# Assembly name: RoL_Dexc_1.0 # Organism name: Doryrhamphus excisus (bluestripe pipefish) # Isolate: RoL2022-K1 # Sex: male # Taxid: 161450 # BioSample: SAMN31865074 # BioProject: PRJNA851781 # Submitter: University of Idaho at Moscow # Date: 2023-06-30 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JASTKU01 # Assembly method: Hifiasm v. 0.16.1 # Expected final version: no # Genome coverage: 60.0x # Sequencing technology: Pacbio HiFi; Phase Genomics Hi-C # RefSeq category: Representative Genome # GenBank assembly accession: GCA_030265055.1 # RefSeq assembly accession: GCF_030265055.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_030265135.1 GCF_030265135.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HiC_scaffold_1 assembled-molecule 1 Chromosome CM059392.1 = NC_080466.1 Primary Assembly 44680574 na HiC_scaffold_2 assembled-molecule 2 Chromosome CM059393.1 = NC_080467.1 Primary Assembly 31654132 na HiC_scaffold_3 assembled-molecule 3 Chromosome CM059394.1 = NC_080468.1 Primary Assembly 31149336 na HiC_scaffold_4 assembled-molecule 4 Chromosome CM059395.1 = NC_080469.1 Primary Assembly 27912432 na HiC_scaffold_5 assembled-molecule 5 Chromosome CM059396.1 = NC_080470.1 Primary Assembly 27238265 na HiC_scaffold_6 assembled-molecule 6 Chromosome CM059397.1 = NC_080471.1 Primary Assembly 23975129 na HiC_scaffold_7 assembled-molecule 7 Chromosome CM059398.1 = NC_080472.1 Primary Assembly 23457444 na HiC_scaffold_8 assembled-molecule 8 Chromosome CM059399.1 = NC_080473.1 Primary Assembly 22300828 na HiC_scaffold_9 assembled-molecule 9 Chromosome CM059400.1 = NC_080474.1 Primary Assembly 21938896 na HiC_scaffold_10 assembled-molecule 10 Chromosome CM059401.1 = NC_080475.1 Primary Assembly 21699758 na HiC_scaffold_11 assembled-molecule 11 Chromosome CM059402.1 = NC_080476.1 Primary Assembly 21451023 na HiC_scaffold_12 assembled-molecule 12 Chromosome CM059403.1 = NC_080477.1 Primary Assembly 21240526 na HiC_scaffold_13 assembled-molecule 13 Chromosome CM059404.1 = NC_080478.1 Primary Assembly 21018769 na HiC_scaffold_14 assembled-molecule 14 Chromosome CM059405.1 = NC_080479.1 Primary Assembly 20768860 na HiC_scaffold_15 assembled-molecule 15 Chromosome CM059406.1 = NC_080480.1 Primary Assembly 18917680 na HiC_scaffold_16 assembled-molecule 16 Chromosome CM059407.1 = NC_080481.1 Primary Assembly 18835985 na HiC_scaffold_17 assembled-molecule 17 Chromosome CM059408.1 = NC_080482.1 Primary Assembly 18716319 na HiC_scaffold_18 assembled-molecule 18 Chromosome CM059409.1 = NC_080483.1 Primary Assembly 17950175 na HiC_scaffold_19 assembled-molecule 19 Chromosome CM059410.1 = NC_080484.1 Primary Assembly 17241690 na HiC_scaffold_20 assembled-molecule 20 Chromosome CM059411.1 = NC_080485.1 Primary Assembly 16832447 na HiC_scaffold_21 assembled-molecule 21 Chromosome CM059412.1 = NC_080486.1 Primary Assembly 15358873 na HiC_scaffold_22 assembled-molecule 22 Chromosome CM059413.1 = NC_080487.1 Primary Assembly 14517769 na HiC_scaffold_23 assembled-molecule 23 Chromosome CM059414.1 = NC_080488.1 Primary Assembly 12986849 na HiC_scaffold_24 unplaced-scaffold na na JASTKU010000024.1 = NW_026652242.1 Primary Assembly 2241397 na HiC_scaffold_25 unplaced-scaffold na na JASTKU010000025.1 = NW_026652243.1 Primary Assembly 1930655 na HiC_scaffold_26 unplaced-scaffold na na JASTKU010000026.1 = NW_026652244.1 Primary Assembly 1324910 na HiC_scaffold_27 unplaced-scaffold na na JASTKU010000027.1 = NW_026652245.1 Primary Assembly 510068 na HiC_scaffold_28 unplaced-scaffold na na JASTKU010000028.1 = NW_026652246.1 Primary Assembly 300238 na HiC_scaffold_32 unplaced-scaffold na na JASTKU010000029.1 = NW_026652247.1 Primary Assembly 150307 na HiC_scaffold_33 unplaced-scaffold na na JASTKU010000030.1 = NW_026652248.1 Primary Assembly 120492 na HiC_scaffold_34 unplaced-scaffold na na JASTKU010000031.1 = NW_026652249.1 Primary Assembly 99593 na HiC_scaffold_36 unplaced-scaffold na na JASTKU010000032.1 = NW_026652250.1 Primary Assembly 74761 na HiC_scaffold_37 unplaced-scaffold na na JASTKU010000033.1 = NW_026652251.1 Primary Assembly 63400 na HiC_scaffold_38 unplaced-scaffold na na JASTKU010000034.1 = NW_026652252.1 Primary Assembly 62497 na HiC_scaffold_39 unplaced-scaffold na na JASTKU010000035.1 = NW_026652253.1 Primary Assembly 53884 na HiC_scaffold_40 unplaced-scaffold na na JASTKU010000036.1 = NW_026652254.1 Primary Assembly 48632 na HiC_scaffold_41 unplaced-scaffold na na JASTKU010000037.1 = NW_026652255.1 Primary Assembly 44437 na HiC_scaffold_43 unplaced-scaffold na na JASTKU010000038.1 = NW_026652256.1 Primary Assembly 36939 na HiC_scaffold_44 unplaced-scaffold na na JASTKU010000039.1 = NW_026652257.1 Primary Assembly 33267 na HiC_scaffold_45 unplaced-scaffold na na JASTKU010000040.1 = NW_026652258.1 Primary Assembly 31286 na HiC_scaffold_46 unplaced-scaffold na na JASTKU010000041.1 = NW_026652259.1 Primary Assembly 28905 na HiC_scaffold_47 unplaced-scaffold na na JASTKU010000042.1 = NW_026652260.1 Primary Assembly 28744 na HiC_scaffold_48 unplaced-scaffold na na JASTKU010000043.1 = NW_026652261.1 Primary Assembly 28714 na HiC_scaffold_49 unplaced-scaffold na na JASTKU010000044.1 = NW_026652262.1 Primary Assembly 28278 na HiC_scaffold_50 unplaced-scaffold na na JASTKU010000045.1 = NW_026652263.1 Primary Assembly 27304 na HiC_scaffold_51 unplaced-scaffold na na JASTKU010000046.1 = NW_026652264.1 Primary Assembly 26251 na HiC_scaffold_52 unplaced-scaffold na na JASTKU010000047.1 = NW_026652265.1 Primary Assembly 25813 na HiC_scaffold_53 unplaced-scaffold na na JASTKU010000048.1 = NW_026652266.1 Primary Assembly 25700 na HiC_scaffold_55 unplaced-scaffold na na JASTKU010000049.1 = NW_026652267.1 Primary Assembly 24567 na HiC_scaffold_57 unplaced-scaffold na na JASTKU010000050.1 = NW_026652268.1 Primary Assembly 23745 na HiC_scaffold_58 unplaced-scaffold na na JASTKU010000051.1 = NW_026652269.1 Primary Assembly 22955 na HiC_scaffold_60 unplaced-scaffold na na JASTKU010000052.1 = NW_026652270.1 Primary Assembly 21971 na HiC_scaffold_62 unplaced-scaffold na na JASTKU010000053.1 = NW_026652271.1 Primary Assembly 21163 na HiC_scaffold_63 unplaced-scaffold na na JASTKU010000054.1 = NW_026652272.1 Primary Assembly 20172 na HiC_scaffold_64 unplaced-scaffold na na JASTKU010000055.1 = NW_026652273.1 Primary Assembly 19064 na HiC_scaffold_65 unplaced-scaffold na na JASTKU010000056.1 = NW_026652274.1 Primary Assembly 18788 na HiC_scaffold_67 unplaced-scaffold na na JASTKU010000057.1 = NW_026652275.1 Primary Assembly 15620 na