# Assembly name: ASM3134407v1 # Organism name: Clostridium aquiflavi (firmicutes) # Infraspecific name: strain=5 N-1 # Taxid: 3073603 # BioSample: SAMN37261136 # BioProject: PRJNA1012502 # Submitter: China National Research Institute of Food and Fermentation Industries Co., Ltd # Date: 2023-09-11 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAVJAN01 # Assembly method: SPAdes v. 3.11.0 # Expected final version: no # Genome coverage: 101.93x # Sequencing technology: BGI MGISEQ-200 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_031344075.1 # RefSeq assembly accession: GCF_031344075.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_031344085.1 GCF_031344085.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffolds_1_142751 unplaced-scaffold na na JAVJAN010000001.1 = NZ_JAVJAN010000001.1 Primary Assembly 142751 na Scaffolds_2_132951 unplaced-scaffold na na JAVJAN010000002.1 = NZ_JAVJAN010000002.1 Primary Assembly 132951 na Scaffolds_3_125713 unplaced-scaffold na na JAVJAN010000003.1 = NZ_JAVJAN010000003.1 Primary Assembly 125713 na Scaffolds_4_120518 unplaced-scaffold na na JAVJAN010000004.1 = NZ_JAVJAN010000004.1 Primary Assembly 120518 na Scaffolds_5_111676 unplaced-scaffold na na JAVJAN010000005.1 = NZ_JAVJAN010000005.1 Primary Assembly 111676 na Scaffolds_6_100191 unplaced-scaffold na na JAVJAN010000006.1 = NZ_JAVJAN010000006.1 Primary Assembly 100191 na Scaffolds_7_98056 unplaced-scaffold na na JAVJAN010000007.1 = NZ_JAVJAN010000007.1 Primary Assembly 98056 na Scaffolds_8_97990 unplaced-scaffold na na JAVJAN010000008.1 = NZ_JAVJAN010000008.1 Primary Assembly 97990 na Scaffolds_9_97320 unplaced-scaffold na na JAVJAN010000009.1 = NZ_JAVJAN010000009.1 Primary Assembly 97320 na Scaffolds_10_96447 unplaced-scaffold na na JAVJAN010000010.1 = NZ_JAVJAN010000010.1 Primary Assembly 96447 na Scaffolds_11_95332 unplaced-scaffold na na JAVJAN010000011.1 = NZ_JAVJAN010000011.1 Primary Assembly 95332 na Scaffolds_12_92510 unplaced-scaffold na na JAVJAN010000012.1 = NZ_JAVJAN010000012.1 Primary Assembly 92510 na Scaffolds_13_91021 unplaced-scaffold na na JAVJAN010000013.1 = NZ_JAVJAN010000013.1 Primary Assembly 91021 na Scaffolds_14_86165 unplaced-scaffold na na JAVJAN010000014.1 = NZ_JAVJAN010000014.1 Primary Assembly 86165 na Scaffolds_15_79791 unplaced-scaffold na na JAVJAN010000015.1 = NZ_JAVJAN010000015.1 Primary Assembly 79791 na Scaffolds_16_75759 unplaced-scaffold na na JAVJAN010000016.1 = NZ_JAVJAN010000016.1 Primary Assembly 75759 na Scaffolds_17_74279 unplaced-scaffold na na JAVJAN010000017.1 = NZ_JAVJAN010000017.1 Primary Assembly 74279 na Scaffolds_18_71711 unplaced-scaffold na na JAVJAN010000018.1 = NZ_JAVJAN010000018.1 Primary Assembly 71711 na Scaffolds_19_68635 unplaced-scaffold na na JAVJAN010000019.1 = NZ_JAVJAN010000019.1 Primary Assembly 68635 na Scaffolds_20_67933 unplaced-scaffold na na JAVJAN010000020.1 = NZ_JAVJAN010000020.1 Primary Assembly 67933 na Scaffolds_21_67588 unplaced-scaffold na na JAVJAN010000021.1 = NZ_JAVJAN010000021.1 Primary Assembly 67588 na Scaffolds_22_67201 unplaced-scaffold na na JAVJAN010000022.1 = NZ_JAVJAN010000022.1 Primary Assembly 67201 na Scaffolds_23_67137 unplaced-scaffold na na JAVJAN010000023.1 = NZ_JAVJAN010000023.1 Primary Assembly 67137 na Scaffolds_24_67088 unplaced-scaffold na na JAVJAN010000024.1 = NZ_JAVJAN010000024.1 Primary Assembly 67088 na Scaffolds_25_64134 unplaced-scaffold na na JAVJAN010000025.1 = NZ_JAVJAN010000025.1 Primary Assembly 64134 na Scaffolds_26_62957 unplaced-scaffold na na JAVJAN010000026.1 = NZ_JAVJAN010000026.1 Primary Assembly 62957 na Scaffolds_27_55632 unplaced-scaffold na na JAVJAN010000027.1 = NZ_JAVJAN010000027.1 Primary Assembly 55632 na Scaffolds_28_55121 unplaced-scaffold na na JAVJAN010000028.1 = NZ_JAVJAN010000028.1 Primary Assembly 55121 na Scaffolds_29_55064 unplaced-scaffold na na JAVJAN010000029.1 = NZ_JAVJAN010000029.1 Primary Assembly 55064 na Scaffolds_30_49211 unplaced-scaffold na na JAVJAN010000030.1 = NZ_JAVJAN010000030.1 Primary Assembly 49211 na Scaffolds_31_48050 unplaced-scaffold na na JAVJAN010000031.1 = NZ_JAVJAN010000031.1 Primary Assembly 48050 na Scaffolds_32_47475 unplaced-scaffold na na JAVJAN010000032.1 = NZ_JAVJAN010000032.1 Primary Assembly 47475 na Scaffolds_33_45663 unplaced-scaffold na na JAVJAN010000033.1 = NZ_JAVJAN010000033.1 Primary Assembly 45663 na Scaffolds_34_43606 unplaced-scaffold na na JAVJAN010000034.1 = NZ_JAVJAN010000034.1 Primary Assembly 43606 na Scaffolds_35_42062 unplaced-scaffold na na JAVJAN010000035.1 = NZ_JAVJAN010000035.1 Primary Assembly 42062 na Scaffolds_36_40165 unplaced-scaffold na na JAVJAN010000036.1 = NZ_JAVJAN010000036.1 Primary Assembly 40165 na Scaffolds_37_38194 unplaced-scaffold na na JAVJAN010000037.1 = NZ_JAVJAN010000037.1 Primary Assembly 38194 na Scaffolds_38_34746 unplaced-scaffold na na JAVJAN010000038.1 = NZ_JAVJAN010000038.1 Primary Assembly 34746 na Scaffolds_39_32894 unplaced-scaffold na na JAVJAN010000039.1 = NZ_JAVJAN010000039.1 Primary Assembly 32894 na Scaffolds_40_31737 unplaced-scaffold na na JAVJAN010000040.1 = NZ_JAVJAN010000040.1 Primary Assembly 31737 na Scaffolds_41_28201 unplaced-scaffold na na JAVJAN010000041.1 = NZ_JAVJAN010000041.1 Primary Assembly 28201 na Scaffolds_42_27898 unplaced-scaffold na na JAVJAN010000042.1 = NZ_JAVJAN010000042.1 Primary Assembly 27898 na Scaffolds_43_26208 unplaced-scaffold na na JAVJAN010000043.1 = NZ_JAVJAN010000043.1 Primary Assembly 26208 na Scaffolds_44_26111 unplaced-scaffold na na JAVJAN010000044.1 = NZ_JAVJAN010000044.1 Primary Assembly 26111 na Scaffolds_45_25601 unplaced-scaffold na na JAVJAN010000045.1 = NZ_JAVJAN010000045.1 Primary Assembly 25601 na Scaffolds_46_20322 unplaced-scaffold na na JAVJAN010000046.1 = NZ_JAVJAN010000046.1 Primary Assembly 20322 na Scaffolds_47_20253 unplaced-scaffold na na JAVJAN010000047.1 = NZ_JAVJAN010000047.1 Primary Assembly 20253 na Scaffolds_48_19416 unplaced-scaffold na na JAVJAN010000048.1 = NZ_JAVJAN010000048.1 Primary Assembly 19416 na Scaffolds_49_19344 unplaced-scaffold na na JAVJAN010000049.1 = NZ_JAVJAN010000049.1 Primary Assembly 19344 na Scaffolds_50_18386 unplaced-scaffold na na JAVJAN010000050.1 = NZ_JAVJAN010000050.1 Primary Assembly 18386 na Scaffolds_51_18167 unplaced-scaffold na na JAVJAN010000051.1 = NZ_JAVJAN010000051.1 Primary Assembly 18167 na Scaffolds_52_17747 unplaced-scaffold na na JAVJAN010000052.1 = NZ_JAVJAN010000052.1 Primary Assembly 17747 na Scaffolds_53_15819 unplaced-scaffold na na JAVJAN010000053.1 = NZ_JAVJAN010000053.1 Primary Assembly 15819 na Scaffolds_54_14821 unplaced-scaffold na na JAVJAN010000054.1 = NZ_JAVJAN010000054.1 Primary Assembly 14821 na Scaffolds_55_14390 unplaced-scaffold na na JAVJAN010000055.1 = NZ_JAVJAN010000055.1 Primary Assembly 14390 na Scaffolds_56_14031 unplaced-scaffold na na JAVJAN010000056.1 = NZ_JAVJAN010000056.1 Primary Assembly 14031 na Scaffolds_57_13999 unplaced-scaffold na na JAVJAN010000057.1 = NZ_JAVJAN010000057.1 Primary Assembly 13999 na Scaffolds_58_13048 unplaced-scaffold na na JAVJAN010000058.1 = NZ_JAVJAN010000058.1 Primary Assembly 13048 na Scaffolds_59_12273 unplaced-scaffold na na JAVJAN010000059.1 = NZ_JAVJAN010000059.1 Primary Assembly 12273 na Scaffolds_60_11667 unplaced-scaffold na na JAVJAN010000060.1 = NZ_JAVJAN010000060.1 Primary Assembly 11667 na Scaffolds_61_11614 unplaced-scaffold na na JAVJAN010000061.1 = NZ_JAVJAN010000061.1 Primary Assembly 11614 na Scaffolds_62_10987 unplaced-scaffold na na JAVJAN010000062.1 = NZ_JAVJAN010000062.1 Primary Assembly 10987 na Scaffolds_63_9816 unplaced-scaffold na na JAVJAN010000063.1 = NZ_JAVJAN010000063.1 Primary Assembly 9816 na Scaffolds_64_9637 unplaced-scaffold na na JAVJAN010000064.1 = NZ_JAVJAN010000064.1 Primary Assembly 9637 na Scaffolds_65_9333 unplaced-scaffold na na JAVJAN010000065.1 = NZ_JAVJAN010000065.1 Primary Assembly 9333 na Scaffolds_66_9145 unplaced-scaffold na na JAVJAN010000066.1 = NZ_JAVJAN010000066.1 Primary Assembly 9145 na Scaffolds_67_8883 unplaced-scaffold na na JAVJAN010000067.1 = NZ_JAVJAN010000067.1 Primary Assembly 8883 na Scaffolds_68_8566 unplaced-scaffold na na JAVJAN010000068.1 = NZ_JAVJAN010000068.1 Primary Assembly 8566 na Scaffolds_69_8250 unplaced-scaffold na na JAVJAN010000069.1 = NZ_JAVJAN010000069.1 Primary Assembly 8250 na Scaffolds_70_8099 unplaced-scaffold na na JAVJAN010000070.1 = NZ_JAVJAN010000070.1 Primary Assembly 8099 na Scaffolds_71_7938 unplaced-scaffold na na JAVJAN010000071.1 = NZ_JAVJAN010000071.1 Primary Assembly 7938 na Scaffolds_72_7838 unplaced-scaffold na na JAVJAN010000072.1 = NZ_JAVJAN010000072.1 Primary Assembly 7838 na Scaffolds_73_7792 unplaced-scaffold na na JAVJAN010000073.1 = NZ_JAVJAN010000073.1 Primary Assembly 7792 na Scaffolds_74_6407 unplaced-scaffold na na JAVJAN010000074.1 = NZ_JAVJAN010000074.1 Primary Assembly 6407 na Scaffolds_75_6317 unplaced-scaffold na na JAVJAN010000075.1 = NZ_JAVJAN010000075.1 Primary Assembly 6317 na Scaffolds_76_5954 unplaced-scaffold na na JAVJAN010000076.1 = NZ_JAVJAN010000076.1 Primary Assembly 5954 na Scaffolds_77_5188 unplaced-scaffold na na JAVJAN010000077.1 = NZ_JAVJAN010000077.1 Primary Assembly 5188 na Scaffolds_78_5141 unplaced-scaffold na na JAVJAN010000078.1 = NZ_JAVJAN010000078.1 Primary Assembly 5141 na Scaffolds_79_5004 unplaced-scaffold na na JAVJAN010000079.1 = NZ_JAVJAN010000079.1 Primary Assembly 5004 na Scaffolds_80_4677 unplaced-scaffold na na JAVJAN010000080.1 = NZ_JAVJAN010000080.1 Primary Assembly 4677 na Scaffolds_81_4440 unplaced-scaffold na na JAVJAN010000081.1 = NZ_JAVJAN010000081.1 Primary Assembly 4440 na Scaffolds_82_3978 unplaced-scaffold na na JAVJAN010000082.1 = NZ_JAVJAN010000082.1 Primary Assembly 3978 na Scaffolds_83_3803 unplaced-scaffold na na JAVJAN010000083.1 = NZ_JAVJAN010000083.1 Primary Assembly 3803 na Scaffolds_84_3490 unplaced-scaffold na na JAVJAN010000084.1 = NZ_JAVJAN010000084.1 Primary Assembly 3490 na Scaffolds_85_3410 unplaced-scaffold na na JAVJAN010000085.1 = NZ_JAVJAN010000085.1 Primary Assembly 3410 na Scaffolds_86_2927 unplaced-scaffold na na JAVJAN010000086.1 = NZ_JAVJAN010000086.1 Primary Assembly 2927 na Scaffolds_87_2796 unplaced-scaffold na na JAVJAN010000087.1 = NZ_JAVJAN010000087.1 Primary Assembly 2796 na Scaffolds_88_2777 unplaced-scaffold na na JAVJAN010000088.1 = NZ_JAVJAN010000088.1 Primary Assembly 2777 na Scaffolds_89_2703 unplaced-scaffold na na JAVJAN010000089.1 = NZ_JAVJAN010000089.1 Primary Assembly 2703 na Scaffolds_90_2589 unplaced-scaffold na na JAVJAN010000090.1 = NZ_JAVJAN010000090.1 Primary Assembly 2589 na Scaffolds_91_2237 unplaced-scaffold na na JAVJAN010000091.1 = NZ_JAVJAN010000091.1 Primary Assembly 2237 na Scaffolds_92_2035 unplaced-scaffold na na JAVJAN010000092.1 = NZ_JAVJAN010000092.1 Primary Assembly 2035 na Scaffolds_93_1782 unplaced-scaffold na na JAVJAN010000093.1 = NZ_JAVJAN010000093.1 Primary Assembly 1782 na Scaffolds_94_1658 unplaced-scaffold na na JAVJAN010000094.1 = NZ_JAVJAN010000094.1 Primary Assembly 1658 na Scaffolds_95_1461 unplaced-scaffold na na JAVJAN010000095.1 = NZ_JAVJAN010000095.1 Primary Assembly 1461 na Scaffolds_96_1355 unplaced-scaffold na na JAVJAN010000096.1 = NZ_JAVJAN010000096.1 Primary Assembly 1355 na Scaffolds_97_1268 unplaced-scaffold na na JAVJAN010000097.1 = NZ_JAVJAN010000097.1 Primary Assembly 1268 na Scaffolds_98_1208 unplaced-scaffold na na JAVJAN010000098.1 = NZ_JAVJAN010000098.1 Primary Assembly 1208 na Scaffolds_99_1208 unplaced-scaffold na na JAVJAN010000099.1 = NZ_JAVJAN010000099.1 Primary Assembly 1208 na Scaffolds_100_1204 unplaced-scaffold na na JAVJAN010000100.1 = NZ_JAVJAN010000100.1 Primary Assembly 1204 na Scaffolds_101_1084 unplaced-scaffold na na JAVJAN010000101.1 = NZ_JAVJAN010000101.1 Primary Assembly 1084 na Scaffolds_102_1074 unplaced-scaffold na na JAVJAN010000102.1 = NZ_JAVJAN010000102.1 Primary Assembly 1074 na Scaffolds_103_1055 unplaced-scaffold na na JAVJAN010000103.1 = NZ_JAVJAN010000103.1 Primary Assembly 1055 na Scaffolds_104_945 unplaced-scaffold na na JAVJAN010000104.1 = NZ_JAVJAN010000104.1 Primary Assembly 945 na Scaffolds_105_889 unplaced-scaffold na na JAVJAN010000105.1 = NZ_JAVJAN010000105.1 Primary Assembly 889 na Scaffolds_106_836 unplaced-scaffold na na JAVJAN010000106.1 = NZ_JAVJAN010000106.1 Primary Assembly 836 na Scaffolds_107_796 unplaced-scaffold na na JAVJAN010000107.1 = NZ_JAVJAN010000107.1 Primary Assembly 796 na Scaffolds_108_764 unplaced-scaffold na na JAVJAN010000108.1 = NZ_JAVJAN010000108.1 Primary Assembly 764 na Scaffolds_109_652 unplaced-scaffold na na JAVJAN010000109.1 = NZ_JAVJAN010000109.1 Primary Assembly 652 na Scaffolds_110_514 unplaced-scaffold na na JAVJAN010000110.1 = NZ_JAVJAN010000110.1 Primary Assembly 514 na Scaffolds_111_507 unplaced-scaffold na na JAVJAN010000111.1 = NZ_JAVJAN010000111.1 Primary Assembly 507 na