# Assembly name: ASM3356847v2 # Organism name: Henckelia pumila (eudicots) # Isolate: YLH828 # Taxid: 405737 # BioSample: SAMN31059962 # BioProject: PRJNA882983 # Submitter: South China Botanical Garden, Chinese Academy of Sciences # Date: 2023-11-13 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAPAFC01 # Assembly method: FALCON v. 0.3 # Expected final version: yes # Genome coverage: 206.75x # Sequencing technology: Illumina NovaSeq; PacBio Sequel # RefSeq category: Reference Genome # GenBank assembly accession: GCA_033568475.2 # RefSeq assembly accession: GCF_033568475.1 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_033568605.2 GCF_033568605.1 Primary Assembly ## GCF_049286295.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Chr1 assembled-molecule 1 Chromosome CM066027.1 = NC_133120.1 Primary Assembly 183104128 na Chr2 assembled-molecule 2 Chromosome CM066028.1 = NC_133121.1 Primary Assembly 201206415 na Chr3 assembled-molecule 3 Chromosome CM066029.1 = NC_133122.1 Primary Assembly 204334071 na Chr4 assembled-molecule 4 Chromosome CM066030.1 = NC_133123.1 Primary Assembly 233505333 na CTG_550 unplaced-scaffold na na JAPAFC010000005.1 = NW_027331862.1 Primary Assembly 512665 na CTG_248 unplaced-scaffold na na JAPAFC010000006.1 = NW_027331783.1 Primary Assembly 23492 na CTG_571 unplaced-scaffold na na JAPAFC010000009.1 = NW_027331865.1 Primary Assembly 18353 na CTG_89 unplaced-scaffold na na JAPAFC010000010.1 = NW_027331886.1 Primary Assembly 155180 na CTG_557 unplaced-scaffold na na JAPAFC010000011.1 = NW_027331863.1 Primary Assembly 149656 na CTG_649 unplaced-scaffold na na JAPAFC010000013.1 = NW_027331873.1 Primary Assembly 57310 na CTG_233 unplaced-scaffold na na JAPAFC010000015.1 = NW_027331781.1 Primary Assembly 184398 na CTG_319 unplaced-scaffold na na JAPAFC010000017.1 = NW_027331801.1 Primary Assembly 144463 na CTG_461:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000018.1 = NW_027331830.1 Primary Assembly 30000 na CTG_156:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000019.1 = NW_027331770.1 Primary Assembly 30000 na CTG_176 unplaced-scaffold na na JAPAFC010000020.1 = NW_027331772.1 Primary Assembly 99739 na CTG_461:::fragment_4:::debris unplaced-scaffold na na JAPAFC010000021.1 = NW_027331832.1 Primary Assembly 125000 na CTG_298:::fragment_6:::debris unplaced-scaffold na na JAPAFC010000022.1 = NW_027331799.1 Primary Assembly 125000 na CTG_298:::fragment_4:::debris unplaced-scaffold na na JAPAFC010000023.1 = NW_027331798.1 Primary Assembly 50000 na CTG_298:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000024.1 = NW_027331796.1 Primary Assembly 50000 na CTG_231:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000025.1 = NW_027331780.1 Primary Assembly 50000 na CTG_346:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000026.1 = NW_027331806.1 Primary Assembly 50000 na CTG_505:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000027.1 = NW_027331850.1 Primary Assembly 50000 na CTG_477:::fragment_4:::debris unplaced-scaffold na na JAPAFC010000028.1 = NW_027331843.1 Primary Assembly 30000 na CTG_28:::fragment_6:::debris unplaced-scaffold na na JAPAFC010000029.1 = NW_027331794.1 Primary Assembly 50000 na CTG_28:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000030.1 = NW_027331792.1 Primary Assembly 50000 na CTG_357:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000031.1 = NW_027331809.1 Primary Assembly 30000 na CTG_323:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000032.1 = NW_027331804.1 Primary Assembly 20000 na CTG_270:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000033.1 = NW_027331789.1 Primary Assembly 50000 na CTG_270:::fragment_3 unplaced-scaffold na na JAPAFC010000034.1 = NW_027331790.1 Primary Assembly 751828 na CTG_136:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000035.1 = NW_027331767.1 Primary Assembly 50000 na CTG_127 unplaced-scaffold na na JAPAFC010000036.1 = NW_027331766.1 Primary Assembly 76479 na CTG_206 unplaced-scaffold na na JAPAFC010000037.1 = NW_027331778.1 Primary Assembly 151194 na CTG_108 unplaced-scaffold na na JAPAFC010000038.1 = NW_027331760.1 Primary Assembly 181985 na CTG_111:::fragment_3 unplaced-scaffold na na JAPAFC010000039.1 = NW_027331762.1 Primary Assembly 440213 na CTG_41:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000040.1 = NW_027331825.1 Primary Assembly 125000 na CTG_41:::fragment_1 unplaced-scaffold na na JAPAFC010000041.1 = NW_027331824.1 Primary Assembly 626665 na CTG_277:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000042.1 = NW_027331791.1 Primary Assembly 20000 na CTG_107 unplaced-scaffold na na JAPAFC010000043.1 = NW_027331759.1 Primary Assembly 92711 na CTG_473 unplaced-scaffold na na JAPAFC010000044.1 = NW_027331835.1 Primary Assembly 346073 na CTG_430 unplaced-scaffold na na JAPAFC010000045.1 = NW_027331827.1 Primary Assembly 128095 na CTG_357:::fragment_5 unplaced-scaffold na na JAPAFC010000046.1 = NW_027331810.1 Primary Assembly 110684 na CTG_384 unplaced-scaffold na na JAPAFC010000047.1 = NW_027331816.1 Primary Assembly 276221 na CTG_416 unplaced-scaffold na na JAPAFC010000048.1 = NW_027331821.1 Primary Assembly 134090 na CTG_123 unplaced-scaffold na na JAPAFC010000052.1 = NW_027331765.1 Primary Assembly 241589 na CTG_637:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000053.1 = NW_027331872.1 Primary Assembly 30000 na CTG_476:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000054.1 = NW_027331837.1 Primary Assembly 125000 na CTG_560:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000055.1 = NW_027331864.1 Primary Assembly 50000 na CTG_358:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000056.1 = NW_027331811.1 Primary Assembly 50000 na CTG_321:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000057.1 = NW_027331803.1 Primary Assembly 30000 na CTG_321:::fragment_1 unplaced-scaffold na na JAPAFC010000058.1 = NW_027331802.1 Primary Assembly 140903 na CTG_373:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000059.1 = NW_027331812.1 Primary Assembly 20000 na CTG_664:::fragment_4:::debris unplaced-scaffold na na JAPAFC010000060.1 = NW_027331879.1 Primary Assembly 50000 na CTG_663:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000061.1 = NW_027331876.1 Primary Assembly 20000 na CTG_679:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000062.1 = NW_027331882.1 Primary Assembly 50000 na CTG_627:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000063.1 = NW_027331870.1 Primary Assembly 20000 na CTG_627:::fragment_1 unplaced-scaffold na na JAPAFC010000064.1 = NW_027331869.1 Primary Assembly 1065060 na CTG_517:::fragment_1 unplaced-scaffold na na JAPAFC010000065.1 = NW_027331853.1 Primary Assembly 331552 na CTG_494:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000066.1 = NW_027331847.1 Primary Assembly 50000 na CTG_26:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000067.1 = NW_027331787.1 Primary Assembly 50000 na CTG_418 unplaced-scaffold na na JAPAFC010000068.1 = NW_027331823.1 Primary Assembly 100896 na CTG_674:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000069.1 = NW_027331880.1 Primary Assembly 50000 na CTG_674:::fragment_3 unplaced-scaffold na na JAPAFC010000070.1 = NW_027331881.1 Primary Assembly 316770 na CTG_611 unplaced-scaffold na na JAPAFC010000071.1 = NW_027331867.1 Primary Assembly 86007 na CTG_417 unplaced-scaffold na na JAPAFC010000072.1 = NW_027331822.1 Primary Assembly 102469 na CTG_517:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000073.1 = NW_027331854.1 Primary Assembly 20000 na CTG_245:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000074.1 = NW_027331782.1 Primary Assembly 50000 na CTG_198:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000075.1 = NW_027331774.1 Primary Assembly 20000 na CTG_198:::fragment_1 unplaced-scaffold na na JAPAFC010000076.1 = NW_027331773.1 Primary Assembly 152583 na CTG_198:::fragment_4:::debris unplaced-scaffold na na JAPAFC010000077.1 = NW_027331775.1 Primary Assembly 20000 na CTG_544:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000078.1 = NW_027331860.1 Primary Assembly 20000 na CTG_53:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000079.1 = NW_027331858.1 Primary Assembly 30000 na CTG_28:::fragment_4:::debris unplaced-scaffold na na JAPAFC010000080.1 = NW_027331793.1 Primary Assembly 125000 na CTG_259:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000081.1 = NW_027331785.1 Primary Assembly 20000 na CTG_44:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000082.1 = NW_027331828.1 Primary Assembly 50000 na CTG_44:::fragment_3 unplaced-scaffold na na JAPAFC010000083.1 = NW_027331829.1 Primary Assembly 348917 na CTG_112:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000084.1 = NW_027331764.1 Primary Assembly 50000 na CTG_112:::fragment_1 unplaced-scaffold na na JAPAFC010000085.1 = NW_027331763.1 Primary Assembly 776534 na CTG_652:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000086.1 = NW_027331875.1 Primary Assembly 50000 na CTG_19:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000087.1 = NW_027331776.1 Primary Assembly 125000 na CTG_601:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000088.1 = NW_027331866.1 Primary Assembly 500000 na CTG_486:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000089.1 = NW_027331846.1 Primary Assembly 125000 na CTG_477:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000090.1 = NW_027331841.1 Primary Assembly 125000 na CTG_80:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000091.1 = NW_027331884.1 Primary Assembly 125000 na CTG_477:::fragment_1 unplaced-scaffold na na JAPAFC010000092.1 = NW_027331840.1 Primary Assembly 883365 na CTG_80:::fragment_3 unplaced-scaffold na na JAPAFC010000093.1 = NW_027331885.1 Primary Assembly 466635 na CTG_525:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000094.1 = NW_027331856.1 Primary Assembly 20000 na CTG_525:::fragment_1 unplaced-scaffold na na JAPAFC010000095.1 = NW_027331855.1 Primary Assembly 158312 na CTG_485:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000096.1 = NW_027331844.1 Primary Assembly 30000 na CTG_485:::fragment_3 unplaced-scaffold na na JAPAFC010000097.1 = NW_027331845.1 Primary Assembly 202989 na CTG_142:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000098.1 = NW_027331769.1 Primary Assembly 125000 na CTG_512:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000099.1 = NW_027331852.1 Primary Assembly 50000 na CTG_512:::fragment_1 unplaced-scaffold na na JAPAFC010000100.1 = NW_027331851.1 Primary Assembly 185948 na CTG_664:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000101.1 = NW_027331878.1 Primary Assembly 50000 na CTG_664:::fragment_1 unplaced-scaffold na na JAPAFC010000102.1 = NW_027331877.1 Primary Assembly 266400 na CTG_380:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000103.1 = NW_027331815.1 Primary Assembly 30000 na CTG_380:::fragment_1 unplaced-scaffold na na JAPAFC010000104.1 = NW_027331814.1 Primary Assembly 140517 na CTG_389:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000105.1 = NW_027331818.1 Primary Assembly 30000 na CTG_389:::fragment_1 unplaced-scaffold na na JAPAFC010000106.1 = NW_027331817.1 Primary Assembly 128164 na CTG_140:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000107.1 = NW_027331768.1 Primary Assembly 20000 na CTG_291 unplaced-scaffold na na JAPAFC010000108.1 = NW_027331795.1 Primary Assembly 55246 na CTG_549 unplaced-scaffold na na JAPAFC010000109.1 = NW_027331861.1 Primary Assembly 278859 na CTG_266 unplaced-scaffold na na JAPAFC010000110.1 = NW_027331786.1 Primary Assembly 266633 na CTG_498 unplaced-scaffold na na JAPAFC010000111.1 = NW_027331848.1 Primary Assembly 150330 na CTG_542 unplaced-scaffold na na JAPAFC010000112.1 = NW_027331859.1 Primary Assembly 55413 na CTG_504:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000113.1 = NW_027331849.1 Primary Assembly 20000 na CTG_19:::fragment_3 unplaced-scaffold na na JAPAFC010000114.1 = NW_027331777.1 Primary Assembly 2315292 na CTG_270:::fragment_1 unplaced-scaffold na na JAPAFC010000115.1 = NW_027331788.1 Primary Assembly 1824460 na CTG_429 unplaced-scaffold na na JAPAFC010000116.1 = NW_027331826.1 Primary Assembly 3923688 na CTG_207 unplaced-scaffold na na JAPAFC010000117.1 = NW_027331779.1 Primary Assembly 496433 na CTG_170 unplaced-scaffold na na JAPAFC010000118.1 = NW_027331771.1 Primary Assembly 1817198 na CTG_38 unplaced-scaffold na na JAPAFC010000119.1 = NW_027331813.1 Primary Assembly 1745512 na CTG_652:::fragment_1 unplaced-scaffold na na JAPAFC010000120.1 = NW_027331874.1 Primary Assembly 1032417 na CTG_354:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000121.1 = NW_027331808.1 Primary Assembly 10000 na CTG_354:::fragment_1 unplaced-scaffold na na JAPAFC010000122.1 = NW_027331807.1 Primary Assembly 136955 na CTG_476:::fragment_4:::debris unplaced-scaffold na na JAPAFC010000123.1 = NW_027331839.1 Primary Assembly 10000 na CTG_476:::fragment_3 unplaced-scaffold na na JAPAFC010000124.1 = NW_027331838.1 Primary Assembly 66728 na CTG_612 unplaced-scaffold na na JAPAFC010000125.1 = NW_027331868.1 Primary Assembly 69192 na CTG_62:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000127.1 = NW_027331871.1 Primary Assembly 30000 na CTG_338 unplaced-scaffold na na JAPAFC010000128.1 = NW_027331805.1 Primary Assembly 140302 na CTG_298:::fragment_3 unplaced-scaffold na na JAPAFC010000129.1 = NW_027331797.1 Primary Assembly 1110000 na CTG_477:::fragment_3 unplaced-scaffold na na JAPAFC010000130.1 = NW_027331842.1 Primary Assembly 631045 na CTG_80:::fragment_1 unplaced-scaffold na na JAPAFC010000131.1 = NW_027331883.1 Primary Assembly 1965149 na CTG_525:::fragment_3 unplaced-scaffold na na JAPAFC010000132.1 = NW_027331857.1 Primary Assembly 5299851 na CTG_254 unplaced-scaffold na na JAPAFC010000133.1 = NW_027331784.1 Primary Assembly 562680 na CTG_391:::fragment_3 unplaced-scaffold na na JAPAFC010000134.1 = NW_027331820.1 Primary Assembly 517320 na CTG_472 unplaced-scaffold na na JAPAFC010000135.1 = NW_027331834.1 Primary Assembly 263685 na CTG_301 unplaced-scaffold na na JAPAFC010000136.1 = NW_027331800.1 Primary Assembly 125044 na CTG_461:::fragment_3 unplaced-scaffold na na JAPAFC010000137.1 = NW_027331831.1 Primary Assembly 16255000 na CTG_466 unplaced-scaffold na na JAPAFC010000138.1 = NW_027331833.1 Primary Assembly 6982115 na CTG_391:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000139.1 = NW_027331819.1 Primary Assembly 20000 na CTG_111:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000140.1 = NW_027331761.1 Primary Assembly 10000 na CTG_475:::fragment_2:::debris unplaced-scaffold na na JAPAFC010000141.1 = NW_027331836.1 Primary Assembly 50000 na Pltd assembled-molecule Pltd Chloroplast na <> NC_065361.1 non-nuclear 153551 na