# Assembly name: ASM2582206v1 # Organism name: Mycobacterium intermedium (high G+C Gram-positive bacteria) # Infraspecific name: strain=DSM 44049 # Taxid: 28445 # BioSample: SAMN15568978 # BioProject: PRJNA646947 # Submitter: Uppsala University # Date: 2022-10-24 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JACKTC01 # Assembly method: A5-miseq v. 20140604 # Expected final version: yes # Genome coverage: 318x # Sequencing technology: Illumina # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_025822065.1 # RefSeq assembly accession: GCF_025822065.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_025822075.1 GCF_025822075.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name MINM-DSM44049DSM44049_contig000001 unplaced-scaffold na na JACKTC010000001.1 = NZ_JACKTC010000001.1 Primary Assembly 1206 na MINM-DSM44049DSM44049_contig000002 unplaced-scaffold na na JACKTC010000002.1 = NZ_JACKTC010000002.1 Primary Assembly 60422 na MINM-DSM44049DSM44049_contig000003 unplaced-scaffold na na JACKTC010000003.1 = NZ_JACKTC010000003.1 Primary Assembly 72198 na MINM-DSM44049DSM44049_contig000004 unplaced-scaffold na na JACKTC010000004.1 = NZ_JACKTC010000004.1 Primary Assembly 1061 na MINM-DSM44049DSM44049_contig000005 unplaced-scaffold na na JACKTC010000005.1 = NZ_JACKTC010000005.1 Primary Assembly 85082 na MINM-DSM44049DSM44049_contig000006 unplaced-scaffold na na JACKTC010000006.1 = NZ_JACKTC010000006.1 Primary Assembly 64107 na MINM-DSM44049DSM44049_contig000007 unplaced-scaffold na na JACKTC010000007.1 = NZ_JACKTC010000007.1 Primary Assembly 217243 na MINM-DSM44049DSM44049_contig000008 unplaced-scaffold na na JACKTC010000008.1 = NZ_JACKTC010000008.1 Primary Assembly 32884 na MINM-DSM44049DSM44049_contig000009 unplaced-scaffold na na JACKTC010000009.1 = NZ_JACKTC010000009.1 Primary Assembly 72675 na MINM-DSM44049DSM44049_contig000010 unplaced-scaffold na na JACKTC010000010.1 = NZ_JACKTC010000010.1 Primary Assembly 73021 na MINM-DSM44049DSM44049_contig000011 unplaced-scaffold na na JACKTC010000011.1 = NZ_JACKTC010000011.1 Primary Assembly 755 na MINM-DSM44049DSM44049_contig000012 unplaced-scaffold na na JACKTC010000012.1 = NZ_JACKTC010000012.1 Primary Assembly 277957 na MINM-DSM44049DSM44049_contig000013 unplaced-scaffold na na JACKTC010000013.1 = NZ_JACKTC010000013.1 Primary Assembly 142864 na MINM-DSM44049DSM44049_contig000014 unplaced-scaffold na na JACKTC010000014.1 = NZ_JACKTC010000014.1 Primary Assembly 84475 na MINM-DSM44049DSM44049_contig000015 unplaced-scaffold na na JACKTC010000015.1 = NZ_JACKTC010000015.1 Primary Assembly 22275 na MINM-DSM44049DSM44049_contig000016 unplaced-scaffold na na JACKTC010000016.1 = NZ_JACKTC010000016.1 Primary Assembly 2130 na MINM-DSM44049DSM44049_contig000017 unplaced-scaffold na na JACKTC010000017.1 = NZ_JACKTC010000017.1 Primary Assembly 160121 na MINM-DSM44049DSM44049_contig000018 unplaced-scaffold na na JACKTC010000018.1 = NZ_JACKTC010000018.1 Primary Assembly 302813 na MINM-DSM44049DSM44049_contig000019 unplaced-scaffold na na JACKTC010000019.1 = NZ_JACKTC010000019.1 Primary Assembly 616 na MINM-DSM44049DSM44049_contig000020 unplaced-scaffold na na JACKTC010000020.1 = NZ_JACKTC010000020.1 Primary Assembly 2324 na MINM-DSM44049DSM44049_contig000021 unplaced-scaffold na na JACKTC010000021.1 = NZ_JACKTC010000021.1 Primary Assembly 155619 na MINM-DSM44049DSM44049_contig000022 unplaced-scaffold na na JACKTC010000022.1 = NZ_JACKTC010000022.1 Primary Assembly 175053 na MINM-DSM44049DSM44049_contig000023 unplaced-scaffold na na JACKTC010000023.1 = NZ_JACKTC010000023.1 Primary Assembly 250 na MINM-DSM44049DSM44049_contig000024 unplaced-scaffold na na JACKTC010000024.1 = NZ_JACKTC010000024.1 Primary Assembly 102878 na MINM-DSM44049DSM44049_contig000025 unplaced-scaffold na na JACKTC010000025.1 = NZ_JACKTC010000025.1 Primary Assembly 177987 na MINM-DSM44049DSM44049_contig000026 unplaced-scaffold na na JACKTC010000026.1 = NZ_JACKTC010000026.1 Primary Assembly 15662 na MINM-DSM44049DSM44049_contig000027 unplaced-scaffold na na JACKTC010000027.1 = NZ_JACKTC010000027.1 Primary Assembly 1221 na MINM-DSM44049DSM44049_contig000028 unplaced-scaffold na na JACKTC010000028.1 = NZ_JACKTC010000028.1 Primary Assembly 63573 na MINM-DSM44049DSM44049_contig000029 unplaced-scaffold na na JACKTC010000029.1 = NZ_JACKTC010000029.1 Primary Assembly 1131 na MINM-DSM44049DSM44049_contig000030 unplaced-scaffold na na JACKTC010000030.1 = NZ_JACKTC010000030.1 Primary Assembly 15224 na MINM-DSM44049DSM44049_contig000031 unplaced-scaffold na na JACKTC010000031.1 = NZ_JACKTC010000031.1 Primary Assembly 67309 na MINM-DSM44049DSM44049_contig000032 unplaced-scaffold na na JACKTC010000032.1 = NZ_JACKTC010000032.1 Primary Assembly 293 na MINM-DSM44049DSM44049_contig000033 unplaced-scaffold na na JACKTC010000033.1 = NZ_JACKTC010000033.1 Primary Assembly 195521 na MINM-DSM44049DSM44049_contig000034 unplaced-scaffold na na JACKTC010000034.1 = NZ_JACKTC010000034.1 Primary Assembly 2834 na MINM-DSM44049DSM44049_contig000035 unplaced-scaffold na na JACKTC010000035.1 = NZ_JACKTC010000035.1 Primary Assembly 189058 na MINM-DSM44049DSM44049_contig000036 unplaced-scaffold na na JACKTC010000036.1 = NZ_JACKTC010000036.1 Primary Assembly 437 na MINM-DSM44049DSM44049_contig000037 unplaced-scaffold na na JACKTC010000037.1 = NZ_JACKTC010000037.1 Primary Assembly 269464 na MINM-DSM44049DSM44049_contig000038 unplaced-scaffold na na JACKTC010000038.1 = NZ_JACKTC010000038.1 Primary Assembly 517 na MINM-DSM44049DSM44049_contig000039 unplaced-scaffold na na JACKTC010000039.1 = NZ_JACKTC010000039.1 Primary Assembly 6816 na MINM-DSM44049DSM44049_contig000040 unplaced-scaffold na na JACKTC010000040.1 = NZ_JACKTC010000040.1 Primary Assembly 12889 na MINM-DSM44049DSM44049_contig000041 unplaced-scaffold na na JACKTC010000041.1 = NZ_JACKTC010000041.1 Primary Assembly 165507 na MINM-DSM44049DSM44049_contig000042 unplaced-scaffold na na JACKTC010000042.1 = NZ_JACKTC010000042.1 Primary Assembly 3211 na MINM-DSM44049DSM44049_contig000043 unplaced-scaffold na na JACKTC010000043.1 = NZ_JACKTC010000043.1 Primary Assembly 148917 na MINM-DSM44049DSM44049_contig000044 unplaced-scaffold na na JACKTC010000044.1 = NZ_JACKTC010000044.1 Primary Assembly 3807 na MINM-DSM44049DSM44049_contig000045 unplaced-scaffold na na JACKTC010000045.1 = NZ_JACKTC010000045.1 Primary Assembly 10583 na MINM-DSM44049DSM44049_contig000046 unplaced-scaffold na na JACKTC010000046.1 = NZ_JACKTC010000046.1 Primary Assembly 2083 na MINM-DSM44049DSM44049_contig000047 unplaced-scaffold na na JACKTC010000047.1 = NZ_JACKTC010000047.1 Primary Assembly 184277 na MINM-DSM44049DSM44049_contig000048 unplaced-scaffold na na JACKTC010000048.1 = NZ_JACKTC010000048.1 Primary Assembly 998 na MINM-DSM44049DSM44049_contig000049 unplaced-scaffold na na JACKTC010000049.1 = NZ_JACKTC010000049.1 Primary Assembly 35501 na MINM-DSM44049DSM44049_contig000050 unplaced-scaffold na na JACKTC010000050.1 = NZ_JACKTC010000050.1 Primary Assembly 18282 na MINM-DSM44049DSM44049_contig000051 unplaced-scaffold na na JACKTC010000051.1 = NZ_JACKTC010000051.1 Primary Assembly 262 na MINM-DSM44049DSM44049_contig000052 unplaced-scaffold na na JACKTC010000052.1 = NZ_JACKTC010000052.1 Primary Assembly 47381 na MINM-DSM44049DSM44049_contig000053 unplaced-scaffold na na JACKTC010000053.1 = NZ_JACKTC010000053.1 Primary Assembly 15462 na MINM-DSM44049DSM44049_contig000054 unplaced-scaffold na na JACKTC010000054.1 = NZ_JACKTC010000054.1 Primary Assembly 4349 na MINM-DSM44049DSM44049_contig000055 unplaced-scaffold na na JACKTC010000055.1 = NZ_JACKTC010000055.1 Primary Assembly 957 na MINM-DSM44049DSM44049_contig000056 unplaced-scaffold na na JACKTC010000056.1 = NZ_JACKTC010000056.1 Primary Assembly 4648 na MINM-DSM44049DSM44049_contig000057 unplaced-scaffold na na JACKTC010000057.1 = NZ_JACKTC010000057.1 Primary Assembly 3684 na MINM-DSM44049DSM44049_contig000058 unplaced-scaffold na na JACKTC010000058.1 = NZ_JACKTC010000058.1 Primary Assembly 48495 na MINM-DSM44049DSM44049_contig000059 unplaced-scaffold na na JACKTC010000059.1 = NZ_JACKTC010000059.1 Primary Assembly 13207 na MINM-DSM44049DSM44049_contig000060 unplaced-scaffold na na JACKTC010000060.1 = NZ_JACKTC010000060.1 Primary Assembly 28337 na MINM-DSM44049DSM44049_contig000061 unplaced-scaffold na na JACKTC010000061.1 = NZ_JACKTC010000061.1 Primary Assembly 193898 na MINM-DSM44049DSM44049_contig000062 unplaced-scaffold na na JACKTC010000062.1 = NZ_JACKTC010000062.1 Primary Assembly 418452 na MINM-DSM44049DSM44049_contig000063 unplaced-scaffold na na JACKTC010000063.1 = NZ_JACKTC010000063.1 Primary Assembly 300 na MINM-DSM44049DSM44049_contig000064 unplaced-scaffold na na JACKTC010000064.1 = NZ_JACKTC010000064.1 Primary Assembly 24029 na MINM-DSM44049DSM44049_contig000065 unplaced-scaffold na na JACKTC010000065.1 = NZ_JACKTC010000065.1 Primary Assembly 6157 na MINM-DSM44049DSM44049_contig000066 unplaced-scaffold na na JACKTC010000066.1 = NZ_JACKTC010000066.1 Primary Assembly 886 na MINM-DSM44049DSM44049_contig000067 unplaced-scaffold na na JACKTC010000067.1 = NZ_JACKTC010000067.1 Primary Assembly 2827 na MINM-DSM44049DSM44049_contig000068 unplaced-scaffold na na JACKTC010000068.1 = NZ_JACKTC010000068.1 Primary Assembly 2820 na MINM-DSM44049DSM44049_contig000069 unplaced-scaffold na na JACKTC010000069.1 = NZ_JACKTC010000069.1 Primary Assembly 7693 na MINM-DSM44049DSM44049_contig000070 unplaced-scaffold na na JACKTC010000070.1 = NZ_JACKTC010000070.1 Primary Assembly 51713 na MINM-DSM44049DSM44049_contig000071 unplaced-scaffold na na JACKTC010000071.1 = NZ_JACKTC010000071.1 Primary Assembly 12401 na MINM-DSM44049DSM44049_contig000072 unplaced-scaffold na na JACKTC010000072.1 = NZ_JACKTC010000072.1 Primary Assembly 852 na MINM-DSM44049DSM44049_contig000073 unplaced-scaffold na na JACKTC010000073.1 = NZ_JACKTC010000073.1 Primary Assembly 6429 na MINM-DSM44049DSM44049_contig000074 unplaced-scaffold na na JACKTC010000074.1 = NZ_JACKTC010000074.1 Primary Assembly 10478 na MINM-DSM44049DSM44049_contig000075 unplaced-scaffold na na JACKTC010000075.1 = NZ_JACKTC010000075.1 Primary Assembly 137500 na MINM-DSM44049DSM44049_contig000076 unplaced-scaffold na na JACKTC010000076.1 = NZ_JACKTC010000076.1 Primary Assembly 1582 na MINM-DSM44049DSM44049_contig000077 unplaced-scaffold na na JACKTC010000077.1 = NZ_JACKTC010000077.1 Primary Assembly 109313 na MINM-DSM44049DSM44049_contig000078 unplaced-scaffold na na JACKTC010000078.1 = NZ_JACKTC010000078.1 Primary Assembly 35479 na MINM-DSM44049DSM44049_contig000079 unplaced-scaffold na na JACKTC010000079.1 = NZ_JACKTC010000079.1 Primary Assembly 40751 na MINM-DSM44049DSM44049_contig000080 unplaced-scaffold na na JACKTC010000080.1 = NZ_JACKTC010000080.1 Primary Assembly 16989 na MINM-DSM44049DSM44049_contig000081 unplaced-scaffold na na JACKTC010000081.1 = NZ_JACKTC010000081.1 Primary Assembly 1024 na MINM-DSM44049DSM44049_contig000082 unplaced-scaffold na na JACKTC010000082.1 = NZ_JACKTC010000082.1 Primary Assembly 1053 na MINM-DSM44049DSM44049_contig000083 unplaced-scaffold na na JACKTC010000083.1 = NZ_JACKTC010000083.1 Primary Assembly 261 na MINM-DSM44049DSM44049_contig000084 unplaced-scaffold na na JACKTC010000084.1 = NZ_JACKTC010000084.1 Primary Assembly 44390 na MINM-DSM44049DSM44049_contig000085 unplaced-scaffold na na JACKTC010000085.1 = NZ_JACKTC010000085.1 Primary Assembly 775 na MINM-DSM44049DSM44049_contig000086 unplaced-scaffold na na JACKTC010000086.1 = NZ_JACKTC010000086.1 Primary Assembly 29853 na MINM-DSM44049DSM44049_contig000087 unplaced-scaffold na na JACKTC010000087.1 = NZ_JACKTC010000087.1 Primary Assembly 87220 na MINM-DSM44049DSM44049_contig000088 unplaced-scaffold na na JACKTC010000088.1 = NZ_JACKTC010000088.1 Primary Assembly 47860 na MINM-DSM44049DSM44049_contig000089 unplaced-scaffold na na JACKTC010000089.1 = NZ_JACKTC010000089.1 Primary Assembly 30187 na MINM-DSM44049DSM44049_contig000090 unplaced-scaffold na na JACKTC010000090.1 = NZ_JACKTC010000090.1 Primary Assembly 185413 na MINM-DSM44049DSM44049_contig000091 unplaced-scaffold na na JACKTC010000091.1 = NZ_JACKTC010000091.1 Primary Assembly 28719 na MINM-DSM44049DSM44049_contig000092 unplaced-scaffold na na JACKTC010000092.1 = NZ_JACKTC010000092.1 Primary Assembly 29552 na MINM-DSM44049DSM44049_contig000093 unplaced-scaffold na na JACKTC010000093.1 = NZ_JACKTC010000093.1 Primary Assembly 75541 na MINM-DSM44049DSM44049_contig000094 unplaced-scaffold na na JACKTC010000094.1 = NZ_JACKTC010000094.1 Primary Assembly 24114 na MINM-DSM44049DSM44049_contig000095 unplaced-scaffold na na JACKTC010000095.1 = NZ_JACKTC010000095.1 Primary Assembly 21162 na MINM-DSM44049DSM44049_contig000096 unplaced-scaffold na na JACKTC010000096.1 = NZ_JACKTC010000096.1 Primary Assembly 6256 na MINM-DSM44049DSM44049_contig000097 unplaced-scaffold na na JACKTC010000097.1 = NZ_JACKTC010000097.1 Primary Assembly 442735 na MINM-DSM44049DSM44049_contig000098 unplaced-scaffold na na JACKTC010000098.1 = NZ_JACKTC010000098.1 Primary Assembly 932 na MINM-DSM44049DSM44049_contig000099 unplaced-scaffold na na JACKTC010000099.1 = NZ_JACKTC010000099.1 Primary Assembly 2262 na MINM-DSM44049DSM44049_contig000100 unplaced-scaffold na na JACKTC010000100.1 = NZ_JACKTC010000100.1 Primary Assembly 849 na MINM-DSM44049DSM44049_contig000101 unplaced-scaffold na na JACKTC010000101.1 = NZ_JACKTC010000101.1 Primary Assembly 48987 na MINM-DSM44049DSM44049_contig000102 unplaced-scaffold na na JACKTC010000102.1 = NZ_JACKTC010000102.1 Primary Assembly 92686 na MINM-DSM44049DSM44049_contig000103 unplaced-scaffold na na JACKTC010000103.1 = NZ_JACKTC010000103.1 Primary Assembly 2428 na MINM-DSM44049DSM44049_contig000104 unplaced-scaffold na na JACKTC010000104.1 = NZ_JACKTC010000104.1 Primary Assembly 72570 na MINM-DSM44049DSM44049_contig000105 unplaced-scaffold na na JACKTC010000105.1 = NZ_JACKTC010000105.1 Primary Assembly 866 na MINM-DSM44049DSM44049_contig000106 unplaced-scaffold na na JACKTC010000106.1 = NZ_JACKTC010000106.1 Primary Assembly 169186 na MINM-DSM44049DSM44049_contig000107 unplaced-scaffold na na JACKTC010000107.1 = NZ_JACKTC010000107.1 Primary Assembly 104418 na MINM-DSM44049DSM44049_contig000108 unplaced-scaffold na na JACKTC010000108.1 = NZ_JACKTC010000108.1 Primary Assembly 125268 na MINM-DSM44049DSM44049_contig000109 unplaced-scaffold na na JACKTC010000109.1 = NZ_JACKTC010000109.1 Primary Assembly 115180 na MINM-DSM44049DSM44049_contig000110 unplaced-scaffold na na JACKTC010000110.1 = NZ_JACKTC010000110.1 Primary Assembly 106748 na MINM-DSM44049DSM44049_contig000111 unplaced-scaffold na na JACKTC010000111.1 = NZ_JACKTC010000111.1 Primary Assembly 36704 na