# Assembly name: ASM3018263v1 # Organism name: Amycolatopsis ponsaeliensis (high G+C Gram-positive bacteria) # Infraspecific name: strain=RTGN1 # Taxid: 2992142 # BioSample: SAMN31484191 # BioProject: PRJNA894975 # Submitter: Newcastle University # Date: 2023-06-06 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAPZLD01 # Assembly method: Shovill v. Galaxy Version 1.1.0+galaxy1 # Expected final version: no # Genome coverage: 134.0x # Sequencing technology: Illumina NovaSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_030182635.1 # RefSeq assembly accession: GCF_030182635.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_030182645.1 GCF_030182645.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig00001 unplaced-scaffold na na JAPZLD010000001.1 = NZ_JAPZLD010000001.1 Primary Assembly 624530 na contig00002 unplaced-scaffold na na JAPZLD010000002.1 = NZ_JAPZLD010000002.1 Primary Assembly 540624 na contig00003 unplaced-scaffold na na JAPZLD010000003.1 = NZ_JAPZLD010000003.1 Primary Assembly 415086 na contig00004 unplaced-scaffold na na JAPZLD010000004.1 = NZ_JAPZLD010000004.1 Primary Assembly 360202 na contig00005 unplaced-scaffold na na JAPZLD010000005.1 = NZ_JAPZLD010000005.1 Primary Assembly 327936 na contig00006 unplaced-scaffold na na JAPZLD010000006.1 = NZ_JAPZLD010000006.1 Primary Assembly 314256 na contig00007 unplaced-scaffold na na JAPZLD010000007.1 = NZ_JAPZLD010000007.1 Primary Assembly 307261 na contig00008 unplaced-scaffold na na JAPZLD010000008.1 = NZ_JAPZLD010000008.1 Primary Assembly 290119 na contig00009 unplaced-scaffold na na JAPZLD010000009.1 = NZ_JAPZLD010000009.1 Primary Assembly 287539 na contig00010 unplaced-scaffold na na JAPZLD010000010.1 = NZ_JAPZLD010000010.1 Primary Assembly 280080 na contig00011 unplaced-scaffold na na JAPZLD010000011.1 = NZ_JAPZLD010000011.1 Primary Assembly 262376 na contig00012 unplaced-scaffold na na JAPZLD010000012.1 = NZ_JAPZLD010000012.1 Primary Assembly 242809 na contig00013 unplaced-scaffold na na JAPZLD010000013.1 = NZ_JAPZLD010000013.1 Primary Assembly 240216 na contig00014 unplaced-scaffold na na JAPZLD010000014.1 = NZ_JAPZLD010000014.1 Primary Assembly 231781 na contig00015 unplaced-scaffold na na JAPZLD010000015.1 = NZ_JAPZLD010000015.1 Primary Assembly 220407 na contig00016 unplaced-scaffold na na JAPZLD010000016.1 = NZ_JAPZLD010000016.1 Primary Assembly 217229 na contig00017 unplaced-scaffold na na JAPZLD010000017.1 = NZ_JAPZLD010000017.1 Primary Assembly 208164 na contig00018 unplaced-scaffold na na JAPZLD010000018.1 = NZ_JAPZLD010000018.1 Primary Assembly 207999 na contig00019 unplaced-scaffold na na JAPZLD010000019.1 = NZ_JAPZLD010000019.1 Primary Assembly 202876 na contig00020 unplaced-scaffold na na JAPZLD010000020.1 = NZ_JAPZLD010000020.1 Primary Assembly 202142 na contig00021 unplaced-scaffold na na JAPZLD010000021.1 = NZ_JAPZLD010000021.1 Primary Assembly 179211 na contig00022 unplaced-scaffold na na JAPZLD010000022.1 = NZ_JAPZLD010000022.1 Primary Assembly 178014 na contig00023 unplaced-scaffold na na JAPZLD010000023.1 = NZ_JAPZLD010000023.1 Primary Assembly 173525 na contig00024 unplaced-scaffold na na JAPZLD010000024.1 = NZ_JAPZLD010000024.1 Primary Assembly 159541 na contig00025 unplaced-scaffold na na JAPZLD010000025.1 = NZ_JAPZLD010000025.1 Primary Assembly 158565 na contig00026 unplaced-scaffold na na JAPZLD010000026.1 = NZ_JAPZLD010000026.1 Primary Assembly 152450 na contig00027 unplaced-scaffold na na JAPZLD010000027.1 = NZ_JAPZLD010000027.1 Primary Assembly 151542 na contig00028 unplaced-scaffold na na JAPZLD010000028.1 = NZ_JAPZLD010000028.1 Primary Assembly 144413 na contig00029 unplaced-scaffold na na JAPZLD010000029.1 = NZ_JAPZLD010000029.1 Primary Assembly 144340 na contig00030 unplaced-scaffold na na JAPZLD010000030.1 = NZ_JAPZLD010000030.1 Primary Assembly 139316 na contig00031 unplaced-scaffold na na JAPZLD010000031.1 = NZ_JAPZLD010000031.1 Primary Assembly 139016 na contig00032 unplaced-scaffold na na JAPZLD010000032.1 = NZ_JAPZLD010000032.1 Primary Assembly 136318 na contig00033 unplaced-scaffold na na JAPZLD010000033.1 = NZ_JAPZLD010000033.1 Primary Assembly 134635 na contig00034 unplaced-scaffold na na JAPZLD010000034.1 = NZ_JAPZLD010000034.1 Primary Assembly 132280 na contig00035 unplaced-scaffold na na JAPZLD010000035.1 = NZ_JAPZLD010000035.1 Primary Assembly 130948 na contig00036 unplaced-scaffold na na JAPZLD010000036.1 = NZ_JAPZLD010000036.1 Primary Assembly 129042 na contig00037 unplaced-scaffold na na JAPZLD010000037.1 = NZ_JAPZLD010000037.1 Primary Assembly 123890 na contig00038 unplaced-scaffold na na JAPZLD010000038.1 = NZ_JAPZLD010000038.1 Primary Assembly 123365 na contig00039 unplaced-scaffold na na JAPZLD010000039.1 = NZ_JAPZLD010000039.1 Primary Assembly 114648 na contig00040 unplaced-scaffold na na JAPZLD010000040.1 = NZ_JAPZLD010000040.1 Primary Assembly 110228 na contig00041 unplaced-scaffold na na JAPZLD010000041.1 = NZ_JAPZLD010000041.1 Primary Assembly 109944 na contig00042 unplaced-scaffold na na JAPZLD010000042.1 = NZ_JAPZLD010000042.1 Primary Assembly 104778 na contig00043 unplaced-scaffold na na JAPZLD010000043.1 = NZ_JAPZLD010000043.1 Primary Assembly 96362 na contig00044 unplaced-scaffold na na JAPZLD010000044.1 = NZ_JAPZLD010000044.1 Primary Assembly 94652 na contig00045 unplaced-scaffold na na JAPZLD010000045.1 = NZ_JAPZLD010000045.1 Primary Assembly 88392 na contig00046 unplaced-scaffold na na JAPZLD010000046.1 = NZ_JAPZLD010000046.1 Primary Assembly 88127 na contig00047 unplaced-scaffold na na JAPZLD010000047.1 = NZ_JAPZLD010000047.1 Primary Assembly 87048 na contig00048 unplaced-scaffold na na JAPZLD010000048.1 = NZ_JAPZLD010000048.1 Primary Assembly 85707 na contig00049 unplaced-scaffold na na JAPZLD010000049.1 = NZ_JAPZLD010000049.1 Primary Assembly 84568 na contig00050 unplaced-scaffold na na JAPZLD010000050.1 = NZ_JAPZLD010000050.1 Primary Assembly 84421 na contig00051 unplaced-scaffold na na JAPZLD010000051.1 = NZ_JAPZLD010000051.1 Primary Assembly 82905 na contig00052 unplaced-scaffold na na JAPZLD010000052.1 = NZ_JAPZLD010000052.1 Primary Assembly 82466 na contig00053 unplaced-scaffold na na JAPZLD010000053.1 = NZ_JAPZLD010000053.1 Primary Assembly 81851 na contig00054 unplaced-scaffold na na JAPZLD010000054.1 = NZ_JAPZLD010000054.1 Primary Assembly 81047 na contig00055 unplaced-scaffold na na JAPZLD010000055.1 = NZ_JAPZLD010000055.1 Primary Assembly 77113 na contig00056 unplaced-scaffold na na JAPZLD010000056.1 = NZ_JAPZLD010000056.1 Primary Assembly 74523 na contig00057 unplaced-scaffold na na JAPZLD010000057.1 = NZ_JAPZLD010000057.1 Primary Assembly 73930 na contig00058 unplaced-scaffold na na JAPZLD010000058.1 = NZ_JAPZLD010000058.1 Primary Assembly 70730 na contig00059 unplaced-scaffold na na JAPZLD010000059.1 = NZ_JAPZLD010000059.1 Primary Assembly 65340 na contig00060 unplaced-scaffold na na JAPZLD010000060.1 = NZ_JAPZLD010000060.1 Primary Assembly 63327 na contig00061 unplaced-scaffold na na JAPZLD010000061.1 = NZ_JAPZLD010000061.1 Primary Assembly 62895 na contig00062 unplaced-scaffold na na JAPZLD010000062.1 = NZ_JAPZLD010000062.1 Primary Assembly 57389 na contig00063 unplaced-scaffold na na JAPZLD010000063.1 = NZ_JAPZLD010000063.1 Primary Assembly 54867 na contig00064 unplaced-scaffold na na JAPZLD010000064.1 = NZ_JAPZLD010000064.1 Primary Assembly 54853 na contig00065 unplaced-scaffold na na JAPZLD010000065.1 = NZ_JAPZLD010000065.1 Primary Assembly 52542 na contig00066 unplaced-scaffold na na JAPZLD010000066.1 = NZ_JAPZLD010000066.1 Primary Assembly 50986 na contig00067 unplaced-scaffold na na JAPZLD010000067.1 = NZ_JAPZLD010000067.1 Primary Assembly 47886 na contig00068 unplaced-scaffold na na JAPZLD010000068.1 = NZ_JAPZLD010000068.1 Primary Assembly 45644 na contig00069 unplaced-scaffold na na JAPZLD010000069.1 = NZ_JAPZLD010000069.1 Primary Assembly 45374 na contig00070 unplaced-scaffold na na JAPZLD010000070.1 = NZ_JAPZLD010000070.1 Primary Assembly 44998 na contig00071 unplaced-scaffold na na JAPZLD010000071.1 = NZ_JAPZLD010000071.1 Primary Assembly 42308 na contig00072 unplaced-scaffold na na JAPZLD010000072.1 = NZ_JAPZLD010000072.1 Primary Assembly 41661 na contig00073 unplaced-scaffold na na JAPZLD010000073.1 = NZ_JAPZLD010000073.1 Primary Assembly 39163 na contig00074 unplaced-scaffold na na JAPZLD010000074.1 = NZ_JAPZLD010000074.1 Primary Assembly 34701 na contig00075 unplaced-scaffold na na JAPZLD010000075.1 = NZ_JAPZLD010000075.1 Primary Assembly 34322 na contig00076 unplaced-scaffold na na JAPZLD010000076.1 = NZ_JAPZLD010000076.1 Primary Assembly 34234 na contig00077 unplaced-scaffold na na JAPZLD010000077.1 = NZ_JAPZLD010000077.1 Primary Assembly 33821 na contig00078 unplaced-scaffold na na JAPZLD010000078.1 = NZ_JAPZLD010000078.1 Primary Assembly 32962 na contig00079 unplaced-scaffold na na JAPZLD010000079.1 = NZ_JAPZLD010000079.1 Primary Assembly 31840 na contig00080 unplaced-scaffold na na JAPZLD010000080.1 = NZ_JAPZLD010000080.1 Primary Assembly 31638 na contig00081 unplaced-scaffold na na JAPZLD010000081.1 = NZ_JAPZLD010000081.1 Primary Assembly 31342 na contig00082 unplaced-scaffold na na JAPZLD010000082.1 = NZ_JAPZLD010000082.1 Primary Assembly 30699 na contig00083 unplaced-scaffold na na JAPZLD010000083.1 = NZ_JAPZLD010000083.1 Primary Assembly 28837 na contig00084 unplaced-scaffold na na JAPZLD010000084.1 = NZ_JAPZLD010000084.1 Primary Assembly 27932 na contig00085 unplaced-scaffold na na JAPZLD010000085.1 = NZ_JAPZLD010000085.1 Primary Assembly 27666 na contig00086 unplaced-scaffold na na JAPZLD010000086.1 = NZ_JAPZLD010000086.1 Primary Assembly 27481 na contig00087 unplaced-scaffold na na JAPZLD010000087.1 = NZ_JAPZLD010000087.1 Primary Assembly 26778 na contig00088 unplaced-scaffold na na JAPZLD010000088.1 = NZ_JAPZLD010000088.1 Primary Assembly 26739 na contig00089 unplaced-scaffold na na JAPZLD010000089.1 = NZ_JAPZLD010000089.1 Primary Assembly 24367 na contig00090 unplaced-scaffold na na JAPZLD010000090.1 = NZ_JAPZLD010000090.1 Primary Assembly 24167 na contig00091 unplaced-scaffold na na JAPZLD010000091.1 = NZ_JAPZLD010000091.1 Primary Assembly 23749 na contig00092 unplaced-scaffold na na JAPZLD010000092.1 = NZ_JAPZLD010000092.1 Primary Assembly 23677 na contig00093 unplaced-scaffold na na JAPZLD010000093.1 = NZ_JAPZLD010000093.1 Primary Assembly 21908 na contig00094 unplaced-scaffold na na JAPZLD010000094.1 = NZ_JAPZLD010000094.1 Primary Assembly 20396 na contig00095 unplaced-scaffold na na JAPZLD010000095.1 = NZ_JAPZLD010000095.1 Primary Assembly 18538 na contig00096 unplaced-scaffold na na JAPZLD010000096.1 = NZ_JAPZLD010000096.1 Primary Assembly 17806 na contig00097 unplaced-scaffold na na JAPZLD010000097.1 = NZ_JAPZLD010000097.1 Primary Assembly 17675 na contig00098 unplaced-scaffold na na JAPZLD010000098.1 = NZ_JAPZLD010000098.1 Primary Assembly 17590 na contig00099 unplaced-scaffold na na JAPZLD010000099.1 = NZ_JAPZLD010000099.1 Primary Assembly 16837 na contig00100 unplaced-scaffold na na JAPZLD010000100.1 = NZ_JAPZLD010000100.1 Primary Assembly 16142 na contig00101 unplaced-scaffold na na JAPZLD010000101.1 = NZ_JAPZLD010000101.1 Primary Assembly 14749 na contig00102 unplaced-scaffold na na JAPZLD010000102.1 = NZ_JAPZLD010000102.1 Primary Assembly 14249 na contig00103 unplaced-scaffold na na JAPZLD010000103.1 = NZ_JAPZLD010000103.1 Primary Assembly 14122 na contig00104 unplaced-scaffold na na JAPZLD010000104.1 = NZ_JAPZLD010000104.1 Primary Assembly 11363 na contig00105 unplaced-scaffold na na JAPZLD010000105.1 = NZ_JAPZLD010000105.1 Primary Assembly 10211 na contig00106 unplaced-scaffold na na JAPZLD010000106.1 = NZ_JAPZLD010000106.1 Primary Assembly 7785 na contig00107 unplaced-scaffold na na JAPZLD010000107.1 = NZ_JAPZLD010000107.1 Primary Assembly 7509 na contig00108 unplaced-scaffold na na JAPZLD010000108.1 = NZ_JAPZLD010000108.1 Primary Assembly 7350 na contig00109 unplaced-scaffold na na JAPZLD010000109.1 = NZ_JAPZLD010000109.1 Primary Assembly 5845 na contig00110 unplaced-scaffold na na JAPZLD010000110.1 = NZ_JAPZLD010000110.1 Primary Assembly 5232 na contig00111 unplaced-scaffold na na JAPZLD010000111.1 = NZ_JAPZLD010000111.1 Primary Assembly 4313 na contig00112 unplaced-scaffold na na JAPZLD010000112.1 = NZ_JAPZLD010000112.1 Primary Assembly 4156 na contig00113 unplaced-scaffold na na JAPZLD010000113.1 = NZ_JAPZLD010000113.1 Primary Assembly 2797 na contig00114 unplaced-scaffold na na JAPZLD010000114.1 = NZ_JAPZLD010000114.1 Primary Assembly 1582 na contig00115 unplaced-scaffold na na JAPZLD010000115.1 = NZ_JAPZLD010000115.1 Primary Assembly 1509 na contig00116 unplaced-scaffold na na JAPZLD010000116.1 = NZ_JAPZLD010000116.1 Primary Assembly 1409 na contig00117 unplaced-scaffold na na JAPZLD010000117.1 = NZ_JAPZLD010000117.1 Primary Assembly 1337 na contig00118 unplaced-scaffold na na JAPZLD010000118.1 = NZ_JAPZLD010000118.1 Primary Assembly 1319 na contig00119 unplaced-scaffold na na JAPZLD010000119.1 = NZ_JAPZLD010000119.1 Primary Assembly 1218 na contig00120 unplaced-scaffold na na JAPZLD010000120.1 = NZ_JAPZLD010000120.1 Primary Assembly 886 na contig00121 unplaced-scaffold na na JAPZLD010000121.1 = NZ_JAPZLD010000121.1 Primary Assembly 800 na contig00122 unplaced-scaffold na na JAPZLD010000122.1 = NZ_JAPZLD010000122.1 Primary Assembly 711 na contig00123 unplaced-scaffold na na JAPZLD010000123.1 = NZ_JAPZLD010000123.1 Primary Assembly 687 na contig00124 unplaced-scaffold na na JAPZLD010000124.1 = NZ_JAPZLD010000124.1 Primary Assembly 678 na contig00125 unplaced-scaffold na na JAPZLD010000125.1 = NZ_JAPZLD010000125.1 Primary Assembly 599 na contig00126 unplaced-scaffold na na JAPZLD010000126.1 = NZ_JAPZLD010000126.1 Primary Assembly 578 na contig00127 unplaced-scaffold na na JAPZLD010000127.1 = NZ_JAPZLD010000127.1 Primary Assembly 545 na contig00128 unplaced-scaffold na na JAPZLD010000128.1 = NZ_JAPZLD010000128.1 Primary Assembly 520 na contig00129 unplaced-scaffold na na JAPZLD010000129.1 = NZ_JAPZLD010000129.1 Primary Assembly 500 na contig00130 unplaced-scaffold na na JAPZLD010000130.1 = NZ_JAPZLD010000130.1 Primary Assembly 471 na contig00131 unplaced-scaffold na na JAPZLD010000131.1 = NZ_JAPZLD010000131.1 Primary Assembly 418 na contig00132 unplaced-scaffold na na JAPZLD010000132.1 = NZ_JAPZLD010000132.1 Primary Assembly 393 na contig00133 unplaced-scaffold na na JAPZLD010000133.1 = NZ_JAPZLD010000133.1 Primary Assembly 379 na contig00134 unplaced-scaffold na na JAPZLD010000134.1 = NZ_JAPZLD010000134.1 Primary Assembly 372 na contig00135 unplaced-scaffold na na JAPZLD010000135.1 = NZ_JAPZLD010000135.1 Primary Assembly 230 na contig00136 unplaced-scaffold na na JAPZLD010000136.1 = NZ_JAPZLD010000136.1 Primary Assembly 230 na contig00137 unplaced-scaffold na na JAPZLD010000137.1 = NZ_JAPZLD010000137.1 Primary Assembly 225 na contig00138 unplaced-scaffold na na JAPZLD010000138.1 = NZ_JAPZLD010000138.1 Primary Assembly 225 na contig00139 unplaced-scaffold na na JAPZLD010000139.1 = NZ_JAPZLD010000139.1 Primary Assembly 223 na contig00140 unplaced-scaffold na na JAPZLD010000140.1 = NZ_JAPZLD010000140.1 Primary Assembly 223 na contig00141 unplaced-scaffold na na JAPZLD010000141.1 = NZ_JAPZLD010000141.1 Primary Assembly 223 na contig00142 unplaced-scaffold na na JAPZLD010000142.1 = NZ_JAPZLD010000142.1 Primary Assembly 223 na contig00143 unplaced-scaffold na na JAPZLD010000143.1 = NZ_JAPZLD010000143.1 Primary Assembly 223 na contig00144 unplaced-scaffold na na JAPZLD010000144.1 = NZ_JAPZLD010000144.1 Primary Assembly 218 na contig00145 unplaced-scaffold na na JAPZLD010000145.1 = NZ_JAPZLD010000145.1 Primary Assembly 217 na contig00146 unplaced-scaffold na na JAPZLD010000146.1 = NZ_JAPZLD010000146.1 Primary Assembly 205 na contig00147 unplaced-scaffold na na JAPZLD010000147.1 = NZ_JAPZLD010000147.1 Primary Assembly 202 na