# Assembly name: ASM2565685v1 # Organism name: Shinella yambaruensis (a-proteobacteria) # Infraspecific name: strain=DSM 18801 # Taxid: 415996 # BioSample: SAMN20256440 # BioProject: PRJNA747132 # Submitter: Institute of Medicinal Biotechnology Chinese Academy of Medical Sciences # Date: 2022-10-11 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JALIRQ01 # Assembly method: SOAPdenovo v. July-2010 # Expected final version: no # Genome coverage: 161.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_025656855.1 # RefSeq assembly accession: GCF_025656855.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_025656865.1 GCF_025656865.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1 unplaced-scaffold na na JALIRQ010000001.1 = NZ_JALIRQ010000001.1 Primary Assembly 558329 na Scaffold2 unplaced-scaffold na na JALIRQ010000002.1 = NZ_JALIRQ010000002.1 Primary Assembly 509885 na Scaffold3 unplaced-scaffold na na JALIRQ010000003.1 = NZ_JALIRQ010000003.1 Primary Assembly 504125 na Scaffold4 unplaced-scaffold na na JALIRQ010000004.1 = NZ_JALIRQ010000004.1 Primary Assembly 330120 na Scaffold5 unplaced-scaffold na na JALIRQ010000005.1 = NZ_JALIRQ010000005.1 Primary Assembly 310901 na Scaffold6 unplaced-scaffold na na JALIRQ010000006.1 = NZ_JALIRQ010000006.1 Primary Assembly 307394 na Scaffold7 unplaced-scaffold na na JALIRQ010000007.1 = NZ_JALIRQ010000007.1 Primary Assembly 281563 na Scaffold8 unplaced-scaffold na na JALIRQ010000008.1 = NZ_JALIRQ010000008.1 Primary Assembly 266702 na Scaffold9 unplaced-scaffold na na JALIRQ010000009.1 = NZ_JALIRQ010000009.1 Primary Assembly 247250 na Scaffold10 unplaced-scaffold na na JALIRQ010000010.1 = NZ_JALIRQ010000010.1 Primary Assembly 237938 na Scaffold11 unplaced-scaffold na na JALIRQ010000011.1 = NZ_JALIRQ010000011.1 Primary Assembly 237432 na Scaffold12 unplaced-scaffold na na JALIRQ010000012.1 = NZ_JALIRQ010000012.1 Primary Assembly 212586 na Scaffold13 unplaced-scaffold na na JALIRQ010000013.1 = NZ_JALIRQ010000013.1 Primary Assembly 203690 na Scaffold14 unplaced-scaffold na na JALIRQ010000014.1 = NZ_JALIRQ010000014.1 Primary Assembly 193673 na Scaffold15 unplaced-scaffold na na JALIRQ010000015.1 = NZ_JALIRQ010000015.1 Primary Assembly 190032 na Scaffold16 unplaced-scaffold na na JALIRQ010000016.1 = NZ_JALIRQ010000016.1 Primary Assembly 186725 na Scaffold17 unplaced-scaffold na na JALIRQ010000017.1 = NZ_JALIRQ010000017.1 Primary Assembly 185536 na Scaffold18 unplaced-scaffold na na JALIRQ010000018.1 = NZ_JALIRQ010000018.1 Primary Assembly 183148 na Scaffold19 unplaced-scaffold na na JALIRQ010000019.1 = NZ_JALIRQ010000019.1 Primary Assembly 178303 na Scaffold20 unplaced-scaffold na na JALIRQ010000020.1 = NZ_JALIRQ010000020.1 Primary Assembly 164621 na Scaffold21 unplaced-scaffold na na JALIRQ010000021.1 = NZ_JALIRQ010000021.1 Primary Assembly 145589 na Scaffold22 unplaced-scaffold na na JALIRQ010000022.1 = NZ_JALIRQ010000022.1 Primary Assembly 140653 na Scaffold23 unplaced-scaffold na na JALIRQ010000023.1 = NZ_JALIRQ010000023.1 Primary Assembly 131433 na Scaffold24 unplaced-scaffold na na JALIRQ010000024.1 = NZ_JALIRQ010000024.1 Primary Assembly 113182 na Scaffold25 unplaced-scaffold na na JALIRQ010000025.1 = NZ_JALIRQ010000025.1 Primary Assembly 98618 na Scaffold26 unplaced-scaffold na na JALIRQ010000026.1 = NZ_JALIRQ010000026.1 Primary Assembly 95917 na Scaffold27 unplaced-scaffold na na JALIRQ010000027.1 = NZ_JALIRQ010000027.1 Primary Assembly 87509 na Scaffold28 unplaced-scaffold na na JALIRQ010000028.1 = NZ_JALIRQ010000028.1 Primary Assembly 70780 na Scaffold29 unplaced-scaffold na na JALIRQ010000029.1 = NZ_JALIRQ010000029.1 Primary Assembly 53492 na Scaffold30 unplaced-scaffold na na JALIRQ010000030.1 = NZ_JALIRQ010000030.1 Primary Assembly 43629 na Scaffold31 unplaced-scaffold na na JALIRQ010000031.1 = NZ_JALIRQ010000031.1 Primary Assembly 43589 na Scaffold32 unplaced-scaffold na na JALIRQ010000032.1 = NZ_JALIRQ010000032.1 Primary Assembly 41089 na Scaffold33 unplaced-scaffold na na JALIRQ010000033.1 = NZ_JALIRQ010000033.1 Primary Assembly 40541 na Scaffold34 unplaced-scaffold na na JALIRQ010000034.1 = NZ_JALIRQ010000034.1 Primary Assembly 40306 na Scaffold35 unplaced-scaffold na na JALIRQ010000035.1 = NZ_JALIRQ010000035.1 Primary Assembly 39546 na Scaffold36 unplaced-scaffold na na JALIRQ010000036.1 = NZ_JALIRQ010000036.1 Primary Assembly 38647 na Scaffold37 unplaced-scaffold na na JALIRQ010000037.1 = NZ_JALIRQ010000037.1 Primary Assembly 35060 na Scaffold38 unplaced-scaffold na na JALIRQ010000038.1 = NZ_JALIRQ010000038.1 Primary Assembly 35035 na Scaffold39 unplaced-scaffold na na JALIRQ010000039.1 = NZ_JALIRQ010000039.1 Primary Assembly 34966 na Scaffold40 unplaced-scaffold na na JALIRQ010000040.1 = NZ_JALIRQ010000040.1 Primary Assembly 15612 na Scaffold41 unplaced-scaffold na na JALIRQ010000041.1 = NZ_JALIRQ010000041.1 Primary Assembly 10471 na Scaffold42 unplaced-scaffold na na JALIRQ010000042.1 = NZ_JALIRQ010000042.1 Primary Assembly 6401 na Scaffold43 unplaced-scaffold na na JALIRQ010000043.1 = NZ_JALIRQ010000043.1 Primary Assembly 2876 na Scaffold44 unplaced-scaffold na na JALIRQ010000044.1 = NZ_JALIRQ010000044.1 Primary Assembly 2799 na Scaffold45 unplaced-scaffold na na JALIRQ010000045.1 = NZ_JALIRQ010000045.1 Primary Assembly 2516 na Scaffold46 unplaced-scaffold na na JALIRQ010000046.1 = NZ_JALIRQ010000046.1 Primary Assembly 2499 na Scaffold47 unplaced-scaffold na na JALIRQ010000047.1 = NZ_JALIRQ010000047.1 Primary Assembly 1780 na Scaffold48 unplaced-scaffold na na JALIRQ010000048.1 = NZ_JALIRQ010000048.1 Primary Assembly 1499 na Scaffold49 unplaced-scaffold na na JALIRQ010000049.1 = NZ_JALIRQ010000049.1 Primary Assembly 1140 na Scaffold50 unplaced-scaffold na na JALIRQ010000050.1 = NZ_JALIRQ010000050.1 Primary Assembly 1097 na Scaffold51 unplaced-scaffold na na JALIRQ010000051.1 = NZ_JALIRQ010000051.1 Primary Assembly 1035 na Scaffold52 unplaced-scaffold na na JALIRQ010000052.1 = NZ_JALIRQ010000052.1 Primary Assembly 1027 na Scaffold53 unplaced-scaffold na na JALIRQ010000053.1 = NZ_JALIRQ010000053.1 Primary Assembly 961 na Scaffold54 unplaced-scaffold na na JALIRQ010000054.1 = NZ_JALIRQ010000054.1 Primary Assembly 889 na Scaffold55 unplaced-scaffold na na JALIRQ010000055.1 = NZ_JALIRQ010000055.1 Primary Assembly 859 na Scaffold56 unplaced-scaffold na na JALIRQ010000056.1 = NZ_JALIRQ010000056.1 Primary Assembly 838 na Scaffold57 unplaced-scaffold na na JALIRQ010000057.1 = NZ_JALIRQ010000057.1 Primary Assembly 728 na Scaffold58 unplaced-scaffold na na JALIRQ010000058.1 = NZ_JALIRQ010000058.1 Primary Assembly 669 na Scaffold59 unplaced-scaffold na na JALIRQ010000059.1 = NZ_JALIRQ010000059.1 Primary Assembly 634 na Scaffold60 unplaced-scaffold na na JALIRQ010000060.1 = NZ_JALIRQ010000060.1 Primary Assembly 633 na Scaffold61 unplaced-scaffold na na JALIRQ010000061.1 = NZ_JALIRQ010000061.1 Primary Assembly 575 na Scaffold62 unplaced-scaffold na na JALIRQ010000062.1 = NZ_JALIRQ010000062.1 Primary Assembly 535 na Scaffold63 unplaced-scaffold na na JALIRQ010000063.1 = NZ_JALIRQ010000063.1 Primary Assembly 524 na