chromosome CM044453.1 = NC_065408.1 Primary Assembly 17778002 na Pgos_6 assembled-molecule 6 Chromosome CM044454.1 = NC_065409.1 Primary Assembly 17669330 na Pgos_7 assembled-molecule 7 Chromosome CM044455.1 = NC_065410.1 Primary Assembly 17536368 na Pgos_8 assembled-molecule 8 Chromosome CM044456.1 = NC_065411.1 Primary Assembly 17481244 na Pgos_9 assembled-molecule 9 Chromosome CM044457.1 = NC_065412.1 Primary Assembly 17110131 na Pgos_10 assembled-molecule 10 Chromosome CM044458.1 = NC_065413.1 Primary Assembly 17075712 na Pgos_11 assembled-molecule 11 Chromosome CM044459.1 = NC_065414.1 Primary Assembly 16879305 na Pgos_12 assembled-molecule 12 Chromosome CM044460.1 = NC_065415.1 Primary Assembly 16702263 na Pgos_13 assembled-molecule 13 Chromosome CM044461.1 = NC_065416.1 Primary Assembly 16434653 na Pgos_14 assembled-molecule 14 Chromosome CM044462.1 = NC_065417.1 Primary Assembly 16224278 na Pgos_15 assembled-molecule 15 Chromosome CM044463.1 = NC_065418.1 Primary Assembly 15937091 na Pgos_16 assembled-molecule 16 Chromosome CM044464.1 = NC_065419.1 Primary Assembly 15823996 na Pgos_17 assembled-molecule 17 Chromosome CM044465.1 = NC_065420.1 Primary Assembly 15342752 na Pgos_18 assembled-molecule 18 Chromosome CM044466.1 = NC_065421.1 Primary Assembly 15112010 na Pgos_19 assembled-molecule 19 Chromosome CM044467.1 = NC_065422.1 Primary Assembly 14148691 na Pgos_20 assembled-molecule 20 Chromosome CM044468.1 = NC_065423.1 Primary Assembly 13719756 na Pgos_21 assembled-molecule 21 Chromosome CM044469.1 = NC_065424.1 Primary Assembly 12296927 na Pgos_22 assembled-molecule 22 Chromosome CM044470.1 = NC_065425.1 Primary Assembly 12226214 na Pgos_23 assembled-molecule 23 Chromosome CM044471.1 = NC_065426.1 Primary Assembly 11259804 na Pgos_24 assembled-molecule 24 Chromosome CM044472.1 = NC_065427.1 Primary Assembly 11160929 na Pgos_25 assembled-molecule 25 Chromosome CM044473.1 = NC_065428.1 Primary Assembly 10742514 na Pgos_26 assembled-molecule 26 Chromosome CM044474.1 = NC_065429.1 Primary Assembly 7822004 na Pgos_27 assembled-molecule 27 Chromosome CM044475.1 = NC_065430.1 Primary Assembly 6805748 na Pgos_28 assembled-molecule 28 Chromosome CM044476.1 = NC_065431.1 Primary Assembly 6792956 na Pgos_29 assembled-molecule 29 Chromosome CM044477.1 = NC_065432.1 Primary Assembly 6475821 na Pgos_0 assembled-molecule Z Chromosome CM044478.1 = NC_065433.1 Primary Assembly 28314428 na Pgos_30 unplaced-scaffold na na JAMDNT010000031.1 = NW_026063240.1 Primary Assembly 1858216 na Pgos_31 unplaced-scaffold na na JAMDNT010000032.1 = NW_026063241.1 Primary Assembly 1395323 na Pgos_32 unplaced-scaffold na na JAMDNT010000033.1 = NW_026063242.1 Primary Assembly 1231526 na Pgos_33 unplaced-scaffold na na JAMDNT010000034.1 = NW_026063243.1 Primary Assembly 1179455 na Pgos_34 unplaced-scaffold na na JAMDNT010000035.1 = NW_026063244.1 Primary Assembly 1102485 na Pgos_35 unplaced-scaffold na na JAMDNT010000036.1 = NW_026063245.1 Primary Assembly 1062195 na Pgos_36 unplaced-scaffold na na JAMDNT010000037.1 = NW_026063246.1 Primary Assembly 1025107 na Pgos_37 unplaced-scaffold na na JAMDNT010000038.1 = NW_026063247.1 Primary Assembly 984380 na Pgos_38 unplaced-scaffold na na JAMDNT010000039.1 = NW_026063248.1 Primary Assembly 833662 na Pgos_39 unplaced-scaffold na na JAMDNT010000040.1 = NW_026063249.1 Primary Assembly 770001 na Pgos_40 unplaced-scaffold na na JAMDNT010000041.1 = NW_026063250.1 Primary Assembly 758642 na Pgos_41 unplaced-scaffold na na JAMDNT010000042.1 = NW_026063251.1 Primary Assembly 757987 na Pgos_42 unplaced-scaffold na na JAMDNT010000043.1 = NW_026063252.1 Primary Assembly 712613 na Pgos_43 unplaced-scaffold na na JAMDNT010000044.1 = NW_026063253.1 Primary Assembly 672657 na Pgos_44 unplaced-scaffold na na JAMDNT010000045.1 = NW_026063254.1 Primary Assembly 666274 na Pgos_45 unplaced-scaffold na na JAMDNT010000046.1 = NW_026063255.1 Primary Assembly 653921 na Pgos_46 unplaced-scaffold na na JAMDNT010000047.1 = NW_026063256.1 Primary Assembly 641815 na Pgos_47 unplaced-scaffold na na JAMDNT010000048.1 = NW_026063257.1 Primary Assembly 588804 na Pgos_48 unplaced-scaffold na na JAMDNT010000049.1 = NW_026063258.1 Primary Assembly 562796 na Pgos_49 unplaced-scaffold na na JAMDNT010000050.1 = NW_026063259.1 Primary Assembly 543429 na Pgos_50 unplaced-scaffold na na JAMDNT010000051.1 = NW_026063260.1 Primary Assembly 485958 na Pgos_51 unplaced-scaffold na na JAMDNT010000052.1 = NW_026063261.1 Primary Assembly 470844 na Pgos_52 unplaced-scaffold na na JAMDNT010000053.1 = NW_026063262.1 Primary Assembly 454433 na Pgos_53 unplaced-scaffold na na JAMDNT010000054.1 = NW_026063263.1 Primary Assembly 447565 na Pgos_54 unplaced-scaffold na na JAMDNT010000055.1 = NW_026063264.1 Primary Assembly 425004 na Pgos_55 unplaced-scaffold na na JAMDNT010000056.1 = NW_026063265.1 Primary Assembly 400675 na Pgos_56 unplaced-scaffold na na JAMDNT010000057.1 = NW_026063266.1 Primary Assembly 375209 na Pgos_57 unplaced-scaffold na na JAMDNT010000058.1 = NW_026063267.1 Primary Assembly 327920 na Pgos_58 unplaced-scaffold na na JAMDNT010000059.1 = NW_026063268.1 Primary Assembly 321838 na Pgos_59 unplaced-scaffold na na JAMDNT010000060.1 = NW_026063269.1 Primary Assembly 320500 na Pgos_60 unplaced-scaffold na na JAMDNT010000061.1 = NW_026063270.1 Primary Assembly 294196 na Pgos_61 unplaced-scaffold na na JAMDNT010000062.1 = NW_026063271.1 Primary Assembly 269010 na Pgos_62 unplaced-scaffold na na JAMDNT010000063.1 = NW_026063272.1 Primary Assembly 236140 na Pgos_63 unplaced-scaffold na na JAMDNT010000064.1 = NW_026063273.1 Primary Assembly 228109 na Pgos_64 unplaced-scaffold na na JAMDNT010000065.1 = NW_026063274.1 Primary Assembly 227040 na Pgos_65 unplaced-scaffold na na JAMDNT010000066.1 = NW_026063275.1 Primary Assembly 223049 na Pgos_66 unplaced-scaffold na na JAMDNT010000067.1 = NW_026063276.1 Primary Assembly 201730 na Pgos_67 unplaced-scaffold na na JAMDNT010000068.1 = NW_026063277.1 Primary Assembly 195438 na Pgos_68 unplaced-scaffold na na JAMDNT010000069.1 = NW_026063278.1 Primary Assembly 190727 na Pgos_69 unplaced-scaffold na na JAMDNT010000070.1 = NW_026063279.1 Primary Assembly 171824 na Pgos_70 unplaced-scaffold na na JAMDNT010000071.1 = NW_026063280.1 Primary Assembly 171275 na Pgos_71 unplaced-scaffold na na JAMDNT010000072.1 = NW_026063281.1 Primary Assembly 147597 na Pgos_72 unplaced-scaffold na na JAMDNT010000073.1 = NW_026063282.1 Primary Assembly 144125 na Pgos_73 unplaced-scaffold na na JAMDNT010000074.1 = NW_026063283.1 Primary Assembly 140289 na Pgos_74 unplaced-scaffold na na JAMDNT010000075.1 = NW_026063284.1 Primary Assembly 139218 na Pgos_75 unplaced-scaffold na na JAMDNT010000076.1 = NW_026063285.1 Primary Assembly 138119 na Pgos_76 unplaced-scaffold na na JAMDNT010000077.1 = NW_026063286.1 Primary Assembly 125025 na Pgos_77 unplaced-scaffold na na JAMDNT010000078.1 = NW_026063287.1 Primary Assembly 124999 na Pgos_78 unplaced-scaffold na na JAMDNT010000079.1 = NW_026063288.1 Primary Assembly 124999 na Pgos_79 unplaced-scaffold na na JAMDNT010000080.1 = NW_026063289.1 Primary Assembly 121824 na Pgos_80 unplaced-scaffold na na JAMDNT010000081.1 = NW_026063290.1 Primary Assembly 111765 na Pgos_81 unplaced-scaffold na na JAMDNT010000082.1 = NW_026063291.1 Primary Assembly 99351 na Pgos_82 unplaced-scaffold na na JAMDNT010000083.1 = NW_026063292.1 Primary Assembly 94422 na Pgos_83 unplaced-scaffold na na JAMDNT010000084.1 = NW_026063293.1 Primary Assembly 85623 na Pgos_84 unplaced-scaffold na na JAMDNT010000085.1 = NW_026063294.1 Primary Assembly 78812 na Pgos_85 unplaced-scaffold na na JAMDNT010000086.1 = NW_026063295.1 Primary Assembly 71849 na Pgos_86 unplaced-scaffold na na JAMDNT010000087.1 = NW_026063296.1 Primary Assembly 66877 na Pgos_87 unplaced-scaffold na na JAMDNT010000088.1 = NW_026063297.1 Primary Assembly 65643 na Pgos_88 unplaced-scaffold na na JAMDNT010000089.1 = NW_026063298.1 Primary Assembly 65632 na Pgos_89 unplaced-scaffold na na JAMDNT010000090.1 = NW_026063299.1 Primary Assembly 60678 na Pgos_90 unplaced-scaffold na na JAMDNT010000091.1 = NW_026063300.1 Primary Assembly 55728 na Pgos_91 unplaced-scaffold na na JAMDNT010000092.1 = NW_026063301.1 Primary Assembly 54568 na Pgos_92 unplaced-scaffold na na JAMDNT010000093.1 = NW_026063302.1 Primary Assembly 53250 na Pgos_93 unplaced-scaffold na na JAMDNT010000094.1 = NW_026063303.1 Primary Assembly 52654 na Pgos_94 unplaced-scaffold na na JAMDNT010000095.1 = NW_026063304.1 Primary Assembly 50001 na Pgos_95 unplaced-scaffold na na JAMDNT010000096.1 = NW_026063305.1 Primary Assembly 49999 na Pgos_96 unplaced-scaffold na na JAMDNT010000097.1 = NW_026063306.1 Primary Assembly 49999 na Pgos_97 unplaced-scaffold na na JAMDNT010000098.1 = NW_026063307.1 Primary Assembly 49999 na Pgos_98 unplaced-scaffold na na JAMDNT010000099.1 = NW_026063308.1 Primary Assembly 49999 na Pgos_99 unplaced-scaffold na na JAMDNT010000100.1 = NW_026063309.1 Primary Assembly 49999 na Pgos_100 unplaced-scaffold na na JAMDNT010000101.1 = NW_026063189.1 Primary Assembly 49999 na Pgos_101 unplaced-scaffold na na JAMDNT010000102.1 = NW_026063190.1 Primary Assembly 49993 na Pgos_102 unplaced-scaffold na na JAMDNT010000103.1 = NW_026063191.1 Primary Assembly 45491 na Pgos_103 unplaced-scaffold na na JAMDNT010000104.1 = NW_026063192.1 Primary Assembly 44421 na Pgos_104 unplaced-scaffold na na JAMDNT010000105.1 = NW_026063193.1 Primary Assembly 40924 na Pgos_105 unplaced-scaffold na na JAMDNT010000106.1 = NW_026063194.1 Primary Assembly 40913 na Pgos_106 unplaced-scaffold na na JAMDNT010000107.1 = NW_026063195.1 Primary Assembly 39480 na Pgos_107 unplaced-scaffold na na JAMDNT010000108.1 = NW_026063196.1 Primary Assembly 38919 na Pgos_108 unplaced-scaffold na na JAMDNT010000109.1 = NW_026063197.1 Primary Assembly 38598 na Pgos_109 unplaced-scaffold na na JAMDNT010000110.1 = NW_026063198.1 Primary Assembly 37867 na Pgos_110 unplaced-scaffold na na JAMDNT010000111.1 = NW_026063199.1 Primary Assembly 37622 na Pgos_111 unplaced-scaffold na na JAMDNT010000112.1 = NW_026063200.1 Primary Assembly 36592 na Pgos_112 unplaced-scaffold na na JAMDNT010000113.1 = NW_026063201.1 Primary Assembly 36090 na Pgos_113 unplaced-scaffold na na JAMDNT010000114.1 = NW_026063202.1 Primary Assembly 33553 na Pgos_114 unplaced-scaffold na na JAMDNT010000115.1 = NW_026063203.1 Primary Assembly 30982 na Pgos_115 unplaced-scaffold na na JAMDNT010000116.1 = NW_026063204.1 Primary Assembly 29191 na Pgos_116 unplaced-scaffold na na JAMDNT010000117.1 = NW_026063205.1 Primary Assembly 29072 na Pgos_117 unplaced-scaffold na na JAMDNT010000118.1 = NW_026063206.1 Primary Assembly 27680 na Pgos_118 unplaced-scaffold na na JAMDNT010000119.1 = NW_026063207.1 Primary Assembly 27147 na Pgos_119 unplaced-scaffold na na JAMDNT010000120.1 = NW_026063208.1 Primary Assembly 27041 na Pgos_120 unplaced-scaffold na na JAMDNT010000121.1 = NW_026063209.1 Primary Assembly 26038 na Pgos_121 unplaced-scaffold na na JAMDNT010000122.1 = NW_026063210.1 Primary Assembly 25774 na Pgos_122 unplaced-scaffold na na JAMDNT010000123.1 = NW_026063211.1 Primary Assembly 25520 na Pgos_123 unplaced-scaffold na na JAMDNT010000124.1 = NW_026063212.1 Primary Assembly 24999 na Pgos_124 unplaced-scaffold na na JAMDNT010000125.1 = NW_026063213.1 Primary Assembly 24999 na Pgos_125 unplaced-scaffold na na JAMDNT010000126.1 = NW_026063214.1 Primary Assembly 24999 na Pgos_126 unplaced-scaffold na na JAMDNT010000127.1 = NW_026063215.1 Primary Assembly 24999 na Pgos_127 unplaced-scaffold na na JAMDNT010000128.1 = NW_026063216.1 Primary Assembly 24999 na Pgos_128 unplaced-scaffold na na JAMDNT010000129.1 = NW_026063217.1 Primary Assembly 24999 na Pgos_129 unplaced-scaffold na na JAMDNT010000130.1 = NW_026063218.1 Primary Assembly 24999 na Pgos_130 unplaced-scaffold na na JAMDNT010000131.1 = NW_026063219.1 Primary Assembly 24999 na Pgos_131 unplaced-scaffold na na JAMDNT010000132.1 = NW_026063220.1 Primary Assembly 24572 na Pgos_132 unplaced-scaffold na na JAMDNT010000133.1 = NW_026063221.1 Primary Assembly 24108 na Pgos_133 unplaced-scaffold na na JAMDNT010000134.1 = NW_026063222.1 Primary Assembly 24056 na Pgos_134 unplaced-scaffold na na JAMDNT010000135.1 = NW_026063223.1 Primary Assembly 23668 na Pgos_135 unplaced-scaffold na na JAMDNT010000136.1 = NW_026063224.1 Primary Assembly 23546 na Pgos_136 unplaced-scaffold na na JAMDNT010000137.1 = NW_026063225.1 Primary Assembly 23297 na Pgos_137 unplaced-scaffold na na JAMDNT010000138.1 = NW_026063226.1 Primary Assembly 23197 na Pgos_138 unplaced-scaffold na na JAMDNT010000139.1 = NW_026063227.1 Primary Assembly 23100 na Pgos_139 unplaced-scaffold na na JAMDNT010000140.1 = NW_026063228.1 Primary Assembly 22431 na Pgos_140 unplaced-scaffold na na JAMDNT010000141.1 = NW_026063229.1 Primary Assembly 21515 na Pgos_141 unplaced-scaffold na na JAMDNT010000142.1 = NW_026063230.1 Primary Assembly 21512 na Pgos_142 unplaced-scaffold na na JAMDNT010000143.1 = NW_026063231.1 Primary Assembly 21157 na Pgos_143 unplaced-scaffold na na JAMDNT010000144.1 = NW_026063232.1 Primary Assembly 20446 na Pgos_144 unplaced-scaffold na na JAMDNT010000145.1 = NW_026063233.1 Primary Assembly 20323 na Pgos_145 unplaced-scaffold na na JAMDNT010000146.1 = NW_026063234.1 Primary Assembly 18884 na Pgos_146 unplaced-scaffold na na JAMDNT010000147.1 = NW_026063235.1 Primary Assembly 16078 na Pgos_147 unplaced-scaffold na na JAMDNT010000148.1 = NW_026063236.1 Primary Assembly 11410 na Pgos_148 unplaced-scaffold na na JAMDNT010000149.1 = NW_026063237.1 Primary Assembly 4999 na Pgos_149 unplaced-scaffold na na JAMDNT010000150.1 = NW_026063238.1 Primary Assembly 4999 na Pgos_150 unplaced-scaffold na na JAMDNT010000151.1 = NW_026063239.1 Primary Assembly 4999 na MT assembled-molecule MT Mitochondrion na <> NC_065403.1 non-nuclear 15202 na