# Assembly name: ASM2706384v1 # Organism name: Thermococcus sp. (euryarchaeotes) # Isolate: 4561-380_maxbin2_scaf2bin.010 # Taxid: 35749 # BioSample: SAMN27358132 # BioProject: PRJNA821212 # Submitter: Portland State University # Date: 2022-12-19 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAMOQU01 # Assembly method: SPAdes v. 3.11.1 # Expected final version: yes # Genome coverage: 124.31x # Sequencing technology: Illumina HiSeq # Excluded from RefSeq: derived from metagenome # GenBank assembly accession: GCA_027063845.1 # RefSeq assembly accession: GCF_027063845.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_027063855.1 GCF_027063855.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 4561-380_scaffold_1005_c1 unplaced-scaffold na na JAMOQU010000001.1 = NZ_JAMOQU010000001.1 Primary Assembly 13555 na 4561-380_scaffold_1014_c1 unplaced-scaffold na na JAMOQU010000002.1 = NZ_JAMOQU010000002.1 Primary Assembly 13475 na 4561-380_scaffold_1029_c1 unplaced-scaffold na na JAMOQU010000003.1 = NZ_JAMOQU010000003.1 Primary Assembly 13363 na 4561-380_scaffold_10395_c1 unplaced-scaffold na na JAMOQU010000004.1 = NZ_JAMOQU010000004.1 Primary Assembly 2228 na 4561-380_scaffold_10621_c1 unplaced-scaffold na na JAMOQU010000005.1 = NZ_JAMOQU010000005.1 Primary Assembly 2188 na 4561-380_scaffold_10970_c1 unplaced-scaffold na na JAMOQU010000006.1 = NZ_JAMOQU010000006.1 Primary Assembly 2133 na 4561-380_scaffold_112_c1 unplaced-scaffold na na JAMOQU010000007.1 = NZ_JAMOQU010000007.1 Primary Assembly 50601 na 4561-380_scaffold_1139_c1 unplaced-scaffold na na JAMOQU010000008.1 = NZ_JAMOQU010000008.1 Primary Assembly 12451 na 4561-380_scaffold_115_c1 unplaced-scaffold na na JAMOQU010000009.1 = NZ_JAMOQU010000009.1 Primary Assembly 50122 na 4561-380_scaffold_11841_c1 unplaced-scaffold na na JAMOQU010000010.1 = NZ_JAMOQU010000010.1 Primary Assembly 2001 na 4561-380_scaffold_11904_c1 unplaced-scaffold na na JAMOQU010000011.1 = NZ_JAMOQU010000011.1 Primary Assembly 1992 na 4561-380_scaffold_11956_c1 unplaced-scaffold na na JAMOQU010000012.1 = NZ_JAMOQU010000012.1 Primary Assembly 1985 na 4561-380_scaffold_12174_c1 unplaced-scaffold na na JAMOQU010000013.1 = NZ_JAMOQU010000013.1 Primary Assembly 1959 na 4561-380_scaffold_1218_c1 unplaced-scaffold na na JAMOQU010000014.1 = NZ_JAMOQU010000014.1 Primary Assembly 11887 na 4561-380_scaffold_12509_c1 unplaced-scaffold na na JAMOQU010000015.1 = NZ_JAMOQU010000015.1 Primary Assembly 1915 na 4561-380_scaffold_13038_c1 unplaced-scaffold na na JAMOQU010000016.1 = NZ_JAMOQU010000016.1 Primary Assembly 1846 na 4561-380_scaffold_1331_c1 unplaced-scaffold na na JAMOQU010000017.1 = NZ_JAMOQU010000017.1 Primary Assembly 11005 na 4561-380_scaffold_1349_c1 unplaced-scaffold na na JAMOQU010000018.1 = NZ_JAMOQU010000018.1 Primary Assembly 10846 na 4561-380_scaffold_13_c1 unplaced-scaffold na na JAMOQU010000019.1 = NZ_JAMOQU010000019.1 Primary Assembly 161339 na 4561-380_scaffold_1413_c1 unplaced-scaffold na na JAMOQU010000020.1 = NZ_JAMOQU010000020.1 Primary Assembly 10517 na 4561-380_scaffold_14332_c1 unplaced-scaffold na na JAMOQU010000021.1 = NZ_JAMOQU010000021.1 Primary Assembly 1711 na 4561-380_scaffold_15565_c1 unplaced-scaffold na na JAMOQU010000022.1 = NZ_JAMOQU010000022.1 Primary Assembly 1598 na 4561-380_scaffold_1564_c1 unplaced-scaffold na na JAMOQU010000023.1 = NZ_JAMOQU010000023.1 Primary Assembly 9779 na 4561-380_scaffold_15922_c1 unplaced-scaffold na na JAMOQU010000024.1 = NZ_JAMOQU010000024.1 Primary Assembly 1569 na 4561-380_scaffold_1624_c1 unplaced-scaffold na na JAMOQU010000025.1 = NZ_JAMOQU010000025.1 Primary Assembly 9497 na 4561-380_scaffold_16251_c1 unplaced-scaffold na na JAMOQU010000026.1 = NZ_JAMOQU010000026.1 Primary Assembly 1542 na 4561-380_scaffold_1641_c1 unplaced-scaffold na na JAMOQU010000027.1 = NZ_JAMOQU010000027.1 Primary Assembly 9417 na 4561-380_scaffold_16613_c1 unplaced-scaffold na na JAMOQU010000028.1 = NZ_JAMOQU010000028.1 Primary Assembly 1514 na 4561-380_scaffold_166_c1 unplaced-scaffold na na JAMOQU010000029.1 = NZ_JAMOQU010000029.1 Primary Assembly 41684 na 4561-380_scaffold_16760_c1 unplaced-scaffold na na JAMOQU010000030.1 = NZ_JAMOQU010000030.1 Primary Assembly 1501 na 4561-380_scaffold_1688_c1 unplaced-scaffold na na JAMOQU010000031.1 = NZ_JAMOQU010000031.1 Primary Assembly 9194 na 4561-380_scaffold_1719_c1 unplaced-scaffold na na JAMOQU010000032.1 = NZ_JAMOQU010000032.1 Primary Assembly 9077 na 4561-380_scaffold_172_c1 unplaced-scaffold na na JAMOQU010000033.1 = NZ_JAMOQU010000033.1 Primary Assembly 41276 na 4561-380_scaffold_17332_c1 unplaced-scaffold na na JAMOQU010000034.1 = NZ_JAMOQU010000034.1 Primary Assembly 1461 na 4561-380_scaffold_1733_c1 unplaced-scaffold na na JAMOQU010000035.1 = NZ_JAMOQU010000035.1 Primary Assembly 4126 na 4561-380_scaffold_1733_c2 unplaced-scaffold na na JAMOQU010000036.1 = NZ_JAMOQU010000036.1 Primary Assembly 4807 na 4561-380_scaffold_17410_c1 unplaced-scaffold na na JAMOQU010000037.1 = NZ_JAMOQU010000037.1 Primary Assembly 1455 na 4561-380_scaffold_17683_c1 unplaced-scaffold na na JAMOQU010000038.1 = NZ_JAMOQU010000038.1 Primary Assembly 1436 na 4561-380_scaffold_17684_c1 unplaced-scaffold na na JAMOQU010000039.1 = NZ_JAMOQU010000039.1 Primary Assembly 1436 na 4561-380_scaffold_17948_c1 unplaced-scaffold na na JAMOQU010000040.1 = NZ_JAMOQU010000040.1 Primary Assembly 1420 na 4561-380_scaffold_1825_c1 unplaced-scaffold na na JAMOQU010000041.1 = NZ_JAMOQU010000041.1 Primary Assembly 8659 na 4561-380_scaffold_182_c1 unplaced-scaffold na na JAMOQU010000042.1 = NZ_JAMOQU010000042.1 Primary Assembly 40201 na 4561-380_scaffold_18474_c1 unplaced-scaffold na na JAMOQU010000043.1 = NZ_JAMOQU010000043.1 Primary Assembly 1385 na 4561-380_scaffold_18594_c1 unplaced-scaffold na na JAMOQU010000044.1 = NZ_JAMOQU010000044.1 Primary Assembly 1377 na 4561-380_scaffold_19262_c1 unplaced-scaffold na na JAMOQU010000045.1 = NZ_JAMOQU010000045.1 Primary Assembly 1338 na 4561-380_scaffold_20349_c1 unplaced-scaffold na na JAMOQU010000046.1 = NZ_JAMOQU010000046.1 Primary Assembly 1279 na 4561-380_scaffold_21450_c1 unplaced-scaffold na na JAMOQU010000047.1 = NZ_JAMOQU010000047.1 Primary Assembly 1223 na 4561-380_scaffold_214_c1 unplaced-scaffold na na JAMOQU010000048.1 = NZ_JAMOQU010000048.1 Primary Assembly 37422 na 4561-380_scaffold_21622_c1 unplaced-scaffold na na JAMOQU010000049.1 = NZ_JAMOQU010000049.1 Primary Assembly 1214 na 4561-380_scaffold_2203_c1 unplaced-scaffold na na JAMOQU010000050.1 = NZ_JAMOQU010000050.1 Primary Assembly 7537 na 4561-380_scaffold_22456_c1 unplaced-scaffold na na JAMOQU010000051.1 = NZ_JAMOQU010000051.1 Primary Assembly 1177 na 4561-380_scaffold_225_c1 unplaced-scaffold na na JAMOQU010000052.1 = NZ_JAMOQU010000052.1 Primary Assembly 36200 na 4561-380_scaffold_2271_c1 unplaced-scaffold na na JAMOQU010000053.1 = NZ_JAMOQU010000053.1 Primary Assembly 7317 na 4561-380_scaffold_2292_c2 unplaced-scaffold na na JAMOQU010000054.1 = NZ_JAMOQU010000054.1 Primary Assembly 2314 na 4561-380_scaffold_2311_c1 unplaced-scaffold na na JAMOQU010000055.1 = NZ_JAMOQU010000055.1 Primary Assembly 1567 na 4561-380_scaffold_2311_c2 unplaced-scaffold na na JAMOQU010000056.1 = NZ_JAMOQU010000056.1 Primary Assembly 5533 na 4561-380_scaffold_24230_c1 unplaced-scaffold na na JAMOQU010000057.1 = NZ_JAMOQU010000057.1 Primary Assembly 1102 na 4561-380_scaffold_24232_c1 unplaced-scaffold na na JAMOQU010000058.1 = NZ_JAMOQU010000058.1 Primary Assembly 1102 na 4561-380_scaffold_24392_c1 unplaced-scaffold na na JAMOQU010000059.1 = NZ_JAMOQU010000059.1 Primary Assembly 1096 na 4561-380_scaffold_2537_c1 unplaced-scaffold na na JAMOQU010000060.1 = NZ_JAMOQU010000060.1 Primary Assembly 6702 na 4561-380_scaffold_25403_c1 unplaced-scaffold na na JAMOQU010000061.1 = NZ_JAMOQU010000061.1 Primary Assembly 1057 na 4561-380_scaffold_2564_c1 unplaced-scaffold na na JAMOQU010000062.1 = NZ_JAMOQU010000062.1 Primary Assembly 6659 na 4561-380_scaffold_25855_c1 unplaced-scaffold na na JAMOQU010000063.1 = NZ_JAMOQU010000063.1 Primary Assembly 1041 na 4561-380_scaffold_2653_c1 unplaced-scaffold na na JAMOQU010000064.1 = NZ_JAMOQU010000064.1 Primary Assembly 6490 na 4561-380_scaffold_266_c1 unplaced-scaffold na na JAMOQU010000065.1 = NZ_JAMOQU010000065.1 Primary Assembly 32115 na 4561-380_scaffold_267_c1 unplaced-scaffold na na JAMOQU010000066.1 = NZ_JAMOQU010000066.1 Primary Assembly 32113 na 4561-380_scaffold_2704_c1 unplaced-scaffold na na JAMOQU010000067.1 = NZ_JAMOQU010000067.1 Primary Assembly 6386 na 4561-380_scaffold_270_c1 unplaced-scaffold na na JAMOQU010000068.1 = NZ_JAMOQU010000068.1 Primary Assembly 18844 na 4561-380_scaffold_270_c2 unplaced-scaffold na na JAMOQU010000069.1 = NZ_JAMOQU010000069.1 Primary Assembly 12981 na 4561-380_scaffold_2760_c1 unplaced-scaffold na na JAMOQU010000070.1 = NZ_JAMOQU010000070.1 Primary Assembly 6279 na 4561-380_scaffold_2770_c1 unplaced-scaffold na na JAMOQU010000071.1 = NZ_JAMOQU010000071.1 Primary Assembly 6268 na 4561-380_scaffold_27_c2 unplaced-scaffold na na JAMOQU010000072.1 = NZ_JAMOQU010000072.1 Primary Assembly 121070 na 4561-380_scaffold_283_c1 unplaced-scaffold na na JAMOQU010000073.1 = NZ_JAMOQU010000073.1 Primary Assembly 30831 na 4561-380_scaffold_2920_c1 unplaced-scaffold na na JAMOQU010000074.1 = NZ_JAMOQU010000074.1 Primary Assembly 6019 na 4561-380_scaffold_3201_c1 unplaced-scaffold na na JAMOQU010000075.1 = NZ_JAMOQU010000075.1 Primary Assembly 5632 na 4561-380_scaffold_3311_c1 unplaced-scaffold na na JAMOQU010000076.1 = NZ_JAMOQU010000076.1 Primary Assembly 5480 na 4561-380_scaffold_3613_c1 unplaced-scaffold na na JAMOQU010000077.1 = NZ_JAMOQU010000077.1 Primary Assembly 5153 na 4561-380_scaffold_3666_c1 unplaced-scaffold na na JAMOQU010000078.1 = NZ_JAMOQU010000078.1 Primary Assembly 5094 na 4561-380_scaffold_3674_c1 unplaced-scaffold na na JAMOQU010000079.1 = NZ_JAMOQU010000079.1 Primary Assembly 5089 na 4561-380_scaffold_3785_c1 unplaced-scaffold na na JAMOQU010000080.1 = NZ_JAMOQU010000080.1 Primary Assembly 4965 na 4561-380_scaffold_382_c1 unplaced-scaffold na na JAMOQU010000081.1 = NZ_JAMOQU010000081.1 Primary Assembly 25460 na 4561-380_scaffold_4123_c1 unplaced-scaffold na na JAMOQU010000082.1 = NZ_JAMOQU010000082.1 Primary Assembly 4656 na 4561-380_scaffold_417_c1 unplaced-scaffold na na JAMOQU010000083.1 = NZ_JAMOQU010000083.1 Primary Assembly 24184 na 4561-380_scaffold_431_c1 unplaced-scaffold na na JAMOQU010000084.1 = NZ_JAMOQU010000084.1 Primary Assembly 23611 na 4561-380_scaffold_4659_c1 unplaced-scaffold na na JAMOQU010000085.1 = NZ_JAMOQU010000085.1 Primary Assembly 4242 na 4561-380_scaffold_4671_c1 unplaced-scaffold na na JAMOQU010000086.1 = NZ_JAMOQU010000086.1 Primary Assembly 4233 na 4561-380_scaffold_4771_c1 unplaced-scaffold na na JAMOQU010000087.1 = NZ_JAMOQU010000087.1 Primary Assembly 4163 na 4561-380_scaffold_4772_c1 unplaced-scaffold na na JAMOQU010000088.1 = NZ_JAMOQU010000088.1 Primary Assembly 4163 na 4561-380_scaffold_50_c1 unplaced-scaffold na na JAMOQU010000089.1 = NZ_JAMOQU010000089.1 Primary Assembly 78174 na 4561-380_scaffold_5200_c1 unplaced-scaffold na na JAMOQU010000090.1 = NZ_JAMOQU010000090.1 Primary Assembly 3921 na 4561-380_scaffold_5232_c1 unplaced-scaffold na na JAMOQU010000091.1 = NZ_JAMOQU010000091.1 Primary Assembly 3906 na 4561-380_scaffold_533_c1 unplaced-scaffold na na JAMOQU010000092.1 = NZ_JAMOQU010000092.1 Primary Assembly 20476 na 4561-380_scaffold_5400_c1 unplaced-scaffold na na JAMOQU010000093.1 = NZ_JAMOQU010000093.1 Primary Assembly 3797 na 4561-380_scaffold_540_c1 unplaced-scaffold na na JAMOQU010000094.1 = NZ_JAMOQU010000094.1 Primary Assembly 20336 na 4561-380_scaffold_5545_c1 unplaced-scaffold na na JAMOQU010000095.1 = NZ_JAMOQU010000095.1 Primary Assembly 3716 na 4561-380_scaffold_5615_c1 unplaced-scaffold na na JAMOQU010000096.1 = NZ_JAMOQU010000096.1 Primary Assembly 3678 na 4561-380_scaffold_5617_c1 unplaced-scaffold na na JAMOQU010000097.1 = NZ_JAMOQU010000097.1 Primary Assembly 3677 na 4561-380_scaffold_60_c1 unplaced-scaffold na na JAMOQU010000098.1 = NZ_JAMOQU010000098.1 Primary Assembly 71373 na 4561-380_scaffold_6187_c1 unplaced-scaffold na na JAMOQU010000099.1 = NZ_JAMOQU010000099.1 Primary Assembly 3400 na 4561-380_scaffold_6324_c1 unplaced-scaffold na na JAMOQU010000100.1 = NZ_JAMOQU010000100.1 Primary Assembly 3334 na 4561-380_scaffold_63_c1 unplaced-scaffold na na JAMOQU010000101.1 = NZ_JAMOQU010000101.1 Primary Assembly 67976 na 4561-380_scaffold_6468_c1 unplaced-scaffold na na JAMOQU010000102.1 = NZ_JAMOQU010000102.1 Primary Assembly 3277 na 4561-380_scaffold_65_c1 unplaced-scaffold na na JAMOQU010000103.1 = NZ_JAMOQU010000103.1 Primary Assembly 65281 na 4561-380_scaffold_662_c1 unplaced-scaffold na na JAMOQU010000104.1 = NZ_JAMOQU010000104.1 Primary Assembly 17856 na 4561-380_scaffold_6657_c1 unplaced-scaffold na na JAMOQU010000105.1 = NZ_JAMOQU010000105.1 Primary Assembly 3198 na 4561-380_scaffold_690_c1 unplaced-scaffold na na JAMOQU010000106.1 = NZ_JAMOQU010000106.1 Primary Assembly 17595 na 4561-380_scaffold_7258_c1 unplaced-scaffold na na JAMOQU010000107.1 = NZ_JAMOQU010000107.1 Primary Assembly 2979 na 4561-380_scaffold_7292_c1 unplaced-scaffold na na JAMOQU010000108.1 = NZ_JAMOQU010000108.1 Primary Assembly 2971 na 4561-380_scaffold_72_c1 unplaced-scaffold na na JAMOQU010000109.1 = NZ_JAMOQU010000109.1 Primary Assembly 62094 na 4561-380_scaffold_758_c1 unplaced-scaffold na na JAMOQU010000110.1 = NZ_JAMOQU010000110.1 Primary Assembly 16501 na 4561-380_scaffold_7613_c1 unplaced-scaffold na na JAMOQU010000111.1 = NZ_JAMOQU010000111.1 Primary Assembly 2868 na 4561-380_scaffold_761_c1 unplaced-scaffold na na JAMOQU010000112.1 = NZ_JAMOQU010000112.1 Primary Assembly 16449 na 4561-380_scaffold_7631_c1 unplaced-scaffold na na JAMOQU010000113.1 = NZ_JAMOQU010000113.1 Primary Assembly 2860 na 4561-380_scaffold_7702_c1 unplaced-scaffold na na JAMOQU010000114.1 = NZ_JAMOQU010000114.1 Primary Assembly 2836 na 4561-380_scaffold_77_c1 unplaced-scaffold na na JAMOQU010000115.1 = NZ_JAMOQU010000115.1 Primary Assembly 60358 na 4561-380_scaffold_7801_c1 unplaced-scaffold na na JAMOQU010000116.1 = NZ_JAMOQU010000116.1 Primary Assembly 2806 na 4561-380_scaffold_7827_c1 unplaced-scaffold na na JAMOQU010000117.1 = NZ_JAMOQU010000117.1 Primary Assembly 2798 na 4561-380_scaffold_7902_c1 unplaced-scaffold na na JAMOQU010000118.1 = NZ_JAMOQU010000118.1 Primary Assembly 2778 na 4561-380_scaffold_798_c1 unplaced-scaffold na na JAMOQU010000119.1 = NZ_JAMOQU010000119.1 Primary Assembly 15949 na 4561-380_scaffold_8014_c1 unplaced-scaffold na na JAMOQU010000120.1 = NZ_JAMOQU010000120.1 Primary Assembly 2747 na 4561-380_scaffold_820_c1 unplaced-scaffold na na JAMOQU010000121.1 = NZ_JAMOQU010000121.1 Primary Assembly 15707 na 4561-380_scaffold_8282_c1 unplaced-scaffold na na JAMOQU010000122.1 = NZ_JAMOQU010000122.1 Primary Assembly 2673 na 4561-380_scaffold_864_c1 unplaced-scaffold na na JAMOQU010000123.1 = NZ_JAMOQU010000123.1 Primary Assembly 15131 na 4561-380_scaffold_896_c1 unplaced-scaffold na na JAMOQU010000124.1 = NZ_JAMOQU010000124.1 Primary Assembly 7580 na 4561-380_scaffold_896_c2 unplaced-scaffold na na JAMOQU010000125.1 = NZ_JAMOQU010000125.1 Primary Assembly 7142 na 4561-380_scaffold_9011_c1 unplaced-scaffold na na JAMOQU010000126.1 = NZ_JAMOQU010000126.1 Primary Assembly 2495 na 4561-380_scaffold_91_c1 unplaced-scaffold na na JAMOQU010000127.1 = NZ_JAMOQU010000127.1 Primary Assembly 55532 na 4561-380_scaffold_923_c1 unplaced-scaffold na na JAMOQU010000128.1 = NZ_JAMOQU010000128.1 Primary Assembly 14494 na 4561-380_scaffold_92_c1 unplaced-scaffold na na JAMOQU010000129.1 = NZ_JAMOQU010000129.1 Primary Assembly 55131 na 4561-380_scaffold_946_c1 unplaced-scaffold na na JAMOQU010000130.1 = NZ_JAMOQU010000130.1 Primary Assembly 14285 na 4561-380_scaffold_9673_c1 unplaced-scaffold na na JAMOQU010000131.1 = NZ_JAMOQU010000131.1 Primary Assembly 2360 na 4561-380_scaffold_971_c1 unplaced-scaffold na na JAMOQU010000132.1 = NZ_JAMOQU010000132.1 Primary Assembly 13938 na 4561-380_scaffold_9749_c1 unplaced-scaffold na na JAMOQU010000133.1 = NZ_JAMOQU010000133.1 Primary Assembly 2344 na 4561-380_scaffold_9806_c1 unplaced-scaffold na na JAMOQU010000134.1 = NZ_JAMOQU010000134.1 Primary Assembly 2334 na