# Assembly name:  RoL_Sspl_1.0
# Organism name:  Synchiropus splendidus (mandarinfish)
# Isolate:  RoL2022-P1
# Sex:  male
# Taxid:          270530
# BioSample:      SAMN31865018
# BioProject:     PRJNA851781
# Submitter:      University of Idaho at Moscow
# Date:           2023-01-13
# Assembly type:  haploid
# Release type:   minor
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JAPTFM01
# Assembly method: Hifiasm v. 0.16.1
# Expected final version: no
# Genome coverage: 100.0x
# Sequencing technology: Pacbio HiFi; Phase Genomics Hi-C
# RefSeq category: Representative Genome
# GenBank assembly accession: GCA_027744825.1
# RefSeq assembly accession: GCF_027744825.2
# RefSeq assembly and GenBank assemblies identical: no
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_027744955.1	GCF_027744955.1	Primary Assembly
## 	GCF_028744515.1	non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
HiC_scaffold_1	assembled-molecule	1	Chromosome	CM050959.1	=	NC_071334.1	Primary Assembly	71620908	na
HiC_scaffold_2	assembled-molecule	2	Chromosome	CM050960.1	=	NC_071335.1	Primary Assembly	43131703	na
HiC_scaffold_3	assembled-molecule	3	Chromosome	CM050961.1	=	NC_071336.1	Primary Assembly	36562627	na
HiC_scaffold_4	assembled-molecule	4	Chromosome	CM050962.1	=	NC_071337.1	Primary Assembly	36510946	na
HiC_scaffold_5	assembled-molecule	5	Chromosome	CM050963.1	=	NC_071338.1	Primary Assembly	34533849	na
HiC_scaffold_6	assembled-molecule	6	Chromosome	CM050964.1	=	NC_071339.1	Primary Assembly	28855288	na
HiC_scaffold_7	assembled-molecule	7	Chromosome	CM050965.1	=	NC_071340.1	Primary Assembly	28272796	na
HiC_scaffold_8	assembled-molecule	8	Chromosome	CM050966.1	=	NC_071341.1	Primary Assembly	26259131	na
HiC_scaffold_9	assembled-molecule	9	Chromosome	CM050967.1	=	NC_071342.1	Primary Assembly	25760230	na
HiC_scaffold_10	assembled-molecule	10	Chromosome	CM050968.1	=	NC_071343.1	Primary Assembly	25476212	na
HiC_scaffold_11	assembled-molecule	11	Chromosome	CM050969.1	=	NC_071344.1	Primary Assembly	25349683	na
HiC_scaffold_12	assembled-molecule	12	Chromosome	CM050970.1	=	NC_071345.1	Primary Assembly	25151072	na
HiC_scaffold_13	assembled-molecule	13	Chromosome	CM050971.1	=	NC_071346.1	Primary Assembly	24719204	na
HiC_scaffold_14	assembled-molecule	14	Chromosome	CM050972.1	=	NC_071347.1	Primary Assembly	24363038	na
HiC_scaffold_15	assembled-molecule	15	Chromosome	CM050973.1	=	NC_071348.1	Primary Assembly	22584201	na
HiC_scaffold_16	assembled-molecule	16	Chromosome	CM050974.1	=	NC_071349.1	Primary Assembly	21100824	na
HiC_scaffold_17	assembled-molecule	17	Chromosome	CM050975.1	=	NC_071350.1	Primary Assembly	20772013	na
HiC_scaffold_18	assembled-molecule	18	Chromosome	CM050976.1	=	NC_071351.1	Primary Assembly	19086417	na
HiC_scaffold_19	assembled-molecule	19	Chromosome	CM050977.1	=	NC_071352.1	Primary Assembly	18015142	na
HiC_scaffold_20	unplaced-scaffold	na	na	JAPTFM010000020.1	=	NW_026527054.1	Primary Assembly	2534683	na
HiC_scaffold_21	unplaced-scaffold	na	na	JAPTFM010000021.1	=	NW_026527055.1	Primary Assembly	2257848	na
HiC_scaffold_22	unplaced-scaffold	na	na	JAPTFM010000022.1	=	NW_026527056.1	Primary Assembly	1618331	na
HiC_scaffold_23	unplaced-scaffold	na	na	JAPTFM010000023.1	=	NW_026527057.1	Primary Assembly	1564018	na
HiC_scaffold_24	unplaced-scaffold	na	na	JAPTFM010000024.1	=	NW_026527058.1	Primary Assembly	978490	na
HiC_scaffold_25	unplaced-scaffold	na	na	JAPTFM010000025.1	=	NW_026527059.1	Primary Assembly	977927	na
HiC_scaffold_26	unplaced-scaffold	na	na	JAPTFM010000026.1	=	NW_026527060.1	Primary Assembly	815517	na
HiC_scaffold_27	unplaced-scaffold	na	na	JAPTFM010000027.1	=	NW_026527061.1	Primary Assembly	806497	na
HiC_scaffold_28	unplaced-scaffold	na	na	JAPTFM010000028.1	=	NW_026527062.1	Primary Assembly	715173	na
HiC_scaffold_29	unplaced-scaffold	na	na	JAPTFM010000029.1	=	NW_026527063.1	Primary Assembly	687552	na
HiC_scaffold_30	unplaced-scaffold	na	na	JAPTFM010000030.1	=	NW_026527064.1	Primary Assembly	657721	na
HiC_scaffold_31	unplaced-scaffold	na	na	JAPTFM010000031.1	=	NW_026527065.1	Primary Assembly	646039	na
HiC_scaffold_32	unplaced-scaffold	na	na	JAPTFM010000032.1	=	NW_026527066.1	Primary Assembly	640369	na
HiC_scaffold_33	unplaced-scaffold	na	na	JAPTFM010000033.1	=	NW_026527067.1	Primary Assembly	630505	na
HiC_scaffold_34	unplaced-scaffold	na	na	JAPTFM010000034.1	=	NW_026527068.1	Primary Assembly	598824	na
HiC_scaffold_35	unplaced-scaffold	na	na	JAPTFM010000035.1	=	NW_026527069.1	Primary Assembly	572459	na
HiC_scaffold_36	unplaced-scaffold	na	na	JAPTFM010000036.1	=	NW_026527070.1	Primary Assembly	492740	na
HiC_scaffold_37	unplaced-scaffold	na	na	JAPTFM010000037.1	=	NW_026527071.1	Primary Assembly	445041	na
HiC_scaffold_38	unplaced-scaffold	na	na	JAPTFM010000038.1	=	NW_026527072.1	Primary Assembly	441794	na
HiC_scaffold_39	unplaced-scaffold	na	na	JAPTFM010000039.1	=	NW_026527073.1	Primary Assembly	411289	na
HiC_scaffold_40	unplaced-scaffold	na	na	JAPTFM010000040.1	=	NW_026527074.1	Primary Assembly	372600	na
HiC_scaffold_41	unplaced-scaffold	na	na	JAPTFM010000041.1	=	NW_026527075.1	Primary Assembly	364546	na
HiC_scaffold_42	unplaced-scaffold	na	na	JAPTFM010000042.1	=	NW_026527076.1	Primary Assembly	336552	na
HiC_scaffold_43	unplaced-scaffold	na	na	JAPTFM010000043.1	=	NW_026527077.1	Primary Assembly	293252	na
HiC_scaffold_44	unplaced-scaffold	na	na	JAPTFM010000044.1	=	NW_026527078.1	Primary Assembly	283888	na
HiC_scaffold_45	unplaced-scaffold	na	na	JAPTFM010000045.1	=	NW_026527079.1	Primary Assembly	279069	na
HiC_scaffold_46	unplaced-scaffold	na	na	JAPTFM010000046.1	=	NW_026527080.1	Primary Assembly	277634	na
HiC_scaffold_47	unplaced-scaffold	na	na	JAPTFM010000047.1	=	NW_026527081.1	Primary Assembly	277448	na
HiC_scaffold_48	unplaced-scaffold	na	na	JAPTFM010000048.1	=	NW_026527082.1	Primary Assembly	267689	na
HiC_scaffold_49	unplaced-scaffold	na	na	JAPTFM010000049.1	=	NW_026527083.1	Primary Assembly	254682	na
HiC_scaffold_50	unplaced-scaffold	na	na	JAPTFM010000050.1	=	NW_026527084.1	Primary Assembly	220348	na
HiC_scaffold_51	unplaced-scaffold	na	na	JAPTFM010000051.1	=	NW_026527085.1	Primary Assembly	205408	na
HiC_scaffold_52	unplaced-scaffold	na	na	JAPTFM010000052.1	=	NW_026527086.1	Primary Assembly	204234	na
HiC_scaffold_53	unplaced-scaffold	na	na	JAPTFM010000053.1	=	NW_026527087.1	Primary Assembly	194921	na
HiC_scaffold_54	unplaced-scaffold	na	na	JAPTFM010000054.1	=	NW_026527088.1	Primary Assembly	193507	na
HiC_scaffold_55	unplaced-scaffold	na	na	JAPTFM010000055.1	=	NW_026527089.1	Primary Assembly	169977	na
HiC_scaffold_56	unplaced-scaffold	na	na	JAPTFM010000056.1	=	NW_026527090.1	Primary Assembly	164074	na
HiC_scaffold_57	unplaced-scaffold	na	na	JAPTFM010000057.1	=	NW_026527091.1	Primary Assembly	149699	na
HiC_scaffold_58	unplaced-scaffold	na	na	JAPTFM010000058.1	=	NW_026527092.1	Primary Assembly	145904	na
HiC_scaffold_59	unplaced-scaffold	na	na	JAPTFM010000059.1	=	NW_026527093.1	Primary Assembly	126156	na
HiC_scaffold_60	unplaced-scaffold	na	na	JAPTFM010000060.1	=	NW_026527094.1	Primary Assembly	124047	na
HiC_scaffold_61	unplaced-scaffold	na	na	JAPTFM010000061.1	=	NW_026527095.1	Primary Assembly	118694	na
HiC_scaffold_62	unplaced-scaffold	na	na	JAPTFM010000062.1	=	NW_026527096.1	Primary Assembly	115954	na
HiC_scaffold_63	unplaced-scaffold	na	na	JAPTFM010000063.1	=	NW_026527097.1	Primary Assembly	109164	na
HiC_scaffold_64	unplaced-scaffold	na	na	JAPTFM010000064.1	=	NW_026527098.1	Primary Assembly	105631	na
HiC_scaffold_65	unplaced-scaffold	na	na	JAPTFM010000065.1	=	NW_026527099.1	Primary Assembly	79101	na
HiC_scaffold_66	unplaced-scaffold	na	na	JAPTFM010000066.1	=	NW_026527100.1	Primary Assembly	75567	na
HiC_scaffold_67	unplaced-scaffold	na	na	JAPTFM010000067.1	=	NW_026527101.1	Primary Assembly	65419	na
HiC_scaffold_68	unplaced-scaffold	na	na	JAPTFM010000068.1	=	NW_026527102.1	Primary Assembly	62241	na
HiC_scaffold_69	unplaced-scaffold	na	na	JAPTFM010000069.1	=	NW_026527103.1	Primary Assembly	37758	na
HiC_scaffold_70	unplaced-scaffold	na	na	JAPTFM010000070.1	=	NW_026527104.1	Primary Assembly	35805	na
HiC_scaffold_71	unplaced-scaffold	na	na	JAPTFM010000071.1	=	NW_026527105.1	Primary Assembly	26687	na
HiC_scaffold_72	unplaced-scaffold	na	na	JAPTFM010000072.1	=	NW_026527106.1	Primary Assembly	25297	na
HiC_scaffold_73	unplaced-scaffold	na	na	JAPTFM010000073.1	=	NW_026527107.1	Primary Assembly	25037	na
HiC_scaffold_74	unplaced-scaffold	na	na	JAPTFM010000074.1	=	NW_026527108.1	Primary Assembly	23911	na
HiC_scaffold_75	unplaced-scaffold	na	na	JAPTFM010000075.1	=	NW_026527109.1	Primary Assembly	23651	na
HiC_scaffold_76	unplaced-scaffold	na	na	JAPTFM010000076.1	=	NW_026527110.1	Primary Assembly	23517	na
HiC_scaffold_77	unplaced-scaffold	na	na	JAPTFM010000077.1	=	NW_026527111.1	Primary Assembly	23167	na
HiC_scaffold_78	unplaced-scaffold	na	na	JAPTFM010000078.1	=	NW_026527112.1	Primary Assembly	22941	na
HiC_scaffold_79	unplaced-scaffold	na	na	JAPTFM010000079.1	=	NW_026527113.1	Primary Assembly	22723	na
HiC_scaffold_80	unplaced-scaffold	na	na	JAPTFM010000080.1	=	NW_026527114.1	Primary Assembly	22708	na
HiC_scaffold_81	unplaced-scaffold	na	na	JAPTFM010000081.1	=	NW_026527115.1	Primary Assembly	22605	na
HiC_scaffold_82	unplaced-scaffold	na	na	JAPTFM010000082.1	=	NW_026527116.1	Primary Assembly	22126	na
HiC_scaffold_83	unplaced-scaffold	na	na	JAPTFM010000083.1	=	NW_026527117.1	Primary Assembly	22024	na
HiC_scaffold_84	unplaced-scaffold	na	na	JAPTFM010000084.1	=	NW_026527118.1	Primary Assembly	21779	na
HiC_scaffold_85	unplaced-scaffold	na	na	JAPTFM010000085.1	=	NW_026527119.1	Primary Assembly	21179	na
HiC_scaffold_86	unplaced-scaffold	na	na	JAPTFM010000086.1	=	NW_026527120.1	Primary Assembly	20692	na
HiC_scaffold_87	unplaced-scaffold	na	na	JAPTFM010000087.1	=	NW_026527121.1	Primary Assembly	20360	na
HiC_scaffold_88	unplaced-scaffold	na	na	JAPTFM010000088.1	=	NW_026527122.1	Primary Assembly	20258	na
HiC_scaffold_89	unplaced-scaffold	na	na	JAPTFM010000089.1	=	NW_026527123.1	Primary Assembly	19773	na
HiC_scaffold_90	unplaced-scaffold	na	na	JAPTFM010000090.1	=	NW_026527124.1	Primary Assembly	19159	na
HiC_scaffold_91	unplaced-scaffold	na	na	JAPTFM010000091.1	=	NW_026527125.1	Primary Assembly	19108	na
HiC_scaffold_92	unplaced-scaffold	na	na	JAPTFM010000092.1	=	NW_026527126.1	Primary Assembly	18023	na
HiC_scaffold_93	unplaced-scaffold	na	na	JAPTFM010000093.1	=	NW_026527127.1	Primary Assembly	17089	na
HiC_scaffold_94	unplaced-scaffold	na	na	JAPTFM010000094.1	=	NW_026527128.1	Primary Assembly	16969	na
HiC_scaffold_95	unplaced-scaffold	na	na	JAPTFM010000095.1	=	NW_026527129.1	Primary Assembly	16513	na
HiC_scaffold_96	unplaced-scaffold	na	na	JAPTFM010000096.1	=	NW_026527130.1	Primary Assembly	15460	na
MT	assembled-molecule	MT	Mitochondrion	na	<>	NC_024195.1	non-nuclear	16430	na