# Assembly name: ASM2988218v1 # Organism name: Nitrosopumilus sp. (archaea) # Isolate: 8_1_Jan_SF_Bin66 # Taxid: 2024843 # BioSample: SAMN30443103 # BioProject: PRJNA865744 # Submitter: University of Texas - Austin, Baker Lab # Date: 2023-04-26 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAOULD01 # Assembly method: SPAdes v. 3.11.1 # Expected final version: yes # Genome coverage: 17.570111800409x # Sequencing technology: Illumina HiSeq # Excluded from RefSeq: derived from metagenome # GenBank assembly accession: GCA_029882185.1 # RefSeq assembly accession: GCF_029882185.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_029882195.1 GCF_029882195.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 8_1_Jan_SF_Bin66_scaffold_10218_c1 unplaced-scaffold na na JAOULD010000064.1 = NZ_JAOULD010000064.1 Primary Assembly 5499 na 8_1_Jan_SF_Bin66_scaffold_1033_c1 unplaced-scaffold na na JAOULD010000019.1 = NZ_JAOULD010000019.1 Primary Assembly 20592 na 8_1_Jan_SF_Bin66_scaffold_1045_c1 unplaced-scaffold na na JAOULD010000020.1 = NZ_JAOULD010000020.1 Primary Assembly 20466 na 8_1_Jan_SF_Bin66_scaffold_10627_c1 unplaced-scaffold na na JAOULD010000065.1 = NZ_JAOULD010000065.1 Primary Assembly 5358 na 8_1_Jan_SF_Bin66_scaffold_10980_c1 unplaced-scaffold na na JAOULD010000066.1 = NZ_JAOULD010000066.1 Primary Assembly 5252 na 8_1_Jan_SF_Bin66_scaffold_1122_c1 unplaced-scaffold na na JAOULD010000021.1 = NZ_JAOULD010000021.1 Primary Assembly 19617 na 8_1_Jan_SF_Bin66_scaffold_115_c1 unplaced-scaffold na na JAOULD010000004.1 = NZ_JAOULD010000004.1 Primary Assembly 77654 na 8_1_Jan_SF_Bin66_scaffold_11600_c1 unplaced-scaffold na na JAOULD010000067.1 = NZ_JAOULD010000067.1 Primary Assembly 5079 na 8_1_Jan_SF_Bin66_scaffold_11959_c1 unplaced-scaffold na na JAOULD010000068.1 = NZ_JAOULD010000068.1 Primary Assembly 4992 na 8_1_Jan_SF_Bin66_scaffold_1206_c1 unplaced-scaffold na na JAOULD010000022.1 = NZ_JAOULD010000022.1 Primary Assembly 18853 na 8_1_Jan_SF_Bin66_scaffold_12181_c1 unplaced-scaffold na na JAOULD010000069.1 = NZ_JAOULD010000069.1 Primary Assembly 4933 na 8_1_Jan_SF_Bin66_scaffold_12256_c1 unplaced-scaffold na na JAOULD010000070.1 = NZ_JAOULD010000070.1 Primary Assembly 4918 na 8_1_Jan_SF_Bin66_scaffold_1264_c1 unplaced-scaffold na na JAOULD010000023.1 = NZ_JAOULD010000023.1 Primary Assembly 18294 na 8_1_Jan_SF_Bin66_scaffold_12661_c1 unplaced-scaffold na na JAOULD010000071.1 = NZ_JAOULD010000071.1 Primary Assembly 4815 na 8_1_Jan_SF_Bin66_scaffold_12835_c1 unplaced-scaffold na na JAOULD010000072.1 = NZ_JAOULD010000072.1 Primary Assembly 4776 na 8_1_Jan_SF_Bin66_scaffold_13063_c1 unplaced-scaffold na na JAOULD010000073.1 = NZ_JAOULD010000073.1 Primary Assembly 4723 na 8_1_Jan_SF_Bin66_scaffold_134_c1 unplaced-scaffold na na JAOULD010000005.1 = NZ_JAOULD010000005.1 Primary Assembly 72105 na 8_1_Jan_SF_Bin66_scaffold_1395_c1 unplaced-scaffold na na JAOULD010000024.1 = NZ_JAOULD010000024.1 Primary Assembly 17471 na 8_1_Jan_SF_Bin66_scaffold_142_c1 unplaced-scaffold na na JAOULD010000006.1 = NZ_JAOULD010000006.1 Primary Assembly 71381 na 8_1_Jan_SF_Bin66_scaffold_14359_c1 unplaced-scaffold na na JAOULD010000074.1 = NZ_JAOULD010000074.1 Primary Assembly 4450 na 8_1_Jan_SF_Bin66_scaffold_159_c1 unplaced-scaffold na na JAOULD010000013.1 = NZ_JAOULD010000013.1 Primary Assembly 42518 na 8_1_Jan_SF_Bin66_scaffold_159_c2 unplaced-scaffold na na JAOULD010000018.1 = NZ_JAOULD010000018.1 Primary Assembly 24958 na 8_1_Jan_SF_Bin66_scaffold_16100_c1 unplaced-scaffold na na JAOULD010000075.1 = NZ_JAOULD010000075.1 Primary Assembly 4147 na 8_1_Jan_SF_Bin66_scaffold_1610_c1 unplaced-scaffold na na JAOULD010000026.1 = NZ_JAOULD010000026.1 Primary Assembly 16059 na 8_1_Jan_SF_Bin66_scaffold_16192_c1 unplaced-scaffold na na JAOULD010000076.1 = NZ_JAOULD010000076.1 Primary Assembly 4132 na 8_1_Jan_SF_Bin66_scaffold_16230_c1 unplaced-scaffold na na JAOULD010000077.1 = NZ_JAOULD010000077.1 Primary Assembly 4127 na 8_1_Jan_SF_Bin66_scaffold_16498_c1 unplaced-scaffold na na JAOULD010000078.1 = NZ_JAOULD010000078.1 Primary Assembly 4088 na 8_1_Jan_SF_Bin66_scaffold_1701_c1 unplaced-scaffold na na JAOULD010000027.1 = NZ_JAOULD010000027.1 Primary Assembly 15612 na 8_1_Jan_SF_Bin66_scaffold_1767_c1 unplaced-scaffold na na JAOULD010000028.1 = NZ_JAOULD010000028.1 Primary Assembly 15329 na 8_1_Jan_SF_Bin66_scaffold_1858_c1 unplaced-scaffold na na JAOULD010000029.1 = NZ_JAOULD010000029.1 Primary Assembly 14904 na 8_1_Jan_SF_Bin66_scaffold_19880_c1 unplaced-scaffold na na JAOULD010000079.1 = NZ_JAOULD010000079.1 Primary Assembly 3648 na 8_1_Jan_SF_Bin66_scaffold_20437_c1 unplaced-scaffold na na JAOULD010000080.1 = NZ_JAOULD010000080.1 Primary Assembly 3586 na 8_1_Jan_SF_Bin66_scaffold_20497_c1 unplaced-scaffold na na JAOULD010000081.1 = NZ_JAOULD010000081.1 Primary Assembly 3579 na 8_1_Jan_SF_Bin66_scaffold_20688_c1 unplaced-scaffold na na JAOULD010000082.1 = NZ_JAOULD010000082.1 Primary Assembly 3559 na 8_1_Jan_SF_Bin66_scaffold_207_c1 unplaced-scaffold na na JAOULD010000007.1 = NZ_JAOULD010000007.1 Primary Assembly 57507 na 8_1_Jan_SF_Bin66_scaffold_20810_c1 unplaced-scaffold na na JAOULD010000083.1 = NZ_JAOULD010000083.1 Primary Assembly 3547 na 8_1_Jan_SF_Bin66_scaffold_21779_c1 unplaced-scaffold na na JAOULD010000084.1 = NZ_JAOULD010000084.1 Primary Assembly 3451 na 8_1_Jan_SF_Bin66_scaffold_2346_c1 unplaced-scaffold na na JAOULD010000030.1 = NZ_JAOULD010000030.1 Primary Assembly 12959 na 8_1_Jan_SF_Bin66_scaffold_2409_c1 unplaced-scaffold na na JAOULD010000031.1 = NZ_JAOULD010000031.1 Primary Assembly 12771 na 8_1_Jan_SF_Bin66_scaffold_24667_c1 unplaced-scaffold na na JAOULD010000085.1 = NZ_JAOULD010000085.1 Primary Assembly 3202 na 8_1_Jan_SF_Bin66_scaffold_2487_c1 unplaced-scaffold na na JAOULD010000032.1 = NZ_JAOULD010000032.1 Primary Assembly 12580 na 8_1_Jan_SF_Bin66_scaffold_2501_c1 unplaced-scaffold na na JAOULD010000033.1 = NZ_JAOULD010000033.1 Primary Assembly 12536 na 8_1_Jan_SF_Bin66_scaffold_2541_c1 unplaced-scaffold na na JAOULD010000034.1 = NZ_JAOULD010000034.1 Primary Assembly 12429 na 8_1_Jan_SF_Bin66_scaffold_265_c1 unplaced-scaffold na na JAOULD010000008.1 = NZ_JAOULD010000008.1 Primary Assembly 49925 na 8_1_Jan_SF_Bin66_scaffold_2682_c1 unplaced-scaffold na na JAOULD010000035.1 = NZ_JAOULD010000035.1 Primary Assembly 12071 na 8_1_Jan_SF_Bin66_scaffold_2717_c1 unplaced-scaffold na na JAOULD010000036.1 = NZ_JAOULD010000036.1 Primary Assembly 11998 na 8_1_Jan_SF_Bin66_scaffold_27587_c1 unplaced-scaffold na na JAOULD010000086.1 = NZ_JAOULD010000086.1 Primary Assembly 2995 na 8_1_Jan_SF_Bin66_scaffold_27815_c1 unplaced-scaffold na na JAOULD010000087.1 = NZ_JAOULD010000087.1 Primary Assembly 2981 na 8_1_Jan_SF_Bin66_scaffold_281_c1 unplaced-scaffold na na JAOULD010000009.1 = NZ_JAOULD010000009.1 Primary Assembly 47768 na 8_1_Jan_SF_Bin66_scaffold_28271_c1 unplaced-scaffold na na JAOULD010000088.1 = NZ_JAOULD010000088.1 Primary Assembly 2952 na 8_1_Jan_SF_Bin66_scaffold_290_c1 unplaced-scaffold na na JAOULD010000010.1 = NZ_JAOULD010000010.1 Primary Assembly 46434 na 8_1_Jan_SF_Bin66_scaffold_29429_c1 unplaced-scaffold na na JAOULD010000089.1 = NZ_JAOULD010000089.1 Primary Assembly 2885 na 8_1_Jan_SF_Bin66_scaffold_2944_c1 unplaced-scaffold na na JAOULD010000037.1 = NZ_JAOULD010000037.1 Primary Assembly 11510 na 8_1_Jan_SF_Bin66_scaffold_2971_c1 unplaced-scaffold na na JAOULD010000038.1 = NZ_JAOULD010000038.1 Primary Assembly 11444 na 8_1_Jan_SF_Bin66_scaffold_303_c1 unplaced-scaffold na na JAOULD010000011.1 = NZ_JAOULD010000011.1 Primary Assembly 45796 na 8_1_Jan_SF_Bin66_scaffold_30576_c1 unplaced-scaffold na na JAOULD010000090.1 = NZ_JAOULD010000090.1 Primary Assembly 2822 na 8_1_Jan_SF_Bin66_scaffold_30785_c1 unplaced-scaffold na na JAOULD010000091.1 = NZ_JAOULD010000091.1 Primary Assembly 2810 na 8_1_Jan_SF_Bin66_scaffold_308_c1 unplaced-scaffold na na JAOULD010000012.1 = NZ_JAOULD010000012.1 Primary Assembly 45244 na 8_1_Jan_SF_Bin66_scaffold_3168_c1 unplaced-scaffold na na JAOULD010000039.1 = NZ_JAOULD010000039.1 Primary Assembly 11036 na 8_1_Jan_SF_Bin66_scaffold_34702_c1 unplaced-scaffold na na JAOULD010000092.1 = NZ_JAOULD010000092.1 Primary Assembly 2618 na 8_1_Jan_SF_Bin66_scaffold_3538_c1 unplaced-scaffold na na JAOULD010000040.1 = NZ_JAOULD010000040.1 Primary Assembly 10357 na 8_1_Jan_SF_Bin66_scaffold_3713_c1 unplaced-scaffold na na JAOULD010000041.1 = NZ_JAOULD010000041.1 Primary Assembly 10100 na 8_1_Jan_SF_Bin66_scaffold_39094_c1 unplaced-scaffold na na JAOULD010000093.1 = NZ_JAOULD010000093.1 Primary Assembly 2441 na 8_1_Jan_SF_Bin66_scaffold_396_c1 unplaced-scaffold na na JAOULD010000014.1 = NZ_JAOULD010000014.1 Primary Assembly 39006 na 8_1_Jan_SF_Bin66_scaffold_3978_c1 unplaced-scaffold na na JAOULD010000042.1 = NZ_JAOULD010000042.1 Primary Assembly 9669 na 8_1_Jan_SF_Bin66_scaffold_42961_c1 unplaced-scaffold na na JAOULD010000094.1 = NZ_JAOULD010000094.1 Primary Assembly 2308 na 8_1_Jan_SF_Bin66_scaffold_4297_c1 unplaced-scaffold na na JAOULD010000043.1 = NZ_JAOULD010000043.1 Primary Assembly 9262 na 8_1_Jan_SF_Bin66_scaffold_45179_c1 unplaced-scaffold na na JAOULD010000095.1 = NZ_JAOULD010000095.1 Primary Assembly 2239 na 8_1_Jan_SF_Bin66_scaffold_4724_c1 unplaced-scaffold na na JAOULD010000044.1 = NZ_JAOULD010000044.1 Primary Assembly 8775 na 8_1_Jan_SF_Bin66_scaffold_4805_c1 unplaced-scaffold na na JAOULD010000045.1 = NZ_JAOULD010000045.1 Primary Assembly 8681 na 8_1_Jan_SF_Bin66_scaffold_48094_c1 unplaced-scaffold na na JAOULD010000096.1 = NZ_JAOULD010000096.1 Primary Assembly 2158 na 8_1_Jan_SF_Bin66_scaffold_4841_c1 unplaced-scaffold na na JAOULD010000046.1 = NZ_JAOULD010000046.1 Primary Assembly 8637 na 8_1_Jan_SF_Bin66_scaffold_487_c1 unplaced-scaffold na na JAOULD010000015.1 = NZ_JAOULD010000015.1 Primary Assembly 33818 na 8_1_Jan_SF_Bin66_scaffold_4922_c1 unplaced-scaffold na na JAOULD010000047.1 = NZ_JAOULD010000047.1 Primary Assembly 8551 na 8_1_Jan_SF_Bin66_scaffold_4955_c1 unplaced-scaffold na na JAOULD010000048.1 = NZ_JAOULD010000048.1 Primary Assembly 8513 na 8_1_Jan_SF_Bin66_scaffold_4984_c1 unplaced-scaffold na na JAOULD010000049.1 = NZ_JAOULD010000049.1 Primary Assembly 8491 na 8_1_Jan_SF_Bin66_scaffold_5008_c1 unplaced-scaffold na na JAOULD010000050.1 = NZ_JAOULD010000050.1 Primary Assembly 8466 na 8_1_Jan_SF_Bin66_scaffold_52519_c1 unplaced-scaffold na na JAOULD010000097.1 = NZ_JAOULD010000097.1 Primary Assembly 2050 na 8_1_Jan_SF_Bin66_scaffold_5563_c1 unplaced-scaffold na na JAOULD010000052.1 = NZ_JAOULD010000052.1 Primary Assembly 7955 na 8_1_Jan_SF_Bin66_scaffold_56_c1 unplaced-scaffold na na JAOULD010000001.1 = NZ_JAOULD010000001.1 Primary Assembly 120598 na 8_1_Jan_SF_Bin66_scaffold_57146_c1 unplaced-scaffold na na JAOULD010000098.1 = NZ_JAOULD010000098.1 Primary Assembly 1953 na 8_1_Jan_SF_Bin66_scaffold_5903_c1 unplaced-scaffold na na JAOULD010000053.1 = NZ_JAOULD010000053.1 Primary Assembly 7703 na 8_1_Jan_SF_Bin66_scaffold_6285_c1 unplaced-scaffold na na JAOULD010000054.1 = NZ_JAOULD010000054.1 Primary Assembly 7415 na 8_1_Jan_SF_Bin66_scaffold_6433_c1 unplaced-scaffold na na JAOULD010000055.1 = NZ_JAOULD010000055.1 Primary Assembly 7318 na 8_1_Jan_SF_Bin66_scaffold_67840_c1 unplaced-scaffold na na JAOULD010000099.1 = NZ_JAOULD010000099.1 Primary Assembly 1767 na 8_1_Jan_SF_Bin66_scaffold_688_c1 unplaced-scaffold na na JAOULD010000016.1 = NZ_JAOULD010000016.1 Primary Assembly 27010 na 8_1_Jan_SF_Bin66_scaffold_718_c1 unplaced-scaffold na na JAOULD010000017.1 = NZ_JAOULD010000017.1 Primary Assembly 26339 na 8_1_Jan_SF_Bin66_scaffold_72570_c1 unplaced-scaffold na na JAOULD010000100.1 = NZ_JAOULD010000100.1 Primary Assembly 1698 na 8_1_Jan_SF_Bin66_scaffold_7289_c1 unplaced-scaffold na na JAOULD010000056.1 = NZ_JAOULD010000056.1 Primary Assembly 6746 na 8_1_Jan_SF_Bin66_scaffold_7333_c1 unplaced-scaffold na na JAOULD010000057.1 = NZ_JAOULD010000057.1 Primary Assembly 6722 na 8_1_Jan_SF_Bin66_scaffold_7413_c1 unplaced-scaffold na na JAOULD010000058.1 = NZ_JAOULD010000058.1 Primary Assembly 6677 na 8_1_Jan_SF_Bin66_scaffold_7420_c1 unplaced-scaffold na na JAOULD010000059.1 = NZ_JAOULD010000059.1 Primary Assembly 6672 na 8_1_Jan_SF_Bin66_scaffold_77_c1 unplaced-scaffold na na JAOULD010000002.1 = NZ_JAOULD010000002.1 Primary Assembly 99318 na 8_1_Jan_SF_Bin66_scaffold_8077_c1 unplaced-scaffold na na JAOULD010000060.1 = NZ_JAOULD010000060.1 Primary Assembly 6327 na 8_1_Jan_SF_Bin66_scaffold_81414_c1 unplaced-scaffold na na JAOULD010000101.1 = NZ_JAOULD010000101.1 Primary Assembly 1585 na 8_1_Jan_SF_Bin66_scaffold_818_c1 unplaced-scaffold na na JAOULD010000025.1 = NZ_JAOULD010000025.1 Primary Assembly 16191 na 8_1_Jan_SF_Bin66_scaffold_818_c2 unplaced-scaffold na na JAOULD010000051.1 = NZ_JAOULD010000051.1 Primary Assembly 8151 na 8_1_Jan_SF_Bin66_scaffold_85343_c1 unplaced-scaffold na na JAOULD010000102.1 = NZ_JAOULD010000102.1 Primary Assembly 1541 na 8_1_Jan_SF_Bin66_scaffold_8795_c1 unplaced-scaffold na na JAOULD010000061.1 = NZ_JAOULD010000061.1 Primary Assembly 6025 na 8_1_Jan_SF_Bin66_scaffold_9207_c1 unplaced-scaffold na na JAOULD010000062.1 = NZ_JAOULD010000062.1 Primary Assembly 5854 na 8_1_Jan_SF_Bin66_scaffold_93_c1 unplaced-scaffold na na JAOULD010000003.1 = NZ_JAOULD010000003.1 Primary Assembly 88696 na 8_1_Jan_SF_Bin66_scaffold_9752_c1 unplaced-scaffold na na JAOULD010000063.1 = NZ_JAOULD010000063.1 Primary Assembly 5657 na