# Assembly name: ASM2579183v3 # Organism name: Roseomonas xinghualingensis (a-proteobacteria) # Infraspecific name: strain=SXEYE001 # Taxid: 2986475 # BioSample: SAMN31263517 # BioProject: PRJNA889941 # Submitter: Shanxi Eye Hospital # Date: 2024-10-27 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAOXLP03 # Assembly method: SOAPdenovo v. 2.04 # Expected final version: yes # Genome coverage: 433.66x # Sequencing technology: Illumina NovaSeq # Relation to type material: assembly from type material # GenBank assembly accession: GCA_025791835.3 # RefSeq assembly accession: GCF_025791835.3 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_025791845.3 GCF_025791845.3 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold1_1 unplaced-scaffold na na JAOXLP030000001.1 = NZ_JAOXLP030000001.1 Primary Assembly 649958 na Scaffold2_1 unplaced-scaffold na na JAOXLP030000002.1 = NZ_JAOXLP030000002.1 Primary Assembly 263354 na Scaffold3_1 unplaced-scaffold na na JAOXLP030000003.1 = NZ_JAOXLP030000003.1 Primary Assembly 242713 na Scaffold4_1 unplaced-scaffold na na JAOXLP030000004.1 = NZ_JAOXLP030000004.1 Primary Assembly 228788 na Scaffold5_1 unplaced-scaffold na na JAOXLP030000005.1 = NZ_JAOXLP030000005.1 Primary Assembly 224290 na Scaffold6_1 unplaced-scaffold na na JAOXLP030000006.1 = NZ_JAOXLP030000006.1 Primary Assembly 192950 na Scaffold7_1 unplaced-scaffold na na JAOXLP030000007.1 = NZ_JAOXLP030000007.1 Primary Assembly 178572 na Scaffold8_1 unplaced-scaffold na na JAOXLP030000008.1 = NZ_JAOXLP030000008.1 Primary Assembly 155657 na Scaffold9_1 unplaced-scaffold na na JAOXLP030000009.1 = NZ_JAOXLP030000009.1 Primary Assembly 152841 na Scaffold10_1 unplaced-scaffold na na JAOXLP030000010.1 = NZ_JAOXLP030000010.1 Primary Assembly 145685 na Scaffold11_1 unplaced-scaffold na na JAOXLP030000011.1 = NZ_JAOXLP030000011.1 Primary Assembly 145356 na Scaffold12_1 unplaced-scaffold na na JAOXLP030000012.1 = NZ_JAOXLP030000012.1 Primary Assembly 143403 na Scaffold13_1 unplaced-scaffold na na JAOXLP030000013.1 = NZ_JAOXLP030000013.1 Primary Assembly 104828 na Scaffold14_1 unplaced-scaffold na na JAOXLP030000014.1 = NZ_JAOXLP030000014.1 Primary Assembly 104538 na Scaffold15_1 unplaced-scaffold na na JAOXLP030000015.1 = NZ_JAOXLP030000015.1 Primary Assembly 98905 na Scaffold16_1 unplaced-scaffold na na JAOXLP030000016.1 = NZ_JAOXLP030000016.1 Primary Assembly 98562 na Scaffold17_1 unplaced-scaffold na na JAOXLP030000017.1 = NZ_JAOXLP030000017.1 Primary Assembly 96867 na Scaffold18_1 unplaced-scaffold na na JAOXLP030000018.1 = NZ_JAOXLP030000018.1 Primary Assembly 93442 na Scaffold19_1 unplaced-scaffold na na JAOXLP030000019.1 = NZ_JAOXLP030000019.1 Primary Assembly 82080 na Scaffold20_1 unplaced-scaffold na na JAOXLP030000020.1 = NZ_JAOXLP030000020.1 Primary Assembly 71047 na Scaffold21_1 unplaced-scaffold na na JAOXLP030000021.1 = NZ_JAOXLP030000021.1 Primary Assembly 65179 na Scaffold22_1 unplaced-scaffold na na JAOXLP030000022.1 = NZ_JAOXLP030000022.1 Primary Assembly 54058 na Scaffold23_1 unplaced-scaffold na na JAOXLP030000023.1 = NZ_JAOXLP030000023.1 Primary Assembly 52219 na Scaffold24_1 unplaced-scaffold na na JAOXLP030000024.1 = NZ_JAOXLP030000024.1 Primary Assembly 51881 na Scaffold25_1 unplaced-scaffold na na JAOXLP030000025.1 = NZ_JAOXLP030000025.1 Primary Assembly 48939 na Scaffold26_1 unplaced-scaffold na na JAOXLP030000026.1 = NZ_JAOXLP030000026.1 Primary Assembly 45604 na Scaffold27_1 unplaced-scaffold na na JAOXLP030000027.1 = NZ_JAOXLP030000027.1 Primary Assembly 44269 na Scaffold28_1 unplaced-scaffold na na JAOXLP030000028.1 = NZ_JAOXLP030000028.1 Primary Assembly 43422 na Scaffold29_1 unplaced-scaffold na na JAOXLP030000029.1 = NZ_JAOXLP030000029.1 Primary Assembly 43169 na Scaffold30_1 unplaced-scaffold na na JAOXLP030000030.1 = NZ_JAOXLP030000030.1 Primary Assembly 42683 na Scaffold31_1 unplaced-scaffold na na JAOXLP030000031.1 = NZ_JAOXLP030000031.1 Primary Assembly 3422 na Scaffold31_2 unplaced-scaffold na na JAOXLP030000032.1 = NZ_JAOXLP030000032.1 Primary Assembly 34067 na Scaffold32_1 unplaced-scaffold na na JAOXLP030000033.1 = NZ_JAOXLP030000033.1 Primary Assembly 18670 na Scaffold32_2 unplaced-scaffold na na JAOXLP030000034.1 = NZ_JAOXLP030000034.1 Primary Assembly 16691 na Scaffold33_1 unplaced-scaffold na na JAOXLP030000035.1 = NZ_JAOXLP030000035.1 Primary Assembly 32269 na Scaffold34_1 unplaced-scaffold na na JAOXLP030000036.1 = NZ_JAOXLP030000036.1 Primary Assembly 29264 na Scaffold35_1 unplaced-scaffold na na JAOXLP030000037.1 = NZ_JAOXLP030000037.1 Primary Assembly 28756 na Scaffold36_1 unplaced-scaffold na na JAOXLP030000038.1 = NZ_JAOXLP030000038.1 Primary Assembly 27547 na Scaffold37_1 unplaced-scaffold na na JAOXLP030000039.1 = NZ_JAOXLP030000039.1 Primary Assembly 26847 na Scaffold38_1 unplaced-scaffold na na JAOXLP030000040.1 = NZ_JAOXLP030000040.1 Primary Assembly 26363 na Scaffold39_1 unplaced-scaffold na na JAOXLP030000041.1 = NZ_JAOXLP030000041.1 Primary Assembly 25812 na Scaffold40_1 unplaced-scaffold na na JAOXLP030000042.1 = NZ_JAOXLP030000042.1 Primary Assembly 24760 na Scaffold41_1 unplaced-scaffold na na JAOXLP030000043.1 = NZ_JAOXLP030000043.1 Primary Assembly 23083 na Scaffold42_1 unplaced-scaffold na na JAOXLP030000044.1 = NZ_JAOXLP030000044.1 Primary Assembly 21673 na Scaffold43_1 unplaced-scaffold na na JAOXLP030000045.1 = NZ_JAOXLP030000045.1 Primary Assembly 21496 na Scaffold44_1 unplaced-scaffold na na JAOXLP030000046.1 = NZ_JAOXLP030000046.1 Primary Assembly 21221 na Scaffold45_1 unplaced-scaffold na na JAOXLP030000047.1 = NZ_JAOXLP030000047.1 Primary Assembly 19777 na Scaffold46_1 unplaced-scaffold na na JAOXLP030000048.1 = NZ_JAOXLP030000048.1 Primary Assembly 19690 na Scaffold47_1 unplaced-scaffold na na JAOXLP030000049.1 = NZ_JAOXLP030000049.1 Primary Assembly 19200 na Scaffold48_1 unplaced-scaffold na na JAOXLP030000050.1 = NZ_JAOXLP030000050.1 Primary Assembly 18872 na Scaffold49_1 unplaced-scaffold na na JAOXLP030000051.1 = NZ_JAOXLP030000051.1 Primary Assembly 18818 na Scaffold50_1 unplaced-scaffold na na JAOXLP030000052.1 = NZ_JAOXLP030000052.1 Primary Assembly 18573 na Scaffold51_1 unplaced-scaffold na na JAOXLP030000053.1 = NZ_JAOXLP030000053.1 Primary Assembly 17526 na Scaffold52_1 unplaced-scaffold na na JAOXLP030000054.1 = NZ_JAOXLP030000054.1 Primary Assembly 17498 na Scaffold53_1 unplaced-scaffold na na JAOXLP030000055.1 = NZ_JAOXLP030000055.1 Primary Assembly 16494 na Scaffold54_1 unplaced-scaffold na na JAOXLP030000056.1 = NZ_JAOXLP030000056.1 Primary Assembly 15621 na Scaffold55_1 unplaced-scaffold na na JAOXLP030000057.1 = NZ_JAOXLP030000057.1 Primary Assembly 1222 na Scaffold55_2 unplaced-scaffold na na JAOXLP030000058.1 = NZ_JAOXLP030000058.1 Primary Assembly 13814 na Scaffold56_1 unplaced-scaffold na na JAOXLP030000059.1 = NZ_JAOXLP030000059.1 Primary Assembly 14877 na Scaffold57_1 unplaced-scaffold na na JAOXLP030000060.1 = NZ_JAOXLP030000060.1 Primary Assembly 14118 na Scaffold58_1 unplaced-scaffold na na JAOXLP030000061.1 = NZ_JAOXLP030000061.1 Primary Assembly 13813 na Scaffold59_1 unplaced-scaffold na na JAOXLP030000062.1 = NZ_JAOXLP030000062.1 Primary Assembly 13087 na Scaffold60_1 unplaced-scaffold na na JAOXLP030000063.1 = NZ_JAOXLP030000063.1 Primary Assembly 12760 na Scaffold61_1 unplaced-scaffold na na JAOXLP030000064.1 = NZ_JAOXLP030000064.1 Primary Assembly 11647 na Scaffold62_1 unplaced-scaffold na na JAOXLP030000065.1 = NZ_JAOXLP030000065.1 Primary Assembly 11500 na Scaffold63_1 unplaced-scaffold na na JAOXLP030000066.1 = NZ_JAOXLP030000066.1 Primary Assembly 11482 na Scaffold64_1 unplaced-scaffold na na JAOXLP030000067.1 = NZ_JAOXLP030000067.1 Primary Assembly 9813 na Scaffold65_1 unplaced-scaffold na na JAOXLP030000068.1 = NZ_JAOXLP030000068.1 Primary Assembly 9611 na Scaffold66_1 unplaced-scaffold na na JAOXLP030000069.1 = NZ_JAOXLP030000069.1 Primary Assembly 9316 na Scaffold67_1 unplaced-scaffold na na JAOXLP030000070.1 = NZ_JAOXLP030000070.1 Primary Assembly 8529 na Scaffold68_1 unplaced-scaffold na na JAOXLP030000071.1 = NZ_JAOXLP030000071.1 Primary Assembly 8295 na Scaffold69_1 unplaced-scaffold na na JAOXLP030000072.1 = NZ_JAOXLP030000072.1 Primary Assembly 8251 na Scaffold70_1 unplaced-scaffold na na JAOXLP030000073.1 = NZ_JAOXLP030000073.1 Primary Assembly 8241 na Scaffold71_1 unplaced-scaffold na na JAOXLP030000074.1 = NZ_JAOXLP030000074.1 Primary Assembly 8071 na Scaffold72_1 unplaced-scaffold na na JAOXLP030000075.1 = NZ_JAOXLP030000075.1 Primary Assembly 7863 na Scaffold73_1 unplaced-scaffold na na JAOXLP030000076.1 = NZ_JAOXLP030000076.1 Primary Assembly 7281 na Scaffold74_1 unplaced-scaffold na na JAOXLP030000077.1 = NZ_JAOXLP030000077.1 Primary Assembly 6422 na Scaffold75_1 unplaced-scaffold na na JAOXLP030000078.1 = NZ_JAOXLP030000078.1 Primary Assembly 6364 na Scaffold76_1 unplaced-scaffold na na JAOXLP030000079.1 = NZ_JAOXLP030000079.1 Primary Assembly 6357 na Scaffold77_1 unplaced-scaffold na na JAOXLP030000080.1 = NZ_JAOXLP030000080.1 Primary Assembly 5981 na Scaffold78_1 unplaced-scaffold na na JAOXLP030000081.1 = NZ_JAOXLP030000081.1 Primary Assembly 5920 na Scaffold79_1 unplaced-scaffold na na JAOXLP030000082.1 = NZ_JAOXLP030000082.1 Primary Assembly 5757 na Scaffold80_1 unplaced-scaffold na na JAOXLP030000083.1 = NZ_JAOXLP030000083.1 Primary Assembly 5315 na Scaffold81_1 unplaced-scaffold na na JAOXLP030000084.1 = NZ_JAOXLP030000084.1 Primary Assembly 5005 na Scaffold82_1 unplaced-scaffold na na JAOXLP030000085.1 = NZ_JAOXLP030000085.1 Primary Assembly 4948 na Scaffold83_1 unplaced-scaffold na na JAOXLP030000086.1 = NZ_JAOXLP030000086.1 Primary Assembly 4899 na Scaffold84_1 unplaced-scaffold na na JAOXLP030000087.1 = NZ_JAOXLP030000087.1 Primary Assembly 3693 na Scaffold84_2 unplaced-scaffold na na JAOXLP030000088.1 = NZ_JAOXLP030000088.1 Primary Assembly 981 na Scaffold85_1 unplaced-scaffold na na JAOXLP030000089.1 = NZ_JAOXLP030000089.1 Primary Assembly 4342 na Scaffold86_1 unplaced-scaffold na na JAOXLP030000090.1 = NZ_JAOXLP030000090.1 Primary Assembly 4175 na Scaffold87_1 unplaced-scaffold na na JAOXLP030000091.1 = NZ_JAOXLP030000091.1 Primary Assembly 4121 na Scaffold88_1 unplaced-scaffold na na JAOXLP030000092.1 = NZ_JAOXLP030000092.1 Primary Assembly 3939 na Scaffold89_1 unplaced-scaffold na na JAOXLP030000093.1 = NZ_JAOXLP030000093.1 Primary Assembly 3915 na Scaffold90_1 unplaced-scaffold na na JAOXLP030000094.1 = NZ_JAOXLP030000094.1 Primary Assembly 3571 na Scaffold91_1 unplaced-scaffold na na JAOXLP030000095.1 = NZ_JAOXLP030000095.1 Primary Assembly 3168 na Scaffold92_1 unplaced-scaffold na na JAOXLP030000096.1 = NZ_JAOXLP030000096.1 Primary Assembly 3071 na Scaffold93_1 unplaced-scaffold na na JAOXLP030000097.1 = NZ_JAOXLP030000097.1 Primary Assembly 3009 na Scaffold94_1 unplaced-scaffold na na JAOXLP030000098.1 = NZ_JAOXLP030000098.1 Primary Assembly 2603 na Scaffold95_1 unplaced-scaffold na na JAOXLP030000099.1 = NZ_JAOXLP030000099.1 Primary Assembly 2568 na Scaffold96_1 unplaced-scaffold na na JAOXLP030000100.1 = NZ_JAOXLP030000100.1 Primary Assembly 2293 na Scaffold97_1 unplaced-scaffold na na JAOXLP030000101.1 = NZ_JAOXLP030000101.1 Primary Assembly 2235 na Scaffold98_1 unplaced-scaffold na na JAOXLP030000102.1 = NZ_JAOXLP030000102.1 Primary Assembly 2232 na Scaffold99_1 unplaced-scaffold na na JAOXLP030000103.1 = NZ_JAOXLP030000103.1 Primary Assembly 2196 na Scaffold100_1 unplaced-scaffold na na JAOXLP030000104.1 = NZ_JAOXLP030000104.1 Primary Assembly 2071 na Scaffold101_1 unplaced-scaffold na na JAOXLP030000105.1 = NZ_JAOXLP030000105.1 Primary Assembly 1949 na Scaffold102_1 unplaced-scaffold na na JAOXLP030000106.1 = NZ_JAOXLP030000106.1 Primary Assembly 1886 na Scaffold103_1 unplaced-scaffold na na JAOXLP030000107.1 = NZ_JAOXLP030000107.1 Primary Assembly 1873 na Scaffold104_1 unplaced-scaffold na na JAOXLP030000108.1 = NZ_JAOXLP030000108.1 Primary Assembly 1673 na Scaffold105_1 unplaced-scaffold na na JAOXLP030000109.1 = NZ_JAOXLP030000109.1 Primary Assembly 1624 na Scaffold106_1 unplaced-scaffold na na JAOXLP030000110.1 = NZ_JAOXLP030000110.1 Primary Assembly 1495 na Scaffold107_1 unplaced-scaffold na na JAOXLP030000111.1 = NZ_JAOXLP030000111.1 Primary Assembly 1461 na Scaffold108_1 unplaced-scaffold na na JAOXLP030000112.1 = NZ_JAOXLP030000112.1 Primary Assembly 1456 na Scaffold109_1 unplaced-scaffold na na JAOXLP030000113.1 = NZ_JAOXLP030000113.1 Primary Assembly 1410 na Scaffold110_1 unplaced-scaffold na na JAOXLP030000114.1 = NZ_JAOXLP030000114.1 Primary Assembly 1404 na Scaffold111_1 unplaced-scaffold na na JAOXLP030000115.1 = NZ_JAOXLP030000115.1 Primary Assembly 1211 na Scaffold112_1 unplaced-scaffold na na JAOXLP030000116.1 = NZ_JAOXLP030000116.1 Primary Assembly 1192 na Scaffold113_1 unplaced-scaffold na na JAOXLP030000117.1 = NZ_JAOXLP030000117.1 Primary Assembly 1179 na Scaffold114_1 unplaced-scaffold na na JAOXLP030000118.1 = NZ_JAOXLP030000118.1 Primary Assembly 1161 na Scaffold115_1 unplaced-scaffold na na JAOXLP030000119.1 = NZ_JAOXLP030000119.1 Primary Assembly 1139 na Scaffold116_1 unplaced-scaffold na na JAOXLP030000120.1 = NZ_JAOXLP030000120.1 Primary Assembly 987 na Scaffold117_1 unplaced-scaffold na na JAOXLP030000121.1 = NZ_JAOXLP030000121.1 Primary Assembly 952 na Scaffold118_1 unplaced-scaffold na na JAOXLP030000122.1 = NZ_JAOXLP030000122.1 Primary Assembly 920 na Scaffold119_1 unplaced-scaffold na na JAOXLP030000123.1 = NZ_JAOXLP030000123.1 Primary Assembly 905 na Scaffold120_1 unplaced-scaffold na na JAOXLP030000124.1 = NZ_JAOXLP030000124.1 Primary Assembly 898 na Scaffold121_1 unplaced-scaffold na na JAOXLP030000125.1 = NZ_JAOXLP030000125.1 Primary Assembly 892 na Scaffold122_1 unplaced-scaffold na na JAOXLP030000126.1 = NZ_JAOXLP030000126.1 Primary Assembly 803 na Scaffold123_1 unplaced-scaffold na na JAOXLP030000127.1 = NZ_JAOXLP030000127.1 Primary Assembly 800 na Scaffold124_1 unplaced-scaffold na na JAOXLP030000128.1 = NZ_JAOXLP030000128.1 Primary Assembly 790 na Scaffold125_1 unplaced-scaffold na na JAOXLP030000129.1 = NZ_JAOXLP030000129.1 Primary Assembly 213 na Scaffold125_2 unplaced-scaffold na na JAOXLP030000130.1 = NZ_JAOXLP030000130.1 Primary Assembly 539 na Scaffold126_1 unplaced-scaffold na na JAOXLP030000131.1 = NZ_JAOXLP030000131.1 Primary Assembly 749 na Scaffold127_1 unplaced-scaffold na na JAOXLP030000132.1 = NZ_JAOXLP030000132.1 Primary Assembly 704 na Scaffold128_1 unplaced-scaffold na na JAOXLP030000133.1 = NZ_JAOXLP030000133.1 Primary Assembly 692 na Scaffold129_1 unplaced-scaffold na na JAOXLP030000134.1 = NZ_JAOXLP030000134.1 Primary Assembly 659 na Scaffold130_1 unplaced-scaffold na na JAOXLP030000135.1 = NZ_JAOXLP030000135.1 Primary Assembly 638 na Scaffold131_1 unplaced-scaffold na na JAOXLP030000136.1 = NZ_JAOXLP030000136.1 Primary Assembly 587 na Scaffold132_1 unplaced-scaffold na na JAOXLP030000137.1 = NZ_JAOXLP030000137.1 Primary Assembly 578 na