# Assembly name: ASM2758720v1 # Organism name: Solirubrobacter ginsenosidimutans (actinobacteria) # Infraspecific name: strain=DSM 21036 # Taxid: 490573 # BioSample: SAMN31521109 # BioProject: PRJNA895699 # Submitter: Chinese Academy of Medical Sciences & Peking Union Medical College # Date: 2023-01-06 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAPDOD01 # Assembly method: SOAPdenovo v. 1.05 # Expected final version: yes # Genome coverage: 132.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_027587205.1 # RefSeq assembly accession: GCF_027587205.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_027587235.1 GCF_027587235.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1_1 unplaced-scaffold na na JAPDOD010000001.1 = NZ_JAPDOD010000001.1 Primary Assembly 553921 na Scaffold2_1 unplaced-scaffold na na JAPDOD010000002.1 = NZ_JAPDOD010000002.1 Primary Assembly 508466 na Scaffold3_1 unplaced-scaffold na na JAPDOD010000003.1 = NZ_JAPDOD010000003.1 Primary Assembly 421794 na Scaffold4_1 unplaced-scaffold na na JAPDOD010000004.1 = NZ_JAPDOD010000004.1 Primary Assembly 369833 na Scaffold5_1 unplaced-scaffold na na JAPDOD010000005.1 = NZ_JAPDOD010000005.1 Primary Assembly 303207 na Scaffold6_1 unplaced-scaffold na na JAPDOD010000006.1 = NZ_JAPDOD010000006.1 Primary Assembly 226223 na Scaffold7_1 unplaced-scaffold na na JAPDOD010000007.1 = NZ_JAPDOD010000007.1 Primary Assembly 199324 na Scaffold8_1 unplaced-scaffold na na JAPDOD010000008.1 = NZ_JAPDOD010000008.1 Primary Assembly 194593 na Scaffold9_1 unplaced-scaffold na na JAPDOD010000009.1 = NZ_JAPDOD010000009.1 Primary Assembly 190916 na Scaffold10_1 unplaced-scaffold na na JAPDOD010000010.1 = NZ_JAPDOD010000010.1 Primary Assembly 62633 na Scaffold10_2 unplaced-scaffold na na JAPDOD010000011.1 = NZ_JAPDOD010000011.1 Primary Assembly 126410 na Scaffold11_1 unplaced-scaffold na na JAPDOD010000012.1 = NZ_JAPDOD010000012.1 Primary Assembly 181926 na Scaffold12_1 unplaced-scaffold na na JAPDOD010000013.1 = NZ_JAPDOD010000013.1 Primary Assembly 181666 na Scaffold13_1 unplaced-scaffold na na JAPDOD010000014.1 = NZ_JAPDOD010000014.1 Primary Assembly 178844 na Scaffold14_1 unplaced-scaffold na na JAPDOD010000015.1 = NZ_JAPDOD010000015.1 Primary Assembly 178679 na Scaffold15_1 unplaced-scaffold na na JAPDOD010000016.1 = NZ_JAPDOD010000016.1 Primary Assembly 175700 na Scaffold16_1 unplaced-scaffold na na JAPDOD010000017.1 = NZ_JAPDOD010000017.1 Primary Assembly 163106 na Scaffold17_1 unplaced-scaffold na na JAPDOD010000018.1 = NZ_JAPDOD010000018.1 Primary Assembly 162853 na Scaffold18_1 unplaced-scaffold na na JAPDOD010000019.1 = NZ_JAPDOD010000019.1 Primary Assembly 158280 na Scaffold19_1 unplaced-scaffold na na JAPDOD010000020.1 = NZ_JAPDOD010000020.1 Primary Assembly 157784 na Scaffold20_1 unplaced-scaffold na na JAPDOD010000021.1 = NZ_JAPDOD010000021.1 Primary Assembly 156810 na Scaffold21_1 unplaced-scaffold na na JAPDOD010000022.1 = NZ_JAPDOD010000022.1 Primary Assembly 156671 na Scaffold22_1 unplaced-scaffold na na JAPDOD010000023.1 = NZ_JAPDOD010000023.1 Primary Assembly 153690 na Scaffold23_1 unplaced-scaffold na na JAPDOD010000024.1 = NZ_JAPDOD010000024.1 Primary Assembly 152496 na Scaffold24_1 unplaced-scaffold na na JAPDOD010000025.1 = NZ_JAPDOD010000025.1 Primary Assembly 131171 na Scaffold25_1 unplaced-scaffold na na JAPDOD010000026.1 = NZ_JAPDOD010000026.1 Primary Assembly 129189 na Scaffold26_1 unplaced-scaffold na na JAPDOD010000027.1 = NZ_JAPDOD010000027.1 Primary Assembly 122510 na Scaffold27_1 unplaced-scaffold na na JAPDOD010000028.1 = NZ_JAPDOD010000028.1 Primary Assembly 121545 na Scaffold28_1 unplaced-scaffold na na JAPDOD010000029.1 = NZ_JAPDOD010000029.1 Primary Assembly 121428 na Scaffold29_1 unplaced-scaffold na na JAPDOD010000030.1 = NZ_JAPDOD010000030.1 Primary Assembly 112738 na Scaffold30_1 unplaced-scaffold na na JAPDOD010000031.1 = NZ_JAPDOD010000031.1 Primary Assembly 112504 na Scaffold31_1 unplaced-scaffold na na JAPDOD010000032.1 = NZ_JAPDOD010000032.1 Primary Assembly 109502 na Scaffold32_1 unplaced-scaffold na na JAPDOD010000033.1 = NZ_JAPDOD010000033.1 Primary Assembly 107764 na Scaffold33_1 unplaced-scaffold na na JAPDOD010000034.1 = NZ_JAPDOD010000034.1 Primary Assembly 104734 na Scaffold34_1 unplaced-scaffold na na JAPDOD010000035.1 = NZ_JAPDOD010000035.1 Primary Assembly 102377 na Scaffold35_1 unplaced-scaffold na na JAPDOD010000036.1 = NZ_JAPDOD010000036.1 Primary Assembly 99024 na Scaffold36_1 unplaced-scaffold na na JAPDOD010000037.1 = NZ_JAPDOD010000037.1 Primary Assembly 97297 na Scaffold37_1 unplaced-scaffold na na JAPDOD010000038.1 = NZ_JAPDOD010000038.1 Primary Assembly 89119 na Scaffold38_1 unplaced-scaffold na na JAPDOD010000039.1 = NZ_JAPDOD010000039.1 Primary Assembly 82938 na Scaffold39_1 unplaced-scaffold na na JAPDOD010000040.1 = NZ_JAPDOD010000040.1 Primary Assembly 80987 na Scaffold40_1 unplaced-scaffold na na JAPDOD010000041.1 = NZ_JAPDOD010000041.1 Primary Assembly 78340 na Scaffold41_1 unplaced-scaffold na na JAPDOD010000042.1 = NZ_JAPDOD010000042.1 Primary Assembly 78060 na Scaffold42_1 unplaced-scaffold na na JAPDOD010000043.1 = NZ_JAPDOD010000043.1 Primary Assembly 77735 na Scaffold43_1 unplaced-scaffold na na JAPDOD010000044.1 = NZ_JAPDOD010000044.1 Primary Assembly 76903 na Scaffold44_1 unplaced-scaffold na na JAPDOD010000045.1 = NZ_JAPDOD010000045.1 Primary Assembly 72603 na Scaffold45_1 unplaced-scaffold na na JAPDOD010000046.1 = NZ_JAPDOD010000046.1 Primary Assembly 71444 na Scaffold46_1 unplaced-scaffold na na JAPDOD010000047.1 = NZ_JAPDOD010000047.1 Primary Assembly 68190 na Scaffold47_1 unplaced-scaffold na na JAPDOD010000048.1 = NZ_JAPDOD010000048.1 Primary Assembly 67013 na Scaffold48_1 unplaced-scaffold na na JAPDOD010000049.1 = NZ_JAPDOD010000049.1 Primary Assembly 66767 na Scaffold49_1 unplaced-scaffold na na JAPDOD010000050.1 = NZ_JAPDOD010000050.1 Primary Assembly 66742 na Scaffold50_1 unplaced-scaffold na na JAPDOD010000051.1 = NZ_JAPDOD010000051.1 Primary Assembly 64484 na Scaffold51_1 unplaced-scaffold na na JAPDOD010000052.1 = NZ_JAPDOD010000052.1 Primary Assembly 62099 na Scaffold52_1 unplaced-scaffold na na JAPDOD010000053.1 = NZ_JAPDOD010000053.1 Primary Assembly 61901 na Scaffold53_1 unplaced-scaffold na na JAPDOD010000054.1 = NZ_JAPDOD010000054.1 Primary Assembly 61164 na Scaffold54_1 unplaced-scaffold na na JAPDOD010000055.1 = NZ_JAPDOD010000055.1 Primary Assembly 58955 na Scaffold55_1 unplaced-scaffold na na JAPDOD010000056.1 = NZ_JAPDOD010000056.1 Primary Assembly 56694 na Scaffold56_1 unplaced-scaffold na na JAPDOD010000057.1 = NZ_JAPDOD010000057.1 Primary Assembly 55687 na Scaffold57_1 unplaced-scaffold na na JAPDOD010000058.1 = NZ_JAPDOD010000058.1 Primary Assembly 55457 na Scaffold58_1 unplaced-scaffold na na JAPDOD010000059.1 = NZ_JAPDOD010000059.1 Primary Assembly 52994 na Scaffold59_1 unplaced-scaffold na na JAPDOD010000060.1 = NZ_JAPDOD010000060.1 Primary Assembly 52267 na Scaffold60_1 unplaced-scaffold na na JAPDOD010000061.1 = NZ_JAPDOD010000061.1 Primary Assembly 52250 na Scaffold61_1 unplaced-scaffold na na JAPDOD010000062.1 = NZ_JAPDOD010000062.1 Primary Assembly 46395 na Scaffold62_1 unplaced-scaffold na na JAPDOD010000063.1 = NZ_JAPDOD010000063.1 Primary Assembly 45859 na Scaffold63_1 unplaced-scaffold na na JAPDOD010000064.1 = NZ_JAPDOD010000064.1 Primary Assembly 45804 na Scaffold64_1 unplaced-scaffold na na JAPDOD010000065.1 = NZ_JAPDOD010000065.1 Primary Assembly 44780 na Scaffold65_1 unplaced-scaffold na na JAPDOD010000066.1 = NZ_JAPDOD010000066.1 Primary Assembly 44717 na Scaffold66_1 unplaced-scaffold na na JAPDOD010000067.1 = NZ_JAPDOD010000067.1 Primary Assembly 43926 na Scaffold67_1 unplaced-scaffold na na JAPDOD010000068.1 = NZ_JAPDOD010000068.1 Primary Assembly 41254 na Scaffold68_1 unplaced-scaffold na na JAPDOD010000069.1 = NZ_JAPDOD010000069.1 Primary Assembly 39978 na Scaffold69_1 unplaced-scaffold na na JAPDOD010000070.1 = NZ_JAPDOD010000070.1 Primary Assembly 38686 na Scaffold70_1 unplaced-scaffold na na JAPDOD010000071.1 = NZ_JAPDOD010000071.1 Primary Assembly 36085 na Scaffold71_1 unplaced-scaffold na na JAPDOD010000072.1 = NZ_JAPDOD010000072.1 Primary Assembly 34895 na Scaffold72_1 unplaced-scaffold na na JAPDOD010000073.1 = NZ_JAPDOD010000073.1 Primary Assembly 34863 na Scaffold73_1 unplaced-scaffold na na JAPDOD010000074.1 = NZ_JAPDOD010000074.1 Primary Assembly 34301 na Scaffold74_1 unplaced-scaffold na na JAPDOD010000075.1 = NZ_JAPDOD010000075.1 Primary Assembly 33008 na Scaffold75_1 unplaced-scaffold na na JAPDOD010000076.1 = NZ_JAPDOD010000076.1 Primary Assembly 32997 na Scaffold76_1 unplaced-scaffold na na JAPDOD010000077.1 = NZ_JAPDOD010000077.1 Primary Assembly 32948 na Scaffold77_1 unplaced-scaffold na na JAPDOD010000078.1 = NZ_JAPDOD010000078.1 Primary Assembly 32744 na Scaffold78_1 unplaced-scaffold na na JAPDOD010000079.1 = NZ_JAPDOD010000079.1 Primary Assembly 32057 na Scaffold79_1 unplaced-scaffold na na JAPDOD010000080.1 = NZ_JAPDOD010000080.1 Primary Assembly 31473 na Scaffold80_1 unplaced-scaffold na na JAPDOD010000081.1 = NZ_JAPDOD010000081.1 Primary Assembly 30427 na Scaffold81_1 unplaced-scaffold na na JAPDOD010000082.1 = NZ_JAPDOD010000082.1 Primary Assembly 30287 na Scaffold82_1 unplaced-scaffold na na JAPDOD010000083.1 = NZ_JAPDOD010000083.1 Primary Assembly 29144 na Scaffold83_1 unplaced-scaffold na na JAPDOD010000084.1 = NZ_JAPDOD010000084.1 Primary Assembly 28982 na Scaffold84_1 unplaced-scaffold na na JAPDOD010000085.1 = NZ_JAPDOD010000085.1 Primary Assembly 27864 na Scaffold85_1 unplaced-scaffold na na JAPDOD010000086.1 = NZ_JAPDOD010000086.1 Primary Assembly 27074 na Scaffold86_1 unplaced-scaffold na na JAPDOD010000087.1 = NZ_JAPDOD010000087.1 Primary Assembly 26841 na Scaffold87_1 unplaced-scaffold na na JAPDOD010000088.1 = NZ_JAPDOD010000088.1 Primary Assembly 26662 na Scaffold88_1 unplaced-scaffold na na JAPDOD010000089.1 = NZ_JAPDOD010000089.1 Primary Assembly 22870 na Scaffold89_1 unplaced-scaffold na na JAPDOD010000090.1 = NZ_JAPDOD010000090.1 Primary Assembly 21298 na Scaffold90_1 unplaced-scaffold na na JAPDOD010000091.1 = NZ_JAPDOD010000091.1 Primary Assembly 19554 na Scaffold91_1 unplaced-scaffold na na JAPDOD010000092.1 = NZ_JAPDOD010000092.1 Primary Assembly 17567 na Scaffold92_1 unplaced-scaffold na na JAPDOD010000093.1 = NZ_JAPDOD010000093.1 Primary Assembly 17565 na Scaffold93_1 unplaced-scaffold na na JAPDOD010000094.1 = NZ_JAPDOD010000094.1 Primary Assembly 17519 na Scaffold94_1 unplaced-scaffold na na JAPDOD010000095.1 = NZ_JAPDOD010000095.1 Primary Assembly 16153 na Scaffold95_1 unplaced-scaffold na na JAPDOD010000096.1 = NZ_JAPDOD010000096.1 Primary Assembly 14710 na Scaffold96_1 unplaced-scaffold na na JAPDOD010000097.1 = NZ_JAPDOD010000097.1 Primary Assembly 14045 na Scaffold97_1 unplaced-scaffold na na JAPDOD010000098.1 = NZ_JAPDOD010000098.1 Primary Assembly 13792 na Scaffold98_1 unplaced-scaffold na na JAPDOD010000099.1 = NZ_JAPDOD010000099.1 Primary Assembly 11910 na Scaffold99_1 unplaced-scaffold na na JAPDOD010000100.1 = NZ_JAPDOD010000100.1 Primary Assembly 11849 na Scaffold100_1 unplaced-scaffold na na JAPDOD010000101.1 = NZ_JAPDOD010000101.1 Primary Assembly 10581 na Scaffold101_1 unplaced-scaffold na na JAPDOD010000102.1 = NZ_JAPDOD010000102.1 Primary Assembly 10302 na Scaffold102_1 unplaced-scaffold na na JAPDOD010000103.1 = NZ_JAPDOD010000103.1 Primary Assembly 9403 na Scaffold103_1 unplaced-scaffold na na JAPDOD010000104.1 = NZ_JAPDOD010000104.1 Primary Assembly 9358 na Scaffold104_1 unplaced-scaffold na na JAPDOD010000105.1 = NZ_JAPDOD010000105.1 Primary Assembly 7542 na Scaffold105_1 unplaced-scaffold na na JAPDOD010000106.1 = NZ_JAPDOD010000106.1 Primary Assembly 7312 na Scaffold106_1 unplaced-scaffold na na JAPDOD010000107.1 = NZ_JAPDOD010000107.1 Primary Assembly 6731 na Scaffold107_1 unplaced-scaffold na na JAPDOD010000108.1 = NZ_JAPDOD010000108.1 Primary Assembly 6359 na Scaffold108_1 unplaced-scaffold na na JAPDOD010000109.1 = NZ_JAPDOD010000109.1 Primary Assembly 5686 na Scaffold109_1 unplaced-scaffold na na JAPDOD010000110.1 = NZ_JAPDOD010000110.1 Primary Assembly 4603 na Scaffold110_1 unplaced-scaffold na na JAPDOD010000111.1 = NZ_JAPDOD010000111.1 Primary Assembly 4309 na Scaffold111_1 unplaced-scaffold na na JAPDOD010000112.1 = NZ_JAPDOD010000112.1 Primary Assembly 4028 na Scaffold112_1 unplaced-scaffold na na JAPDOD010000113.1 = NZ_JAPDOD010000113.1 Primary Assembly 3615 na Scaffold113_1 unplaced-scaffold na na JAPDOD010000114.1 = NZ_JAPDOD010000114.1 Primary Assembly 3399 na Scaffold114_1 unplaced-scaffold na na JAPDOD010000115.1 = NZ_JAPDOD010000115.1 Primary Assembly 2676 na Scaffold115_1 unplaced-scaffold na na JAPDOD010000116.1 = NZ_JAPDOD010000116.1 Primary Assembly 2547 na Scaffold116_1 unplaced-scaffold na na JAPDOD010000117.1 = NZ_JAPDOD010000117.1 Primary Assembly 2507 na Scaffold117_1 unplaced-scaffold na na JAPDOD010000118.1 = NZ_JAPDOD010000118.1 Primary Assembly 2396 na Scaffold118_1 unplaced-scaffold na na JAPDOD010000119.1 = NZ_JAPDOD010000119.1 Primary Assembly 2308 na Scaffold119_1 unplaced-scaffold na na JAPDOD010000120.1 = NZ_JAPDOD010000120.1 Primary Assembly 2172 na Scaffold120_1 unplaced-scaffold na na JAPDOD010000121.1 = NZ_JAPDOD010000121.1 Primary Assembly 2152 na Scaffold121_1 unplaced-scaffold na na JAPDOD010000122.1 = NZ_JAPDOD010000122.1 Primary Assembly 1992 na Scaffold122_1 unplaced-scaffold na na JAPDOD010000123.1 = NZ_JAPDOD010000123.1 Primary Assembly 1921 na Scaffold123_1 unplaced-scaffold na na JAPDOD010000124.1 = NZ_JAPDOD010000124.1 Primary Assembly 1850 na Scaffold124_1 unplaced-scaffold na na JAPDOD010000125.1 = NZ_JAPDOD010000125.1 Primary Assembly 1765 na Scaffold125_1 unplaced-scaffold na na JAPDOD010000126.1 = NZ_JAPDOD010000126.1 Primary Assembly 1536 na Scaffold126_1 unplaced-scaffold na na JAPDOD010000127.1 = NZ_JAPDOD010000127.1 Primary Assembly 1501 na Scaffold127_1 unplaced-scaffold na na JAPDOD010000128.1 = NZ_JAPDOD010000128.1 Primary Assembly 1402 na Scaffold128_1 unplaced-scaffold na na JAPDOD010000129.1 = NZ_JAPDOD010000129.1 Primary Assembly 1335 na Scaffold129_1 unplaced-scaffold na na JAPDOD010000130.1 = NZ_JAPDOD010000130.1 Primary Assembly 1326 na Scaffold130_1 unplaced-scaffold na na JAPDOD010000131.1 = NZ_JAPDOD010000131.1 Primary Assembly 1246 na Scaffold131_1 unplaced-scaffold na na JAPDOD010000132.1 = NZ_JAPDOD010000132.1 Primary Assembly 1136 na Scaffold132_1 unplaced-scaffold na na JAPDOD010000133.1 = NZ_JAPDOD010000133.1 Primary Assembly 1086 na Scaffold133_1 unplaced-scaffold na na JAPDOD010000134.1 = NZ_JAPDOD010000134.1 Primary Assembly 1085 na Scaffold134_1 unplaced-scaffold na na JAPDOD010000135.1 = NZ_JAPDOD010000135.1 Primary Assembly 1018 na Scaffold135_1 unplaced-scaffold na na JAPDOD010000136.1 = NZ_JAPDOD010000136.1 Primary Assembly 958 na Scaffold136_1 unplaced-scaffold na na JAPDOD010000137.1 = NZ_JAPDOD010000137.1 Primary Assembly 935 na Scaffold137_1 unplaced-scaffold na na JAPDOD010000138.1 = NZ_JAPDOD010000138.1 Primary Assembly 829 na Scaffold138_1 unplaced-scaffold na na JAPDOD010000139.1 = NZ_JAPDOD010000139.1 Primary Assembly 778 na Scaffold139_1 unplaced-scaffold na na JAPDOD010000140.1 = NZ_JAPDOD010000140.1 Primary Assembly 755 na Scaffold140_1 unplaced-scaffold na na JAPDOD010000141.1 = NZ_JAPDOD010000141.1 Primary Assembly 709 na Scaffold141_1 unplaced-scaffold na na JAPDOD010000142.1 = NZ_JAPDOD010000142.1 Primary Assembly 689 na Scaffold142_1 unplaced-scaffold na na JAPDOD010000143.1 = NZ_JAPDOD010000143.1 Primary Assembly 660 na Scaffold143_1 unplaced-scaffold na na JAPDOD010000144.1 = NZ_JAPDOD010000144.1 Primary Assembly 580 na Scaffold144_1 unplaced-scaffold na na JAPDOD010000145.1 = NZ_JAPDOD010000145.1 Primary Assembly 578 na Scaffold145_1 unplaced-scaffold na na JAPDOD010000146.1 = NZ_JAPDOD010000146.1 Primary Assembly 573 na Scaffold146_1 unplaced-scaffold na na JAPDOD010000147.1 = NZ_JAPDOD010000147.1 Primary Assembly 568 na Scaffold147_1 unplaced-scaffold na na JAPDOD010000148.1 = NZ_JAPDOD010000148.1 Primary Assembly 558 na