# Assembly name: ASM2471352v2 # Organism name: Acromyrmex echinatior (Panamanian leafcutter ant) # Isolate: Ae372 # Taxid: 103372 # BioSample: SAMN29641506 # BioProject: PRJNA1172379 # Submitter: GAGA # Date: 2025-03-04 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JANHNX02 # Assembly method: Wtdbg2 v. 2.5; SSPACE-LongRead v. 1-1; NextPolish v. 1.3.0; ALLHiC v. 0.9.8 # Expected final version: Yes # Genome coverage: 60.0x # Sequencing technology: PacBio Sequel; Hi-C # RefSeq category: Reference Genome # GenBank assembly accession: GCA_024713525.2 # RefSeq assembly accession: GCF_024713525.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Unit names: ## Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1 assembled-molecule 1 Chromosome CM107724.1 = NC_141852.1 Primary Assembly 28051681 na Scaffold2 assembled-molecule 2 Chromosome CM107725.1 = NC_141853.1 Primary Assembly 26956432 na Scaffold3 assembled-molecule 3 Chromosome CM107726.1 = NC_141854.1 Primary Assembly 24065950 na Scaffold4 assembled-molecule 4 Chromosome CM107727.1 = NC_141855.1 Primary Assembly 17115859 na Scaffold5 assembled-molecule 5 Chromosome CM107728.1 = NC_141856.1 Primary Assembly 16873798 na Scaffold6 assembled-molecule 6 Chromosome CM107729.1 = NC_141857.1 Primary Assembly 16587574 na Scaffold7 assembled-molecule 7 Chromosome CM107730.1 = NC_141858.1 Primary Assembly 15872526 na Scaffold8 assembled-molecule 8 Chromosome CM107731.1 = NC_141859.1 Primary Assembly 15111700 na Scaffold9 assembled-molecule 9 Chromosome CM107732.1 = NC_141860.1 Primary Assembly 14565228 na Scaffold10 assembled-molecule 10 Chromosome CM107733.1 = NC_141861.1 Primary Assembly 14350439 na Scaffold11 assembled-molecule 11 Chromosome CM107734.1 = NC_141862.1 Primary Assembly 14203743 na Scaffold12 assembled-molecule 12 Chromosome CM107735.1 = NC_141863.1 Primary Assembly 13354688 na Scaffold13 assembled-molecule 13 Chromosome CM107736.1 = NC_141864.1 Primary Assembly 13052130 na Scaffold14 assembled-molecule 14 Chromosome CM107737.1 = NC_141865.1 Primary Assembly 11711263 na Scaffold15 assembled-molecule 15 Chromosome CM107738.1 = NC_141866.1 Primary Assembly 10808777 na Scaffold16 assembled-molecule 16 Chromosome CM107739.1 = NC_141867.1 Primary Assembly 10095005 na Scaffold17 assembled-molecule 17 Chromosome CM107740.1 = NC_141868.1 Primary Assembly 9974869 na Scaffold18 assembled-molecule 18 Chromosome CM107741.1 = NC_141869.1 Primary Assembly 8336083 na Scaffold19 assembled-molecule 19 Chromosome CM107742.1 = NC_141870.1 Primary Assembly 7757020 na Scaffold100 unplaced-scaffold na na JANHNX020000003.1 = NW_028259004.1 Primary Assembly 5326 na Scaffold101 unplaced-scaffold na na JANHNX020000004.1 = NW_028259005.1 Primary Assembly 5324 na Scaffold103 unplaced-scaffold na na JANHNX020000005.1 = NW_028259006.1 Primary Assembly 5202 na Scaffold104 unplaced-scaffold na na JANHNX020000006.1 = NW_028259007.1 Primary Assembly 5191 na Scaffold105 unplaced-scaffold na na JANHNX020000007.1 = NW_028259008.1 Primary Assembly 5086 na Scaffold106 unplaced-scaffold na na JANHNX020000008.1 = NW_028259009.1 Primary Assembly 5059 na Scaffold107 unplaced-scaffold na na JANHNX020000009.1 = NW_028259010.1 Primary Assembly 5022 na Scaffold108 unplaced-scaffold na na JANHNX020000010.1 = NW_028259011.1 Primary Assembly 5009 na Scaffold109 unplaced-scaffold na na JANHNX020000011.1 = NW_028259012.1 Primary Assembly 4968 na Scaffold110 unplaced-scaffold na na JANHNX020000013.1 = NW_028259013.1 Primary Assembly 4963 na Scaffold111 unplaced-scaffold na na JANHNX020000014.1 = NW_028259014.1 Primary Assembly 4956 na Scaffold112 unplaced-scaffold na na JANHNX020000015.1 = NW_028259015.1 Primary Assembly 4903 na Scaffold113 unplaced-scaffold na na JANHNX020000016.1 = NW_028259016.1 Primary Assembly 4747 na Scaffold114 unplaced-scaffold na na JANHNX020000017.1 = NW_028259017.1 Primary Assembly 4651 na Scaffold115 unplaced-scaffold na na JANHNX020000018.1 = NW_028259018.1 Primary Assembly 4628 na Scaffold116 unplaced-scaffold na na JANHNX020000019.1 = NW_028259019.1 Primary Assembly 4621 na Scaffold117 unplaced-scaffold na na JANHNX020000020.1 = NW_028259020.1 Primary Assembly 4601 na Scaffold118 unplaced-scaffold na na JANHNX020000021.1 = NW_028259021.1 Primary Assembly 4481 na Scaffold119 unplaced-scaffold na na JANHNX020000022.1 = NW_028259022.1 Primary Assembly 4397 na Scaffold120 unplaced-scaffold na na JANHNX020000024.1 = NW_028259023.1 Primary Assembly 4299 na Scaffold121 unplaced-scaffold na na JANHNX020000025.1 = NW_028259024.1 Primary Assembly 4294 na Scaffold122 unplaced-scaffold na na JANHNX020000026.1 = NW_028259025.1 Primary Assembly 4283 na Scaffold123 unplaced-scaffold na na JANHNX020000027.1 = NW_028259026.1 Primary Assembly 4235 na Scaffold124 unplaced-scaffold na na JANHNX020000028.1 = NW_028259027.1 Primary Assembly 4031 na Scaffold125 unplaced-scaffold na na JANHNX020000029.1 = NW_028259028.1 Primary Assembly 3966 na Scaffold126 unplaced-scaffold na na JANHNX020000030.1 = NW_028259029.1 Primary Assembly 3874 na Scaffold127 unplaced-scaffold na na JANHNX020000031.1 = NW_028259030.1 Primary Assembly 3868 na Scaffold128 unplaced-scaffold na na JANHNX020000032.1 = NW_028259031.1 Primary Assembly 3857 na Scaffold129 unplaced-scaffold na na JANHNX020000033.1 = NW_028259032.1 Primary Assembly 3721 na Scaffold130 unplaced-scaffold na na JANHNX020000035.1 = NW_028259033.1 Primary Assembly 3719 na Scaffold131 unplaced-scaffold na na JANHNX020000036.1 = NW_028259034.1 Primary Assembly 3705 na Scaffold132 unplaced-scaffold na na JANHNX020000037.1 = NW_028259035.1 Primary Assembly 3437 na Scaffold133 unplaced-scaffold na na JANHNX020000038.1 = NW_028259036.1 Primary Assembly 3382 na Scaffold134 unplaced-scaffold na na JANHNX020000039.1 = NW_028259037.1 Primary Assembly 3271 na Scaffold135 unplaced-scaffold na na JANHNX020000040.1 = NW_028259038.1 Primary Assembly 3169 na Scaffold136 unplaced-scaffold na na JANHNX020000041.1 = NW_028259039.1 Primary Assembly 2852 na Scaffold137 unplaced-scaffold na na JANHNX020000042.1 = NW_028259040.1 Primary Assembly 2509 na Scaffold138 unplaced-scaffold na na JANHNX020000043.1 = NW_028259041.1 Primary Assembly 2297 na Scaffold139 unplaced-scaffold na na JANHNX020000044.1 = NW_028259042.1 Primary Assembly 2169 na Scaffold140 unplaced-scaffold na na JANHNX020000046.1 = NW_028259043.1 Primary Assembly 2013 na Scaffold141 unplaced-scaffold na na JANHNX020000047.1 = NW_028259044.1 Primary Assembly 1872 na Scaffold142 unplaced-scaffold na na JANHNX020000048.1 = NW_028259045.1 Primary Assembly 1849 na Scaffold143 unplaced-scaffold na na JANHNX020000049.1 = NW_028259046.1 Primary Assembly 1776 na Scaffold144 unplaced-scaffold na na JANHNX020000050.1 = NW_028259047.1 Primary Assembly 1722 na Scaffold145 unplaced-scaffold na na JANHNX020000051.1 = NW_028259048.1 Primary Assembly 1470 na Scaffold146 unplaced-scaffold na na JANHNX020000052.1 = NW_028259049.1 Primary Assembly 1077 na Scaffold147 unplaced-scaffold na na JANHNX020000053.1 = NW_028259050.1 Primary Assembly 1002 na Scaffold148 unplaced-scaffold na na JANHNX020000054.1 = NW_028259051.1 Primary Assembly 973 na Scaffold149 unplaced-scaffold na na JANHNX020000055.1 = NW_028259052.1 Primary Assembly 919 na Scaffold150 unplaced-scaffold na na JANHNX020000057.1 = NW_028259053.1 Primary Assembly 682 na Scaffold20 unplaced-scaffold na na JANHNX020000063.1 = NW_028259054.1 Primary Assembly 1614885 na Scaffold21 unplaced-scaffold na na JANHNX020000064.1 = NW_028259055.1 Primary Assembly 499986 na Scaffold22 unplaced-scaffold na na JANHNX020000065.1 = NW_028259056.1 Primary Assembly 499962 na Scaffold23 unplaced-scaffold na na JANHNX020000066.1 = NW_028259057.1 Primary Assembly 326794 na Scaffold24 unplaced-scaffold na na JANHNX020000067.1 = NW_028259058.1 Primary Assembly 293974 na Scaffold25 unplaced-scaffold na na JANHNX020000068.1 = NW_028259059.1 Primary Assembly 250012 na Scaffold26 unplaced-scaffold na na JANHNX020000069.1 = NW_028259060.1 Primary Assembly 250002 na Scaffold27 unplaced-scaffold na na JANHNX020000070.1 = NW_028259061.1 Primary Assembly 250000 na Scaffold28 unplaced-scaffold na na JANHNX020000071.1 = NW_028259062.1 Primary Assembly 249942 na Scaffold29 unplaced-scaffold na na JANHNX020000072.1 = NW_028259063.1 Primary Assembly 230695 na Scaffold30 unplaced-scaffold na na JANHNX020000074.1 = NW_028259064.1 Primary Assembly 228535 na Scaffold31 unplaced-scaffold na na JANHNX020000075.1 = NW_028259065.1 Primary Assembly 224788 na Scaffold33 unplaced-scaffold na na JANHNX020000076.1 = NW_028259066.1 Primary Assembly 149122 na Scaffold34 unplaced-scaffold na na JANHNX020000077.1 = NW_028259067.1 Primary Assembly 142434 na Scaffold35 unplaced-scaffold na na JANHNX020000078.1 = NW_028259068.1 Primary Assembly 142304 na Scaffold36 unplaced-scaffold na na JANHNX020000079.1 = NW_028259069.1 Primary Assembly 128112 na Scaffold37 unplaced-scaffold na na JANHNX020000080.1 = NW_028259070.1 Primary Assembly 125000 na Scaffold38 unplaced-scaffold na na JANHNX020000081.1 = NW_028259071.1 Primary Assembly 125000 na Scaffold39 unplaced-scaffold na na JANHNX020000082.1 = NW_028259072.1 Primary Assembly 125000 na Scaffold40 unplaced-scaffold na na JANHNX020000084.1 = NW_028259073.1 Primary Assembly 124941 na Scaffold41 unplaced-scaffold na na JANHNX020000085.1 = NW_028259074.1 Primary Assembly 119383 na Scaffold42 unplaced-scaffold na na JANHNX020000086.1 = NW_028259075.1 Primary Assembly 81277 na Scaffold43 unplaced-scaffold na na JANHNX020000087.1 = NW_028259076.1 Primary Assembly 71407 na Scaffold44 unplaced-scaffold na na JANHNX020000088.1 = NW_028259077.1 Primary Assembly 50000 na Scaffold45 unplaced-scaffold na na JANHNX020000089.1 = NW_028259078.1 Primary Assembly 50000 na Scaffold46 unplaced-scaffold na na JANHNX020000090.1 = NW_028259079.1 Primary Assembly 49974 na Scaffold47 unplaced-scaffold na na JANHNX020000091.1 = NW_028259080.1 Primary Assembly 43689 na Scaffold48 unplaced-scaffold na na JANHNX020000092.1 = NW_028259081.1 Primary Assembly 39356 na Scaffold49 unplaced-scaffold na na JANHNX020000093.1 = NW_028259082.1 Primary Assembly 39050 na Scaffold50 unplaced-scaffold na na JANHNX020000095.1 = NW_028259083.1 Primary Assembly 33324 na Scaffold51 unplaced-scaffold na na JANHNX020000096.1 = NW_028259084.1 Primary Assembly 32903 na Scaffold52 unplaced-scaffold na na JANHNX020000097.1 = NW_028259085.1 Primary Assembly 27517 na Scaffold53 unplaced-scaffold na na JANHNX020000098.1 = NW_028259086.1 Primary Assembly 26480 na Scaffold54 unplaced-scaffold na na JANHNX020000099.1 = NW_028259087.1 Primary Assembly 25065 na Scaffold55 unplaced-scaffold na na JANHNX020000100.1 = NW_028259088.1 Primary Assembly 24018 na Scaffold56 unplaced-scaffold na na JANHNX020000101.1 = NW_028259089.1 Primary Assembly 19587 na Scaffold57 unplaced-scaffold na na JANHNX020000102.1 = NW_028259090.1 Primary Assembly 16807 na Scaffold58 unplaced-scaffold na na JANHNX020000103.1 = NW_028259091.1 Primary Assembly 14109 na Scaffold59 unplaced-scaffold na na JANHNX020000104.1 = NW_028259092.1 Primary Assembly 13928 na Scaffold60 unplaced-scaffold na na JANHNX020000106.1 = NW_028259093.1 Primary Assembly 12196 na Scaffold61 unplaced-scaffold na na JANHNX020000107.1 = NW_028259094.1 Primary Assembly 11835 na Scaffold62 unplaced-scaffold na na JANHNX020000108.1 = NW_028259095.1 Primary Assembly 11723 na Scaffold63 unplaced-scaffold na na JANHNX020000109.1 = NW_028259096.1 Primary Assembly 10076 na Scaffold64 unplaced-scaffold na na JANHNX020000110.1 = NW_028259097.1 Primary Assembly 9846 na Scaffold65 unplaced-scaffold na na JANHNX020000111.1 = NW_028259098.1 Primary Assembly 9557 na Scaffold66 unplaced-scaffold na na JANHNX020000112.1 = NW_028259099.1 Primary Assembly 9306 na Scaffold67 unplaced-scaffold na na JANHNX020000113.1 = NW_028259100.1 Primary Assembly 9278 na Scaffold68 unplaced-scaffold na na JANHNX020000114.1 = NW_028259101.1 Primary Assembly 9259 na Scaffold69 unplaced-scaffold na na JANHNX020000115.1 = NW_028259102.1 Primary Assembly 8327 na Scaffold70 unplaced-scaffold na na JANHNX020000117.1 = NW_028259103.1 Primary Assembly 8112 na Scaffold71 unplaced-scaffold na na JANHNX020000118.1 = NW_028259104.1 Primary Assembly 7706 na Scaffold72 unplaced-scaffold na na JANHNX020000119.1 = NW_028259105.1 Primary Assembly 7645 na Scaffold73 unplaced-scaffold na na JANHNX020000120.1 = NW_028259106.1 Primary Assembly 7364 na Scaffold74 unplaced-scaffold na na JANHNX020000121.1 = NW_028259107.1 Primary Assembly 7358 na Scaffold75 unplaced-scaffold na na JANHNX020000122.1 = NW_028259108.1 Primary Assembly 7186 na Scaffold76 unplaced-scaffold na na JANHNX020000123.1 = NW_028259109.1 Primary Assembly 7120 na Scaffold77 unplaced-scaffold na na JANHNX020000124.1 = NW_028259110.1 Primary Assembly 7000 na Scaffold78 unplaced-scaffold na na JANHNX020000125.1 = NW_028259111.1 Primary Assembly 6997 na Scaffold79 unplaced-scaffold na na JANHNX020000126.1 = NW_028259112.1 Primary Assembly 6988 na Scaffold80 unplaced-scaffold na na JANHNX020000128.1 = NW_028259113.1 Primary Assembly 6951 na Scaffold81 unplaced-scaffold na na JANHNX020000129.1 = NW_028259114.1 Primary Assembly 6866 na Scaffold82 unplaced-scaffold na na JANHNX020000130.1 = NW_028259115.1 Primary Assembly 6708 na Scaffold83 unplaced-scaffold na na JANHNX020000131.1 = NW_028259116.1 Primary Assembly 6577 na Scaffold84 unplaced-scaffold na na JANHNX020000132.1 = NW_028259117.1 Primary Assembly 6400 na Scaffold85 unplaced-scaffold na na JANHNX020000133.1 = NW_028259118.1 Primary Assembly 6363 na Scaffold86 unplaced-scaffold na na JANHNX020000134.1 = NW_028259119.1 Primary Assembly 6294 na Scaffold87 unplaced-scaffold na na JANHNX020000135.1 = NW_028259120.1 Primary Assembly 2284 na Scaffold88 unplaced-scaffold na na JANHNX020000136.1 = NW_028259121.1 Primary Assembly 6226 na Scaffold89 unplaced-scaffold na na JANHNX020000137.1 = NW_028259122.1 Primary Assembly 6170 na Scaffold90 unplaced-scaffold na na JANHNX020000139.1 = NW_028259123.1 Primary Assembly 6068 na Scaffold91 unplaced-scaffold na na JANHNX020000140.1 = NW_028259124.1 Primary Assembly 5996 na Scaffold92 unplaced-scaffold na na JANHNX020000141.1 = NW_028259125.1 Primary Assembly 5897 na Scaffold93 unplaced-scaffold na na JANHNX020000142.1 = NW_028259126.1 Primary Assembly 5845 na Scaffold94 unplaced-scaffold na na JANHNX020000143.1 = NW_028259127.1 Primary Assembly 5844 na Scaffold95 unplaced-scaffold na na JANHNX020000144.1 = NW_028259128.1 Primary Assembly 5721 na Scaffold96 unplaced-scaffold na na JANHNX020000145.1 = NW_028259129.1 Primary Assembly 5706 na Scaffold97 unplaced-scaffold na na JANHNX020000146.1 = NW_028259130.1 Primary Assembly 5616 na Scaffold98 unplaced-scaffold na na JANHNX020000147.1 = NW_028259131.1 Primary Assembly 5432 na Scaffold99 unplaced-scaffold na na JANHNX020000148.1 = NW_028259132.1 Primary Assembly 5364 na