# Assembly name: ASM4029754v1 # Organism name: Thioclava kandeliae (a-proteobacteria) # Infraspecific name: strain=CPCC 100088 # Taxid: 3070818 # BioSample: SAMN39436866 # BioProject: PRJNA1064615 # Submitter: Institute of Medicinal Biotechnology # Date: 2024-06-24 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAYWLC01 # Assembly method: SOAPdenovo v. 2.04 # Expected final version: yes # Genome coverage: 40.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_040297545.1 # RefSeq assembly accession: GCF_040297545.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_040297555.1 GCF_040297555.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1_1 unplaced-scaffold na na JAYWLC010000001.1 = NZ_JAYWLC010000001.1 Primary Assembly 567320 na Scaffold2_1 unplaced-scaffold na na JAYWLC010000002.1 = NZ_JAYWLC010000002.1 Primary Assembly 425934 na Scaffold3_1 unplaced-scaffold na na JAYWLC010000003.1 = NZ_JAYWLC010000003.1 Primary Assembly 334694 na Scaffold4_1 unplaced-scaffold na na JAYWLC010000004.1 = NZ_JAYWLC010000004.1 Primary Assembly 304141 na Scaffold5_1 unplaced-scaffold na na JAYWLC010000005.1 = NZ_JAYWLC010000005.1 Primary Assembly 263132 na Scaffold6_1 unplaced-scaffold na na JAYWLC010000006.1 = NZ_JAYWLC010000006.1 Primary Assembly 223899 na Scaffold7_1 unplaced-scaffold na na JAYWLC010000007.1 = NZ_JAYWLC010000007.1 Primary Assembly 204733 na Scaffold8_1 unplaced-scaffold na na JAYWLC010000008.1 = NZ_JAYWLC010000008.1 Primary Assembly 188696 na Scaffold9_1 unplaced-scaffold na na JAYWLC010000009.1 = NZ_JAYWLC010000009.1 Primary Assembly 187550 na Scaffold10_1 unplaced-scaffold na na JAYWLC010000010.1 = NZ_JAYWLC010000010.1 Primary Assembly 57946 na Scaffold10_2 unplaced-scaffold na na JAYWLC010000011.1 = NZ_JAYWLC010000011.1 Primary Assembly 97130 na Scaffold11_1 unplaced-scaffold na na JAYWLC010000012.1 = NZ_JAYWLC010000012.1 Primary Assembly 113923 na Scaffold12_1 unplaced-scaffold na na JAYWLC010000013.1 = NZ_JAYWLC010000013.1 Primary Assembly 102559 na Scaffold13_1 unplaced-scaffold na na JAYWLC010000014.1 = NZ_JAYWLC010000014.1 Primary Assembly 99332 na Scaffold14_1 unplaced-scaffold na na JAYWLC010000015.1 = NZ_JAYWLC010000015.1 Primary Assembly 92762 na Scaffold15_1 unplaced-scaffold na na JAYWLC010000016.1 = NZ_JAYWLC010000016.1 Primary Assembly 90900 na Scaffold16_1 unplaced-scaffold na na JAYWLC010000017.1 = NZ_JAYWLC010000017.1 Primary Assembly 88614 na Scaffold17_1 unplaced-scaffold na na JAYWLC010000018.1 = NZ_JAYWLC010000018.1 Primary Assembly 87831 na Scaffold18_1 unplaced-scaffold na na JAYWLC010000019.1 = NZ_JAYWLC010000019.1 Primary Assembly 71049 na Scaffold19_1 unplaced-scaffold na na JAYWLC010000020.1 = NZ_JAYWLC010000020.1 Primary Assembly 60567 na Scaffold20_1 unplaced-scaffold na na JAYWLC010000021.1 = NZ_JAYWLC010000021.1 Primary Assembly 41351 na Scaffold21_1 unplaced-scaffold na na JAYWLC010000022.1 = NZ_JAYWLC010000022.1 Primary Assembly 39124 na Scaffold22_1 unplaced-scaffold na na JAYWLC010000023.1 = NZ_JAYWLC010000023.1 Primary Assembly 31027 na Scaffold23_1 unplaced-scaffold na na JAYWLC010000024.1 = NZ_JAYWLC010000024.1 Primary Assembly 28363 na Scaffold24_1 unplaced-scaffold na na JAYWLC010000025.1 = NZ_JAYWLC010000025.1 Primary Assembly 25776 na Scaffold25_1 unplaced-scaffold na na JAYWLC010000026.1 = NZ_JAYWLC010000026.1 Primary Assembly 25487 na Scaffold26_1 unplaced-scaffold na na JAYWLC010000027.1 = NZ_JAYWLC010000027.1 Primary Assembly 24873 na Scaffold27_1 unplaced-scaffold na na JAYWLC010000028.1 = NZ_JAYWLC010000028.1 Primary Assembly 23859 na Scaffold28_1 unplaced-scaffold na na JAYWLC010000029.1 = NZ_JAYWLC010000029.1 Primary Assembly 23417 na Scaffold29_1 unplaced-scaffold na na JAYWLC010000030.1 = NZ_JAYWLC010000030.1 Primary Assembly 23095 na Scaffold30_1 unplaced-scaffold na na JAYWLC010000031.1 = NZ_JAYWLC010000031.1 Primary Assembly 21665 na Scaffold31_1 unplaced-scaffold na na JAYWLC010000032.1 = NZ_JAYWLC010000032.1 Primary Assembly 20290 na Scaffold32_1 unplaced-scaffold na na JAYWLC010000033.1 = NZ_JAYWLC010000033.1 Primary Assembly 19985 na Scaffold33_1 unplaced-scaffold na na JAYWLC010000034.1 = NZ_JAYWLC010000034.1 Primary Assembly 19552 na Scaffold34_1 unplaced-scaffold na na JAYWLC010000035.1 = NZ_JAYWLC010000035.1 Primary Assembly 18927 na Scaffold35_1 unplaced-scaffold na na JAYWLC010000036.1 = NZ_JAYWLC010000036.1 Primary Assembly 18780 na Scaffold36_1 unplaced-scaffold na na JAYWLC010000037.1 = NZ_JAYWLC010000037.1 Primary Assembly 17284 na Scaffold37_1 unplaced-scaffold na na JAYWLC010000038.1 = NZ_JAYWLC010000038.1 Primary Assembly 16960 na Scaffold38_1 unplaced-scaffold na na JAYWLC010000039.1 = NZ_JAYWLC010000039.1 Primary Assembly 16419 na Scaffold39_1 unplaced-scaffold na na JAYWLC010000040.1 = NZ_JAYWLC010000040.1 Primary Assembly 14717 na Scaffold40_1 unplaced-scaffold na na JAYWLC010000041.1 = NZ_JAYWLC010000041.1 Primary Assembly 14510 na Scaffold41_1 unplaced-scaffold na na JAYWLC010000042.1 = NZ_JAYWLC010000042.1 Primary Assembly 13335 na Scaffold42_1 unplaced-scaffold na na JAYWLC010000043.1 = NZ_JAYWLC010000043.1 Primary Assembly 13160 na Scaffold43_1 unplaced-scaffold na na JAYWLC010000044.1 = NZ_JAYWLC010000044.1 Primary Assembly 11379 na Scaffold44_1 unplaced-scaffold na na JAYWLC010000045.1 = NZ_JAYWLC010000045.1 Primary Assembly 9705 na Scaffold45_1 unplaced-scaffold na na JAYWLC010000046.1 = NZ_JAYWLC010000046.1 Primary Assembly 9188 na Scaffold46_1 unplaced-scaffold na na JAYWLC010000047.1 = NZ_JAYWLC010000047.1 Primary Assembly 8706 na Scaffold47_1 unplaced-scaffold na na JAYWLC010000048.1 = NZ_JAYWLC010000048.1 Primary Assembly 8140 na Scaffold48_1 unplaced-scaffold na na JAYWLC010000049.1 = NZ_JAYWLC010000049.1 Primary Assembly 7910 na Scaffold49_1 unplaced-scaffold na na JAYWLC010000050.1 = NZ_JAYWLC010000050.1 Primary Assembly 6741 na Scaffold50_1 unplaced-scaffold na na JAYWLC010000051.1 = NZ_JAYWLC010000051.1 Primary Assembly 6675 na Scaffold51_1 unplaced-scaffold na na JAYWLC010000052.1 = NZ_JAYWLC010000052.1 Primary Assembly 5696 na Scaffold52_1 unplaced-scaffold na na JAYWLC010000053.1 = NZ_JAYWLC010000053.1 Primary Assembly 5613 na Scaffold53_1 unplaced-scaffold na na JAYWLC010000054.1 = NZ_JAYWLC010000054.1 Primary Assembly 5551 na Scaffold54_1 unplaced-scaffold na na JAYWLC010000055.1 = NZ_JAYWLC010000055.1 Primary Assembly 5373 na Scaffold55_1 unplaced-scaffold na na JAYWLC010000056.1 = NZ_JAYWLC010000056.1 Primary Assembly 4972 na Scaffold56_1 unplaced-scaffold na na JAYWLC010000057.1 = NZ_JAYWLC010000057.1 Primary Assembly 4764 na Scaffold57_1 unplaced-scaffold na na JAYWLC010000058.1 = NZ_JAYWLC010000058.1 Primary Assembly 3906 na Scaffold58_1 unplaced-scaffold na na JAYWLC010000059.1 = NZ_JAYWLC010000059.1 Primary Assembly 3288 na Scaffold59_1 unplaced-scaffold na na JAYWLC010000060.1 = NZ_JAYWLC010000060.1 Primary Assembly 3256 na Scaffold60_1 unplaced-scaffold na na JAYWLC010000061.1 = NZ_JAYWLC010000061.1 Primary Assembly 3002 na Scaffold61_1 unplaced-scaffold na na JAYWLC010000062.1 = NZ_JAYWLC010000062.1 Primary Assembly 2603 na Scaffold62_1 unplaced-scaffold na na JAYWLC010000063.1 = NZ_JAYWLC010000063.1 Primary Assembly 2236 na Scaffold63_1 unplaced-scaffold na na JAYWLC010000064.1 = NZ_JAYWLC010000064.1 Primary Assembly 2233 na Scaffold64_1 unplaced-scaffold na na JAYWLC010000065.1 = NZ_JAYWLC010000065.1 Primary Assembly 1959 na Scaffold65_1 unplaced-scaffold na na JAYWLC010000066.1 = NZ_JAYWLC010000066.1 Primary Assembly 1834 na Scaffold66_1 unplaced-scaffold na na JAYWLC010000067.1 = NZ_JAYWLC010000067.1 Primary Assembly 1729 na Scaffold67_1 unplaced-scaffold na na JAYWLC010000068.1 = NZ_JAYWLC010000068.1 Primary Assembly 1468 na Scaffold68_1 unplaced-scaffold na na JAYWLC010000069.1 = NZ_JAYWLC010000069.1 Primary Assembly 1378 na Scaffold69_1 unplaced-scaffold na na JAYWLC010000070.1 = NZ_JAYWLC010000070.1 Primary Assembly 1373 na Scaffold70_1 unplaced-scaffold na na JAYWLC010000071.1 = NZ_JAYWLC010000071.1 Primary Assembly 1358 na Scaffold71_1 unplaced-scaffold na na JAYWLC010000072.1 = NZ_JAYWLC010000072.1 Primary Assembly 1286 na Scaffold72_1 unplaced-scaffold na na JAYWLC010000073.1 = NZ_JAYWLC010000073.1 Primary Assembly 1233 na Scaffold73_1 unplaced-scaffold na na JAYWLC010000074.1 = NZ_JAYWLC010000074.1 Primary Assembly 1209 na Scaffold74_1 unplaced-scaffold na na JAYWLC010000075.1 = NZ_JAYWLC010000075.1 Primary Assembly 1174 na Scaffold75_1 unplaced-scaffold na na JAYWLC010000076.1 = NZ_JAYWLC010000076.1 Primary Assembly 1161 na Scaffold76_1 unplaced-scaffold na na JAYWLC010000077.1 = NZ_JAYWLC010000077.1 Primary Assembly 1103 na Scaffold77_1 unplaced-scaffold na na JAYWLC010000078.1 = NZ_JAYWLC010000078.1 Primary Assembly 1066 na Scaffold78_1 unplaced-scaffold na na JAYWLC010000079.1 = NZ_JAYWLC010000079.1 Primary Assembly 1042 na Scaffold79_1 unplaced-scaffold na na JAYWLC010000080.1 = NZ_JAYWLC010000080.1 Primary Assembly 956 na Scaffold80_1 unplaced-scaffold na na JAYWLC010000081.1 = NZ_JAYWLC010000081.1 Primary Assembly 897 na Scaffold81_1 unplaced-scaffold na na JAYWLC010000082.1 = NZ_JAYWLC010000082.1 Primary Assembly 831 na Scaffold82_1 unplaced-scaffold na na JAYWLC010000083.1 = NZ_JAYWLC010000083.1 Primary Assembly 763 na Scaffold83_1 unplaced-scaffold na na JAYWLC010000084.1 = NZ_JAYWLC010000084.1 Primary Assembly 762 na Scaffold84_1 unplaced-scaffold na na JAYWLC010000085.1 = NZ_JAYWLC010000085.1 Primary Assembly 744 na Scaffold85_1 unplaced-scaffold na na JAYWLC010000086.1 = NZ_JAYWLC010000086.1 Primary Assembly 689 na Scaffold86_1 unplaced-scaffold na na JAYWLC010000087.1 = NZ_JAYWLC010000087.1 Primary Assembly 678 na Scaffold87_1 unplaced-scaffold na na JAYWLC010000088.1 = NZ_JAYWLC010000088.1 Primary Assembly 372 na Scaffold87_2 unplaced-scaffold na na JAYWLC010000089.1 = NZ_JAYWLC010000089.1 Primary Assembly 278 na Scaffold88_1 unplaced-scaffold na na JAYWLC010000090.1 = NZ_JAYWLC010000090.1 Primary Assembly 627 na Scaffold89_1 unplaced-scaffold na na JAYWLC010000091.1 = NZ_JAYWLC010000091.1 Primary Assembly 581 na Scaffold90_1 unplaced-scaffold na na JAYWLC010000092.1 = NZ_JAYWLC010000092.1 Primary Assembly 580 na Scaffold91_1 unplaced-scaffold na na JAYWLC010000093.1 = NZ_JAYWLC010000093.1 Primary Assembly 559 na Scaffold92_1 unplaced-scaffold na na JAYWLC010000094.1 = NZ_JAYWLC010000094.1 Primary Assembly 558 na Scaffold93_1 unplaced-scaffold na na JAYWLC010000095.1 = NZ_JAYWLC010000095.1 Primary Assembly 557 na Scaffold94_1 unplaced-scaffold na na JAYWLC010000096.1 = NZ_JAYWLC010000096.1 Primary Assembly 546 na Scaffold95_1 unplaced-scaffold na na JAYWLC010000097.1 = NZ_JAYWLC010000097.1 Primary Assembly 535 na Scaffold96_1 unplaced-scaffold na na JAYWLC010000098.1 = NZ_JAYWLC010000098.1 Primary Assembly 535 na Scaffold97_1 unplaced-scaffold na na JAYWLC010000099.1 = NZ_JAYWLC010000099.1 Primary Assembly 531 na Scaffold98_1 unplaced-scaffold na na JAYWLC010000100.1 = NZ_JAYWLC010000100.1 Primary Assembly 514 na Scaffold99_1 unplaced-scaffold na na JAYWLC010000101.1 = NZ_JAYWLC010000101.1 Primary Assembly 504 na Scaffold100_1 unplaced-scaffold na na JAYWLC010000102.1 = NZ_JAYWLC010000102.1 Primary Assembly 504 na