# Assembly name: Nec_am_Ar_1.0 # Organism name: Necator americanus (New World hookworm) # Infraspecific name: strain=Aroian # Sex: pooled male and female # Taxid: 51031 # BioSample: SAMN37070185 # BioProject: PRJNA1007425 # Submitter: Cornell University # Date: 2023-09-22 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAVFWL01 # Assembly method: necat v. 0.0.1; sourmash v. 4.0.0; racon v. 1.4.20; medaka v. 1.3.2; POLCA (in MaSuRCA) v. 4.0.4; purge_dups v. 1.2.5; LRScaf v. 1.1.10; charcoal v. 2021-07-14; 3d-dna v. 180922 # Expected final version: yes # Genome coverage: 62.0x # Sequencing technology: Oxford Nanopore PromethION; Illumina HiSeq; Omni-C # RefSeq category: Representative Genome # GenBank assembly accession: GCA_031761385.1 # RefSeq assembly accession: GCF_031761385.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_031761415.1 GCF_031761415.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Necator_chrI assembled-molecule I Chromosome CM062678.1 = NC_087371.1 Primary Assembly 37580257 na Necator_chrII assembled-molecule II Chromosome CM062679.1 = NC_087372.1 Primary Assembly 42005516 na Necator_chrIII assembled-molecule III Chromosome CM062680.1 = NC_087373.1 Primary Assembly 41409002 na Necator_chrIV assembled-molecule IV Chromosome CM062681.1 = NC_087374.1 Primary Assembly 38919484 na Necator_chrV assembled-molecule V Chromosome CM062682.1 = NC_087375.1 Primary Assembly 37971000 na Necator_chrX assembled-molecule X Chromosome CM062683.1 = NC_087376.1 Primary Assembly 35540000 na Necator_2022.05.29.01.07 unplaced-scaffold na na JAVFWL010000007.1 = NW_026986548.1 Primary Assembly 771017 na Necator_2022.05.29.01.08 unplaced-scaffold na na JAVFWL010000008.1 = NW_026986549.1 Primary Assembly 50196 na Necator_2022.05.29.01.09 unplaced-scaffold na na JAVFWL010000009.1 = NW_026986550.1 Primary Assembly 50000 na Necator_2022.05.29.01.10 unplaced-scaffold na na JAVFWL010000010.1 = NW_026986551.1 Primary Assembly 26884 na Necator_2022.05.29.01.11 unplaced-scaffold na na JAVFWL010000011.1 = NW_026986552.1 Primary Assembly 24034 na Necator_2022.05.29.01.12 unplaced-scaffold na na JAVFWL010000012.1 = NW_026986553.1 Primary Assembly 23116 na Necator_2022.05.29.01.13 unplaced-scaffold na na JAVFWL010000013.1 = NW_026986554.1 Primary Assembly 20421 na Necator_2022.05.29.01.15 unplaced-scaffold na na JAVFWL010000014.1 = NW_026986555.1 Primary Assembly 11983 na Necator_2022.05.29.01.16 unplaced-scaffold na na JAVFWL010000015.1 = NW_026986556.1 Primary Assembly 8000 na Necator_2022.05.29.01.17 unplaced-scaffold na na JAVFWL010000016.1 = NW_026986557.1 Primary Assembly 6000 na Necator_2022.05.29.01.18 unplaced-scaffold na na JAVFWL010000017.1 = NW_026986558.1 Primary Assembly 4579 na Necator_2022.05.29.01.19 unplaced-scaffold na na JAVFWL010000018.1 = NW_026986559.1 Primary Assembly 4428 na Necator_2022.05.29.01.20 unplaced-scaffold na na JAVFWL010000019.1 = NW_026986560.1 Primary Assembly 3000 na Necator_2022.05.29.01.21 unplaced-scaffold na na JAVFWL010000020.1 = NW_026986561.1 Primary Assembly 2505 na Necator_2022.05.29.01.22 unplaced-scaffold na na JAVFWL010000021.1 = NW_026986562.1 Primary Assembly 2322 na Necator_2022.05.29.01.23 unplaced-scaffold na na JAVFWL010000022.1 = NW_026986563.1 Primary Assembly 2177 na Necator_2022.05.29.01.24 unplaced-scaffold na na JAVFWL010000023.1 = NW_026986564.1 Primary Assembly 2158 na Necator_2022.05.29.01.25 unplaced-scaffold na na JAVFWL010000024.1 = NW_026986565.1 Primary Assembly 2010 na Necator_2022.05.29.01.26 unplaced-scaffold na na JAVFWL010000025.1 = NW_026986566.1 Primary Assembly 2000 na Necator_2022.05.29.01.27 unplaced-scaffold na na JAVFWL010000026.1 = NW_026986567.1 Primary Assembly 1823 na Necator_2022.05.29.01.28 unplaced-scaffold na na JAVFWL010000027.1 = NW_026986568.1 Primary Assembly 1751 na Necator_2022.05.29.01.29 unplaced-scaffold na na JAVFWL010000028.1 = NW_026986569.1 Primary Assembly 1352 na Necator_2022.05.29.01.30 unplaced-scaffold na na JAVFWL010000029.1 = NW_026986570.1 Primary Assembly 1222 na Necator_2022.05.29.01.31 unplaced-scaffold na na JAVFWL010000030.1 = NW_026986571.1 Primary Assembly 1018 na Necator_2022.05.29.01.32 unplaced-scaffold na na JAVFWL010000031.1 = NW_026986572.1 Primary Assembly 1000 na Necator_2022.05.29.01.33 unplaced-scaffold na na JAVFWL010000032.1 = NW_026986573.1 Primary Assembly 1000 na Necator_2022.05.29.01.34 unplaced-scaffold na na JAVFWL010000033.1 = NW_026986574.1 Primary Assembly 1000 na Necator_2022.05.29.01.35 unplaced-scaffold na na JAVFWL010000034.1 = NW_026986575.1 Primary Assembly 1000 na Necator_2022.05.29.01.36 unplaced-scaffold na na JAVFWL010000035.1 = NW_026986576.1 Primary Assembly 1000 na Necator_2022.05.29.01.37 unplaced-scaffold na na JAVFWL010000036.1 = NW_026986577.1 Primary Assembly 1000 na Necator_2022.05.29.01.38 unplaced-scaffold na na JAVFWL010000037.1 = NW_026986578.1 Primary Assembly 1000 na Necator_2022.05.29.01.39 unplaced-scaffold na na JAVFWL010000038.1 = NW_026986579.1 Primary Assembly 1000 na