# Assembly name: ASM2758717v1 # Organism name: Solirubrobacter deserti (actinobacteria) # Infraspecific name: strain=CPCC 204708 # Taxid: 2282478 # BioSample: SAMN31413591 # BioProject: PRJNA893195 # Submitter: Chinese Academy of Medical Sciences & Peking Union Medical College # Date: 2023-01-06 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAPCID01 # Assembly method: SOAPdenovo v. 1.05 # Expected final version: yes # Genome coverage: 138.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_027587175.1 # RefSeq assembly accession: GCF_027587175.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_027587185.1 GCF_027587185.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1_1 unplaced-scaffold na na JAPCID010000001.1 = NZ_JAPCID010000001.1 Primary Assembly 254063 na Scaffold2_1 unplaced-scaffold na na JAPCID010000002.1 = NZ_JAPCID010000002.1 Primary Assembly 233160 na Scaffold3_1 unplaced-scaffold na na JAPCID010000003.1 = NZ_JAPCID010000003.1 Primary Assembly 144506 na Scaffold3_2 unplaced-scaffold na na JAPCID010000004.1 = NZ_JAPCID010000004.1 Primary Assembly 77368 na Scaffold4_1 unplaced-scaffold na na JAPCID010000005.1 = NZ_JAPCID010000005.1 Primary Assembly 207492 na Scaffold5_1 unplaced-scaffold na na JAPCID010000006.1 = NZ_JAPCID010000006.1 Primary Assembly 207279 na Scaffold6_1 unplaced-scaffold na na JAPCID010000007.1 = NZ_JAPCID010000007.1 Primary Assembly 207228 na Scaffold7_1 unplaced-scaffold na na JAPCID010000008.1 = NZ_JAPCID010000008.1 Primary Assembly 194479 na Scaffold8_1 unplaced-scaffold na na JAPCID010000009.1 = NZ_JAPCID010000009.1 Primary Assembly 186278 na Scaffold9_1 unplaced-scaffold na na JAPCID010000010.1 = NZ_JAPCID010000010.1 Primary Assembly 169543 na Scaffold10_1 unplaced-scaffold na na JAPCID010000011.1 = NZ_JAPCID010000011.1 Primary Assembly 168391 na Scaffold11_1 unplaced-scaffold na na JAPCID010000012.1 = NZ_JAPCID010000012.1 Primary Assembly 157759 na Scaffold12_1 unplaced-scaffold na na JAPCID010000013.1 = NZ_JAPCID010000013.1 Primary Assembly 151960 na Scaffold13_1 unplaced-scaffold na na JAPCID010000014.1 = NZ_JAPCID010000014.1 Primary Assembly 147280 na Scaffold14_1 unplaced-scaffold na na JAPCID010000015.1 = NZ_JAPCID010000015.1 Primary Assembly 146522 na Scaffold15_1 unplaced-scaffold na na JAPCID010000016.1 = NZ_JAPCID010000016.1 Primary Assembly 141072 na Scaffold16_1 unplaced-scaffold na na JAPCID010000017.1 = NZ_JAPCID010000017.1 Primary Assembly 133002 na Scaffold17_1 unplaced-scaffold na na JAPCID010000018.1 = NZ_JAPCID010000018.1 Primary Assembly 128517 na Scaffold18_1 unplaced-scaffold na na JAPCID010000019.1 = NZ_JAPCID010000019.1 Primary Assembly 123096 na Scaffold19_1 unplaced-scaffold na na JAPCID010000020.1 = NZ_JAPCID010000020.1 Primary Assembly 120268 na Scaffold20_1 unplaced-scaffold na na JAPCID010000021.1 = NZ_JAPCID010000021.1 Primary Assembly 116506 na Scaffold21_1 unplaced-scaffold na na JAPCID010000022.1 = NZ_JAPCID010000022.1 Primary Assembly 111952 na Scaffold22_1 unplaced-scaffold na na JAPCID010000023.1 = NZ_JAPCID010000023.1 Primary Assembly 106912 na Scaffold23_1 unplaced-scaffold na na JAPCID010000024.1 = NZ_JAPCID010000024.1 Primary Assembly 40193 na Scaffold23_2 unplaced-scaffold na na JAPCID010000025.1 = NZ_JAPCID010000025.1 Primary Assembly 63575 na Scaffold24_1 unplaced-scaffold na na JAPCID010000026.1 = NZ_JAPCID010000026.1 Primary Assembly 103151 na Scaffold25_1 unplaced-scaffold na na JAPCID010000027.1 = NZ_JAPCID010000027.1 Primary Assembly 102924 na Scaffold26_1 unplaced-scaffold na na JAPCID010000028.1 = NZ_JAPCID010000028.1 Primary Assembly 101048 na Scaffold27_1 unplaced-scaffold na na JAPCID010000029.1 = NZ_JAPCID010000029.1 Primary Assembly 96346 na Scaffold28_1 unplaced-scaffold na na JAPCID010000030.1 = NZ_JAPCID010000030.1 Primary Assembly 93836 na Scaffold29_1 unplaced-scaffold na na JAPCID010000031.1 = NZ_JAPCID010000031.1 Primary Assembly 86568 na Scaffold30_1 unplaced-scaffold na na JAPCID010000032.1 = NZ_JAPCID010000032.1 Primary Assembly 85841 na Scaffold31_1 unplaced-scaffold na na JAPCID010000033.1 = NZ_JAPCID010000033.1 Primary Assembly 81920 na Scaffold32_1 unplaced-scaffold na na JAPCID010000034.1 = NZ_JAPCID010000034.1 Primary Assembly 65400 na Scaffold32_2 unplaced-scaffold na na JAPCID010000035.1 = NZ_JAPCID010000035.1 Primary Assembly 13183 na Scaffold33_1 unplaced-scaffold na na JAPCID010000036.1 = NZ_JAPCID010000036.1 Primary Assembly 77139 na Scaffold34_1 unplaced-scaffold na na JAPCID010000037.1 = NZ_JAPCID010000037.1 Primary Assembly 77127 na Scaffold35_1 unplaced-scaffold na na JAPCID010000038.1 = NZ_JAPCID010000038.1 Primary Assembly 77040 na Scaffold36_1 unplaced-scaffold na na JAPCID010000039.1 = NZ_JAPCID010000039.1 Primary Assembly 17946 na Scaffold36_2 unplaced-scaffold na na JAPCID010000040.1 = NZ_JAPCID010000040.1 Primary Assembly 57110 na Scaffold37_1 unplaced-scaffold na na JAPCID010000041.1 = NZ_JAPCID010000041.1 Primary Assembly 73810 na Scaffold38_1 unplaced-scaffold na na JAPCID010000042.1 = NZ_JAPCID010000042.1 Primary Assembly 73063 na Scaffold39_1 unplaced-scaffold na na JAPCID010000043.1 = NZ_JAPCID010000043.1 Primary Assembly 72294 na Scaffold40_1 unplaced-scaffold na na JAPCID010000044.1 = NZ_JAPCID010000044.1 Primary Assembly 68596 na Scaffold41_1 unplaced-scaffold na na JAPCID010000045.1 = NZ_JAPCID010000045.1 Primary Assembly 67638 na Scaffold42_1 unplaced-scaffold na na JAPCID010000046.1 = NZ_JAPCID010000046.1 Primary Assembly 66270 na Scaffold43_1 unplaced-scaffold na na JAPCID010000047.1 = NZ_JAPCID010000047.1 Primary Assembly 64312 na Scaffold44_1 unplaced-scaffold na na JAPCID010000048.1 = NZ_JAPCID010000048.1 Primary Assembly 62954 na Scaffold45_1 unplaced-scaffold na na JAPCID010000049.1 = NZ_JAPCID010000049.1 Primary Assembly 61588 na Scaffold46_1 unplaced-scaffold na na JAPCID010000050.1 = NZ_JAPCID010000050.1 Primary Assembly 59534 na Scaffold47_1 unplaced-scaffold na na JAPCID010000051.1 = NZ_JAPCID010000051.1 Primary Assembly 57985 na Scaffold48_1 unplaced-scaffold na na JAPCID010000052.1 = NZ_JAPCID010000052.1 Primary Assembly 57219 na Scaffold49_1 unplaced-scaffold na na JAPCID010000053.1 = NZ_JAPCID010000053.1 Primary Assembly 51422 na Scaffold50_1 unplaced-scaffold na na JAPCID010000054.1 = NZ_JAPCID010000054.1 Primary Assembly 45552 na Scaffold51_1 unplaced-scaffold na na JAPCID010000055.1 = NZ_JAPCID010000055.1 Primary Assembly 45545 na Scaffold52_1 unplaced-scaffold na na JAPCID010000056.1 = NZ_JAPCID010000056.1 Primary Assembly 45450 na Scaffold53_1 unplaced-scaffold na na JAPCID010000057.1 = NZ_JAPCID010000057.1 Primary Assembly 45206 na Scaffold54_1 unplaced-scaffold na na JAPCID010000058.1 = NZ_JAPCID010000058.1 Primary Assembly 44474 na Scaffold55_1 unplaced-scaffold na na JAPCID010000059.1 = NZ_JAPCID010000059.1 Primary Assembly 44341 na Scaffold56_1 unplaced-scaffold na na JAPCID010000060.1 = NZ_JAPCID010000060.1 Primary Assembly 43437 na Scaffold57_1 unplaced-scaffold na na JAPCID010000061.1 = NZ_JAPCID010000061.1 Primary Assembly 43404 na Scaffold58_1 unplaced-scaffold na na JAPCID010000062.1 = NZ_JAPCID010000062.1 Primary Assembly 42638 na Scaffold59_1 unplaced-scaffold na na JAPCID010000063.1 = NZ_JAPCID010000063.1 Primary Assembly 40980 na Scaffold60_1 unplaced-scaffold na na JAPCID010000064.1 = NZ_JAPCID010000064.1 Primary Assembly 40739 na Scaffold61_1 unplaced-scaffold na na JAPCID010000065.1 = NZ_JAPCID010000065.1 Primary Assembly 40423 na Scaffold62_1 unplaced-scaffold na na JAPCID010000066.1 = NZ_JAPCID010000066.1 Primary Assembly 40073 na Scaffold63_1 unplaced-scaffold na na JAPCID010000067.1 = NZ_JAPCID010000067.1 Primary Assembly 38530 na Scaffold64_1 unplaced-scaffold na na JAPCID010000068.1 = NZ_JAPCID010000068.1 Primary Assembly 37823 na Scaffold65_1 unplaced-scaffold na na JAPCID010000069.1 = NZ_JAPCID010000069.1 Primary Assembly 37602 na Scaffold66_1 unplaced-scaffold na na JAPCID010000070.1 = NZ_JAPCID010000070.1 Primary Assembly 36971 na Scaffold67_1 unplaced-scaffold na na JAPCID010000071.1 = NZ_JAPCID010000071.1 Primary Assembly 35598 na Scaffold68_1 unplaced-scaffold na na JAPCID010000072.1 = NZ_JAPCID010000072.1 Primary Assembly 34534 na Scaffold69_1 unplaced-scaffold na na JAPCID010000073.1 = NZ_JAPCID010000073.1 Primary Assembly 33276 na Scaffold70_1 unplaced-scaffold na na JAPCID010000074.1 = NZ_JAPCID010000074.1 Primary Assembly 32803 na Scaffold71_1 unplaced-scaffold na na JAPCID010000075.1 = NZ_JAPCID010000075.1 Primary Assembly 31473 na Scaffold72_1 unplaced-scaffold na na JAPCID010000076.1 = NZ_JAPCID010000076.1 Primary Assembly 30785 na Scaffold73_1 unplaced-scaffold na na JAPCID010000077.1 = NZ_JAPCID010000077.1 Primary Assembly 29858 na Scaffold74_1 unplaced-scaffold na na JAPCID010000078.1 = NZ_JAPCID010000078.1 Primary Assembly 28553 na Scaffold75_1 unplaced-scaffold na na JAPCID010000079.1 = NZ_JAPCID010000079.1 Primary Assembly 27508 na Scaffold76_1 unplaced-scaffold na na JAPCID010000080.1 = NZ_JAPCID010000080.1 Primary Assembly 26454 na Scaffold77_1 unplaced-scaffold na na JAPCID010000081.1 = NZ_JAPCID010000081.1 Primary Assembly 26238 na Scaffold78_1 unplaced-scaffold na na JAPCID010000082.1 = NZ_JAPCID010000082.1 Primary Assembly 24068 na Scaffold79_1 unplaced-scaffold na na JAPCID010000083.1 = NZ_JAPCID010000083.1 Primary Assembly 23387 na Scaffold80_1 unplaced-scaffold na na JAPCID010000084.1 = NZ_JAPCID010000084.1 Primary Assembly 22237 na Scaffold81_1 unplaced-scaffold na na JAPCID010000085.1 = NZ_JAPCID010000085.1 Primary Assembly 17678 na Scaffold82_1 unplaced-scaffold na na JAPCID010000086.1 = NZ_JAPCID010000086.1 Primary Assembly 15978 na Scaffold83_1 unplaced-scaffold na na JAPCID010000087.1 = NZ_JAPCID010000087.1 Primary Assembly 15672 na Scaffold84_1 unplaced-scaffold na na JAPCID010000088.1 = NZ_JAPCID010000088.1 Primary Assembly 13319 na Scaffold85_1 unplaced-scaffold na na JAPCID010000089.1 = NZ_JAPCID010000089.1 Primary Assembly 13308 na Scaffold86_1 unplaced-scaffold na na JAPCID010000090.1 = NZ_JAPCID010000090.1 Primary Assembly 13215 na Scaffold87_1 unplaced-scaffold na na JAPCID010000091.1 = NZ_JAPCID010000091.1 Primary Assembly 13142 na Scaffold88_1 unplaced-scaffold na na JAPCID010000092.1 = NZ_JAPCID010000092.1 Primary Assembly 13067 na Scaffold89_1 unplaced-scaffold na na JAPCID010000093.1 = NZ_JAPCID010000093.1 Primary Assembly 12838 na Scaffold90_1 unplaced-scaffold na na JAPCID010000094.1 = NZ_JAPCID010000094.1 Primary Assembly 11865 na Scaffold91_1 unplaced-scaffold na na JAPCID010000095.1 = NZ_JAPCID010000095.1 Primary Assembly 10546 na Scaffold92_1 unplaced-scaffold na na JAPCID010000096.1 = NZ_JAPCID010000096.1 Primary Assembly 10318 na Scaffold93_1 unplaced-scaffold na na JAPCID010000097.1 = NZ_JAPCID010000097.1 Primary Assembly 8983 na Scaffold94_1 unplaced-scaffold na na JAPCID010000098.1 = NZ_JAPCID010000098.1 Primary Assembly 8373 na Scaffold95_1 unplaced-scaffold na na JAPCID010000099.1 = NZ_JAPCID010000099.1 Primary Assembly 8055 na Scaffold96_1 unplaced-scaffold na na JAPCID010000100.1 = NZ_JAPCID010000100.1 Primary Assembly 5527 na Scaffold97_1 unplaced-scaffold na na JAPCID010000101.1 = NZ_JAPCID010000101.1 Primary Assembly 5181 na Scaffold98_1 unplaced-scaffold na na JAPCID010000102.1 = NZ_JAPCID010000102.1 Primary Assembly 4653 na Scaffold99_1 unplaced-scaffold na na JAPCID010000103.1 = NZ_JAPCID010000103.1 Primary Assembly 4521 na Scaffold100_1 unplaced-scaffold na na JAPCID010000104.1 = NZ_JAPCID010000104.1 Primary Assembly 4461 na Scaffold101_1 unplaced-scaffold na na JAPCID010000105.1 = NZ_JAPCID010000105.1 Primary Assembly 3909 na Scaffold102_1 unplaced-scaffold na na JAPCID010000106.1 = NZ_JAPCID010000106.1 Primary Assembly 3578 na Scaffold103_1 unplaced-scaffold na na JAPCID010000107.1 = NZ_JAPCID010000107.1 Primary Assembly 3500 na Scaffold104_1 unplaced-scaffold na na JAPCID010000108.1 = NZ_JAPCID010000108.1 Primary Assembly 3405 na Scaffold105_1 unplaced-scaffold na na JAPCID010000109.1 = NZ_JAPCID010000109.1 Primary Assembly 3166 na Scaffold106_1 unplaced-scaffold na na JAPCID010000110.1 = NZ_JAPCID010000110.1 Primary Assembly 2162 na Scaffold107_1 unplaced-scaffold na na JAPCID010000111.1 = NZ_JAPCID010000111.1 Primary Assembly 2079 na Scaffold108_1 unplaced-scaffold na na JAPCID010000112.1 = NZ_JAPCID010000112.1 Primary Assembly 2048 na Scaffold109_1 unplaced-scaffold na na JAPCID010000113.1 = NZ_JAPCID010000113.1 Primary Assembly 1932 na Scaffold110_1 unplaced-scaffold na na JAPCID010000114.1 = NZ_JAPCID010000114.1 Primary Assembly 1882 na Scaffold111_1 unplaced-scaffold na na JAPCID010000115.1 = NZ_JAPCID010000115.1 Primary Assembly 1759 na Scaffold112_1 unplaced-scaffold na na JAPCID010000116.1 = NZ_JAPCID010000116.1 Primary Assembly 1731 na Scaffold113_1 unplaced-scaffold na na JAPCID010000117.1 = NZ_JAPCID010000117.1 Primary Assembly 1682 na Scaffold114_1 unplaced-scaffold na na JAPCID010000118.1 = NZ_JAPCID010000118.1 Primary Assembly 1361 na Scaffold115_1 unplaced-scaffold na na JAPCID010000119.1 = NZ_JAPCID010000119.1 Primary Assembly 1241 na Scaffold116_1 unplaced-scaffold na na JAPCID010000120.1 = NZ_JAPCID010000120.1 Primary Assembly 1069 na Scaffold117_1 unplaced-scaffold na na JAPCID010000121.1 = NZ_JAPCID010000121.1 Primary Assembly 1021 na Scaffold118_1 unplaced-scaffold na na JAPCID010000122.1 = NZ_JAPCID010000122.1 Primary Assembly 1016 na Scaffold119_1 unplaced-scaffold na na JAPCID010000123.1 = NZ_JAPCID010000123.1 Primary Assembly 811 na Scaffold120_1 unplaced-scaffold na na JAPCID010000124.1 = NZ_JAPCID010000124.1 Primary Assembly 763 na Scaffold121_1 unplaced-scaffold na na JAPCID010000125.1 = NZ_JAPCID010000125.1 Primary Assembly 710 na Scaffold122_1 unplaced-scaffold na na JAPCID010000126.1 = NZ_JAPCID010000126.1 Primary Assembly 702 na Scaffold123_1 unplaced-scaffold na na JAPCID010000127.1 = NZ_JAPCID010000127.1 Primary Assembly 624 na Scaffold124_1 unplaced-scaffold na na JAPCID010000128.1 = NZ_JAPCID010000128.1 Primary Assembly 536 na Scaffold125_1 unplaced-scaffold na na JAPCID010000129.1 = NZ_JAPCID010000129.1 Primary Assembly 508 na