# Assembly name: ASM3717958v1 # Organism name: Mesorhizobium argentiipisi (a-proteobacteria) # Infraspecific name: strain=Cs1330R2N1 # Taxid: 3015175 # BioSample: SAMN32187528 # BioProject: PRJNA911588 # Submitter: University of Pretoria # Date: 2024-03-15 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAPYKO01 # Assembly method: SPAdes v. 3.12.0 # Expected final version: yes # Genome coverage: 117x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_037179585.1 # RefSeq assembly accession: GCF_037179585.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_037179595.1 GCF_037179595.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig00001 unplaced-scaffold na na JAPYKO010000001.1 = NZ_JAPYKO010000001.1 Primary Assembly 611319 na contig00002 unplaced-scaffold na na JAPYKO010000002.1 = NZ_JAPYKO010000002.1 Primary Assembly 560570 na contig00003 unplaced-scaffold na na JAPYKO010000003.1 = NZ_JAPYKO010000003.1 Primary Assembly 554557 na contig00004 unplaced-scaffold na na JAPYKO010000004.1 = NZ_JAPYKO010000004.1 Primary Assembly 352143 na contig00005 unplaced-scaffold na na JAPYKO010000005.1 = NZ_JAPYKO010000005.1 Primary Assembly 282127 na contig00006 unplaced-scaffold na na JAPYKO010000006.1 = NZ_JAPYKO010000006.1 Primary Assembly 263925 na contig00007 unplaced-scaffold na na JAPYKO010000007.1 = NZ_JAPYKO010000007.1 Primary Assembly 212660 na contig00008 unplaced-scaffold na na JAPYKO010000008.1 = NZ_JAPYKO010000008.1 Primary Assembly 207106 na contig00009 unplaced-scaffold na na JAPYKO010000009.1 = NZ_JAPYKO010000009.1 Primary Assembly 198494 na contig00010 unplaced-scaffold na na JAPYKO010000010.1 = NZ_JAPYKO010000010.1 Primary Assembly 194949 na contig00011 unplaced-scaffold na na JAPYKO010000011.1 = NZ_JAPYKO010000011.1 Primary Assembly 188352 na contig00012 unplaced-scaffold na na JAPYKO010000012.1 = NZ_JAPYKO010000012.1 Primary Assembly 185633 na contig00013 unplaced-scaffold na na JAPYKO010000013.1 = NZ_JAPYKO010000013.1 Primary Assembly 183897 na contig00014 unplaced-scaffold na na JAPYKO010000014.1 = NZ_JAPYKO010000014.1 Primary Assembly 180563 na contig00015 unplaced-scaffold na na JAPYKO010000015.1 = NZ_JAPYKO010000015.1 Primary Assembly 168595 na contig00016 unplaced-scaffold na na JAPYKO010000016.1 = NZ_JAPYKO010000016.1 Primary Assembly 164414 na contig00017 unplaced-scaffold na na JAPYKO010000017.1 = NZ_JAPYKO010000017.1 Primary Assembly 129412 na contig00018 unplaced-scaffold na na JAPYKO010000018.1 = NZ_JAPYKO010000018.1 Primary Assembly 127155 na contig00019 unplaced-scaffold na na JAPYKO010000019.1 = NZ_JAPYKO010000019.1 Primary Assembly 121325 na contig00020 unplaced-scaffold na na JAPYKO010000020.1 = NZ_JAPYKO010000020.1 Primary Assembly 118379 na contig00021 unplaced-scaffold na na JAPYKO010000021.1 = NZ_JAPYKO010000021.1 Primary Assembly 108426 na contig00022 unplaced-scaffold na na JAPYKO010000022.1 = NZ_JAPYKO010000022.1 Primary Assembly 102391 na contig00023 unplaced-scaffold na na JAPYKO010000023.1 = NZ_JAPYKO010000023.1 Primary Assembly 101510 na contig00024 unplaced-scaffold na na JAPYKO010000024.1 = NZ_JAPYKO010000024.1 Primary Assembly 99260 na contig00025 unplaced-scaffold na na JAPYKO010000025.1 = NZ_JAPYKO010000025.1 Primary Assembly 86704 na contig00026 unplaced-scaffold na na JAPYKO010000026.1 = NZ_JAPYKO010000026.1 Primary Assembly 83386 na contig00027 unplaced-scaffold na na JAPYKO010000027.1 = NZ_JAPYKO010000027.1 Primary Assembly 79086 na contig00028 unplaced-scaffold na na JAPYKO010000028.1 = NZ_JAPYKO010000028.1 Primary Assembly 77861 na contig00029 unplaced-scaffold na na JAPYKO010000029.1 = NZ_JAPYKO010000029.1 Primary Assembly 67996 na contig00030 unplaced-scaffold na na JAPYKO010000030.1 = NZ_JAPYKO010000030.1 Primary Assembly 67922 na contig00031 unplaced-scaffold na na JAPYKO010000031.1 = NZ_JAPYKO010000031.1 Primary Assembly 65418 na contig00032 unplaced-scaffold na na JAPYKO010000032.1 = NZ_JAPYKO010000032.1 Primary Assembly 64474 na contig00033 unplaced-scaffold na na JAPYKO010000033.1 = NZ_JAPYKO010000033.1 Primary Assembly 64421 na contig00034 unplaced-scaffold na na JAPYKO010000034.1 = NZ_JAPYKO010000034.1 Primary Assembly 63775 na contig00035 unplaced-scaffold na na JAPYKO010000035.1 = NZ_JAPYKO010000035.1 Primary Assembly 62122 na contig00036 unplaced-scaffold na na JAPYKO010000036.1 = NZ_JAPYKO010000036.1 Primary Assembly 61054 na contig00037 unplaced-scaffold na na JAPYKO010000037.1 = NZ_JAPYKO010000037.1 Primary Assembly 53914 na contig00038 unplaced-scaffold na na JAPYKO010000038.1 = NZ_JAPYKO010000038.1 Primary Assembly 52852 na contig00039 unplaced-scaffold na na JAPYKO010000039.1 = NZ_JAPYKO010000039.1 Primary Assembly 44104 na contig00040 unplaced-scaffold na na JAPYKO010000040.1 = NZ_JAPYKO010000040.1 Primary Assembly 28617 na contig00041 unplaced-scaffold na na JAPYKO010000041.1 = NZ_JAPYKO010000041.1 Primary Assembly 27006 na contig00042 unplaced-scaffold na na JAPYKO010000042.1 = NZ_JAPYKO010000042.1 Primary Assembly 26118 na contig00043 unplaced-scaffold na na JAPYKO010000043.1 = NZ_JAPYKO010000043.1 Primary Assembly 25895 na contig00044 unplaced-scaffold na na JAPYKO010000044.1 = NZ_JAPYKO010000044.1 Primary Assembly 24683 na contig00045 unplaced-scaffold na na JAPYKO010000045.1 = NZ_JAPYKO010000045.1 Primary Assembly 23817 na contig00046 unplaced-scaffold na na JAPYKO010000046.1 = NZ_JAPYKO010000046.1 Primary Assembly 22923 na contig00047 unplaced-scaffold na na JAPYKO010000047.1 = NZ_JAPYKO010000047.1 Primary Assembly 22587 na contig00048 unplaced-scaffold na na JAPYKO010000048.1 = NZ_JAPYKO010000048.1 Primary Assembly 21941 na contig00049 unplaced-scaffold na na JAPYKO010000049.1 = NZ_JAPYKO010000049.1 Primary Assembly 21644 na contig00050 unplaced-scaffold na na JAPYKO010000050.1 = NZ_JAPYKO010000050.1 Primary Assembly 20749 na contig00051 unplaced-scaffold na na JAPYKO010000051.1 = NZ_JAPYKO010000051.1 Primary Assembly 20467 na contig00052 unplaced-scaffold na na JAPYKO010000052.1 = NZ_JAPYKO010000052.1 Primary Assembly 20438 na contig00053 unplaced-scaffold na na JAPYKO010000053.1 = NZ_JAPYKO010000053.1 Primary Assembly 20129 na contig00054 unplaced-scaffold na na JAPYKO010000054.1 = NZ_JAPYKO010000054.1 Primary Assembly 18697 na contig00055 unplaced-scaffold na na JAPYKO010000055.1 = NZ_JAPYKO010000055.1 Primary Assembly 18074 na contig00056 unplaced-scaffold na na JAPYKO010000056.1 = NZ_JAPYKO010000056.1 Primary Assembly 14452 na contig00057 unplaced-scaffold na na JAPYKO010000057.1 = NZ_JAPYKO010000057.1 Primary Assembly 13232 na contig00058 unplaced-scaffold na na JAPYKO010000058.1 = NZ_JAPYKO010000058.1 Primary Assembly 13175 na contig00059 unplaced-scaffold na na JAPYKO010000059.1 = NZ_JAPYKO010000059.1 Primary Assembly 12633 na contig00060 unplaced-scaffold na na JAPYKO010000060.1 = NZ_JAPYKO010000060.1 Primary Assembly 9569 na contig00061 unplaced-scaffold na na JAPYKO010000061.1 = NZ_JAPYKO010000061.1 Primary Assembly 8890 na contig00062 unplaced-scaffold na na JAPYKO010000062.1 = NZ_JAPYKO010000062.1 Primary Assembly 7798 na contig00063 unplaced-scaffold na na JAPYKO010000063.1 = NZ_JAPYKO010000063.1 Primary Assembly 7178 na contig00064 unplaced-scaffold na na JAPYKO010000064.1 = NZ_JAPYKO010000064.1 Primary Assembly 6753 na contig00065 unplaced-scaffold na na JAPYKO010000065.1 = NZ_JAPYKO010000065.1 Primary Assembly 6376 na contig00066 unplaced-scaffold na na JAPYKO010000066.1 = NZ_JAPYKO010000066.1 Primary Assembly 6214 na contig00067 unplaced-scaffold na na JAPYKO010000067.1 = NZ_JAPYKO010000067.1 Primary Assembly 5867 na contig00068 unplaced-scaffold na na JAPYKO010000068.1 = NZ_JAPYKO010000068.1 Primary Assembly 3939 na contig00069 unplaced-scaffold na na JAPYKO010000069.1 = NZ_JAPYKO010000069.1 Primary Assembly 3936 na contig00070 unplaced-scaffold na na JAPYKO010000070.1 = NZ_JAPYKO010000070.1 Primary Assembly 3127 na contig00071 unplaced-scaffold na na JAPYKO010000071.1 = NZ_JAPYKO010000071.1 Primary Assembly 2844 na contig00073 unplaced-scaffold na na JAPYKO010000072.1 = NZ_JAPYKO010000072.1 Primary Assembly 2181 na contig00074 unplaced-scaffold na na JAPYKO010000073.1 = NZ_JAPYKO010000073.1 Primary Assembly 1974 na contig00075 unplaced-scaffold na na JAPYKO010000074.1 = NZ_JAPYKO010000074.1 Primary Assembly 1571 na contig00076 unplaced-scaffold na na JAPYKO010000075.1 = NZ_JAPYKO010000075.1 Primary Assembly 1469 na contig00077 unplaced-scaffold na na JAPYKO010000076.1 = NZ_JAPYKO010000076.1 Primary Assembly 1465 na contig00078 unplaced-scaffold na na JAPYKO010000077.1 = NZ_JAPYKO010000077.1 Primary Assembly 1429 na contig00079 unplaced-scaffold na na JAPYKO010000078.1 = NZ_JAPYKO010000078.1 Primary Assembly 1406 na contig00080 unplaced-scaffold na na JAPYKO010000079.1 = NZ_JAPYKO010000079.1 Primary Assembly 1251 na contig00081 unplaced-scaffold na na JAPYKO010000080.1 = NZ_JAPYKO010000080.1 Primary Assembly 1205 na contig00082 unplaced-scaffold na na JAPYKO010000081.1 = NZ_JAPYKO010000081.1 Primary Assembly 1143 na contig00083 unplaced-scaffold na na JAPYKO010000082.1 = NZ_JAPYKO010000082.1 Primary Assembly 1088 na contig00084 unplaced-scaffold na na JAPYKO010000083.1 = NZ_JAPYKO010000083.1 Primary Assembly 1043 na contig00085 unplaced-scaffold na na JAPYKO010000084.1 = NZ_JAPYKO010000084.1 Primary Assembly 1031 na contig00087 unplaced-scaffold na na JAPYKO010000085.1 = NZ_JAPYKO010000085.1 Primary Assembly 712 na contig00088 unplaced-scaffold na na JAPYKO010000086.1 = NZ_JAPYKO010000086.1 Primary Assembly 685 na contig00090 unplaced-scaffold na na JAPYKO010000087.1 = NZ_JAPYKO010000087.1 Primary Assembly 632 na contig00091 unplaced-scaffold na na JAPYKO010000088.1 = NZ_JAPYKO010000088.1 Primary Assembly 556 na contig00092 unplaced-scaffold na na JAPYKO010000089.1 = NZ_JAPYKO010000089.1 Primary Assembly 543 na contig00093 unplaced-scaffold na na JAPYKO010000090.1 = NZ_JAPYKO010000090.1 Primary Assembly 532 na contig00095 unplaced-scaffold na na JAPYKO010000091.1 = NZ_JAPYKO010000091.1 Primary Assembly 519 na contig00096 unplaced-scaffold na na JAPYKO010000092.1 = NZ_JAPYKO010000092.1 Primary Assembly 518 na contig00097 unplaced-scaffold na na JAPYKO010000093.1 = NZ_JAPYKO010000093.1 Primary Assembly 515 na contig00099 unplaced-scaffold na na JAPYKO010000094.1 = NZ_JAPYKO010000094.1 Primary Assembly 513 na contig00100 unplaced-scaffold na na JAPYKO010000095.1 = NZ_JAPYKO010000095.1 Primary Assembly 510 na contig00101 unplaced-scaffold na na JAPYKO010000096.1 = NZ_JAPYKO010000096.1 Primary Assembly 506 na contig00102 unplaced-scaffold na na JAPYKO010000097.1 = NZ_JAPYKO010000097.1 Primary Assembly 505 na contig00103 unplaced-scaffold na na JAPYKO010000098.1 = NZ_JAPYKO010000098.1 Primary Assembly 498 na contig00104 unplaced-scaffold na na JAPYKO010000099.1 = NZ_JAPYKO010000099.1 Primary Assembly 495 na contig00105 unplaced-scaffold na na JAPYKO010000100.1 = NZ_JAPYKO010000100.1 Primary Assembly 493 na contig00106 unplaced-scaffold na na JAPYKO010000101.1 = NZ_JAPYKO010000101.1 Primary Assembly 492 na contig00107 unplaced-scaffold na na JAPYKO010000102.1 = NZ_JAPYKO010000102.1 Primary Assembly 483 na contig00108 unplaced-scaffold na na JAPYKO010000103.1 = NZ_JAPYKO010000103.1 Primary Assembly 482 na contig00109 unplaced-scaffold na na JAPYKO010000104.1 = NZ_JAPYKO010000104.1 Primary Assembly 482 na contig00110 unplaced-scaffold na na JAPYKO010000105.1 = NZ_JAPYKO010000105.1 Primary Assembly 466 na contig00112 unplaced-scaffold na na JAPYKO010000106.1 = NZ_JAPYKO010000106.1 Primary Assembly 463 na contig00113 unplaced-scaffold na na JAPYKO010000107.1 = NZ_JAPYKO010000107.1 Primary Assembly 460 na contig00114 unplaced-scaffold na na JAPYKO010000108.1 = NZ_JAPYKO010000108.1 Primary Assembly 459 na contig00115 unplaced-scaffold na na JAPYKO010000109.1 = NZ_JAPYKO010000109.1 Primary Assembly 456 na contig00116 unplaced-scaffold na na JAPYKO010000110.1 = NZ_JAPYKO010000110.1 Primary Assembly 454 na contig00117 unplaced-scaffold na na JAPYKO010000111.1 = NZ_JAPYKO010000111.1 Primary Assembly 450 na contig00118 unplaced-scaffold na na JAPYKO010000112.1 = NZ_JAPYKO010000112.1 Primary Assembly 448 na contig00119 unplaced-scaffold na na JAPYKO010000113.1 = NZ_JAPYKO010000113.1 Primary Assembly 446 na contig00120 unplaced-scaffold na na JAPYKO010000114.1 = NZ_JAPYKO010000114.1 Primary Assembly 445 na contig00121 unplaced-scaffold na na JAPYKO010000115.1 = NZ_JAPYKO010000115.1 Primary Assembly 444 na contig00122 unplaced-scaffold na na JAPYKO010000116.1 = NZ_JAPYKO010000116.1 Primary Assembly 443 na contig00123 unplaced-scaffold na na JAPYKO010000117.1 = NZ_JAPYKO010000117.1 Primary Assembly 443 na contig00124 unplaced-scaffold na na JAPYKO010000118.1 = NZ_JAPYKO010000118.1 Primary Assembly 440 na contig00125 unplaced-scaffold na na JAPYKO010000119.1 = NZ_JAPYKO010000119.1 Primary Assembly 438 na contig00126 unplaced-scaffold na na JAPYKO010000120.1 = NZ_JAPYKO010000120.1 Primary Assembly 437 na contig00127 unplaced-scaffold na na JAPYKO010000121.1 = NZ_JAPYKO010000121.1 Primary Assembly 434 na contig00128 unplaced-scaffold na na JAPYKO010000122.1 = NZ_JAPYKO010000122.1 Primary Assembly 432 na contig00130 unplaced-scaffold na na JAPYKO010000123.1 = NZ_JAPYKO010000123.1 Primary Assembly 430 na contig00131 unplaced-scaffold na na JAPYKO010000124.1 = NZ_JAPYKO010000124.1 Primary Assembly 430 na contig00132 unplaced-scaffold na na JAPYKO010000125.1 = NZ_JAPYKO010000125.1 Primary Assembly 401 na contig00133 unplaced-scaffold na na JAPYKO010000126.1 = NZ_JAPYKO010000126.1 Primary Assembly 382 na contig00134 unplaced-scaffold na na JAPYKO010000127.1 = NZ_JAPYKO010000127.1 Primary Assembly 380 na contig00135 unplaced-scaffold na na JAPYKO010000128.1 = NZ_JAPYKO010000128.1 Primary Assembly 370 na contig00136 unplaced-scaffold na na JAPYKO010000129.1 = NZ_JAPYKO010000129.1 Primary Assembly 363 na contig00137 unplaced-scaffold na na JAPYKO010000130.1 = NZ_JAPYKO010000130.1 Primary Assembly 308 na contig00138 unplaced-scaffold na na JAPYKO010000131.1 = NZ_JAPYKO010000131.1 Primary Assembly 307 na contig00139 unplaced-scaffold na na JAPYKO010000132.1 = NZ_JAPYKO010000132.1 Primary Assembly 307 na contig00140 unplaced-scaffold na na JAPYKO010000133.1 = NZ_JAPYKO010000133.1 Primary Assembly 278 na contig00141 unplaced-scaffold na na JAPYKO010000134.1 = NZ_JAPYKO010000134.1 Primary Assembly 274 na contig00142 unplaced-scaffold na na JAPYKO010000135.1 = NZ_JAPYKO010000135.1 Primary Assembly 268 na contig00143 unplaced-scaffold na na JAPYKO010000136.1 = NZ_JAPYKO010000136.1 Primary Assembly 258 na contig00144 unplaced-scaffold na na JAPYKO010000137.1 = NZ_JAPYKO010000137.1 Primary Assembly 251 na contig00145 unplaced-scaffold na na JAPYKO010000138.1 = NZ_JAPYKO010000138.1 Primary Assembly 251 na contig00146 unplaced-scaffold na na JAPYKO010000139.1 = NZ_JAPYKO010000139.1 Primary Assembly 247 na contig00147 unplaced-scaffold na na JAPYKO010000140.1 = NZ_JAPYKO010000140.1 Primary Assembly 247 na contig00148 unplaced-scaffold na na JAPYKO010000141.1 = NZ_JAPYKO010000141.1 Primary Assembly 241 na contig00149 unplaced-scaffold na na JAPYKO010000142.1 = NZ_JAPYKO010000142.1 Primary Assembly 223 na contig00150 unplaced-scaffold na na JAPYKO010000143.1 = NZ_JAPYKO010000143.1 Primary Assembly 216 na