# Assembly name: ASM4054522v1 # Organism name: Streptococcus rupicaprae (firmicutes) # Infraspecific name: strain=DSM 28303 # Taxid: 759619 # BioSample: SAMN41513484 # BioProject: PRJNA1115579 # Submitter: DOE Joint Genome Institute # Date: 2024-07-08 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBEPLO01 # Assembly method: SPAdes v. 3.15.0 # Expected final version: no # Genome coverage: 486.0x # Sequencing technology: Illumina # RefSeq category: Reference Genome # GenBank assembly accession: GCA_040545225.1 # RefSeq assembly accession: GCF_040545225.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_040545245.1 GCF_040545245.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Ga0480211_01 unplaced-scaffold na na JBEPLO010000001.1 = NZ_JBEPLO010000001.1 Primary Assembly 174377 na Ga0480211_02 unplaced-scaffold na na JBEPLO010000002.1 = NZ_JBEPLO010000002.1 Primary Assembly 165904 na Ga0480211_03 unplaced-scaffold na na JBEPLO010000003.1 = NZ_JBEPLO010000003.1 Primary Assembly 144255 na Ga0480211_04 unplaced-scaffold na na JBEPLO010000004.1 = NZ_JBEPLO010000004.1 Primary Assembly 132643 na Ga0480211_05 unplaced-scaffold na na JBEPLO010000005.1 = NZ_JBEPLO010000005.1 Primary Assembly 107385 na Ga0480211_06 unplaced-scaffold na na JBEPLO010000006.1 = NZ_JBEPLO010000006.1 Primary Assembly 101676 na Ga0480211_07 unplaced-scaffold na na JBEPLO010000007.1 = NZ_JBEPLO010000007.1 Primary Assembly 100614 na Ga0480211_08 unplaced-scaffold na na JBEPLO010000008.1 = NZ_JBEPLO010000008.1 Primary Assembly 96266 na Ga0480211_09 unplaced-scaffold na na JBEPLO010000009.1 = NZ_JBEPLO010000009.1 Primary Assembly 95159 na Ga0480211_10 unplaced-scaffold na na JBEPLO010000010.1 = NZ_JBEPLO010000010.1 Primary Assembly 82129 na Ga0480211_11 unplaced-scaffold na na JBEPLO010000011.1 = NZ_JBEPLO010000011.1 Primary Assembly 80268 na Ga0480211_12 unplaced-scaffold na na JBEPLO010000012.1 = NZ_JBEPLO010000012.1 Primary Assembly 80265 na Ga0480211_13 unplaced-scaffold na na JBEPLO010000013.1 = NZ_JBEPLO010000013.1 Primary Assembly 71676 na Ga0480211_14 unplaced-scaffold na na JBEPLO010000014.1 = NZ_JBEPLO010000014.1 Primary Assembly 69981 na Ga0480211_15 unplaced-scaffold na na JBEPLO010000015.1 = NZ_JBEPLO010000015.1 Primary Assembly 65599 na Ga0480211_16 unplaced-scaffold na na JBEPLO010000016.1 = NZ_JBEPLO010000016.1 Primary Assembly 57508 na Ga0480211_17 unplaced-scaffold na na JBEPLO010000017.1 = NZ_JBEPLO010000017.1 Primary Assembly 56741 na Ga0480211_18 unplaced-scaffold na na JBEPLO010000018.1 = NZ_JBEPLO010000018.1 Primary Assembly 56310 na Ga0480211_19 unplaced-scaffold na na JBEPLO010000019.1 = NZ_JBEPLO010000019.1 Primary Assembly 55013 na Ga0480211_20 unplaced-scaffold na na JBEPLO010000020.1 = NZ_JBEPLO010000020.1 Primary Assembly 49762 na Ga0480211_21 unplaced-scaffold na na JBEPLO010000021.1 = NZ_JBEPLO010000021.1 Primary Assembly 43735 na Ga0480211_22 unplaced-scaffold na na JBEPLO010000022.1 = NZ_JBEPLO010000022.1 Primary Assembly 43380 na Ga0480211_23 unplaced-scaffold na na JBEPLO010000023.1 = NZ_JBEPLO010000023.1 Primary Assembly 39526 na Ga0480211_24 unplaced-scaffold na na JBEPLO010000024.1 = NZ_JBEPLO010000024.1 Primary Assembly 38809 na Ga0480211_25 unplaced-scaffold na na JBEPLO010000025.1 = NZ_JBEPLO010000025.1 Primary Assembly 36870 na Ga0480211_26 unplaced-scaffold na na JBEPLO010000026.1 = NZ_JBEPLO010000026.1 Primary Assembly 33050 na Ga0480211_27 unplaced-scaffold na na JBEPLO010000027.1 = NZ_JBEPLO010000027.1 Primary Assembly 32906 na Ga0480211_28 unplaced-scaffold na na JBEPLO010000028.1 = NZ_JBEPLO010000028.1 Primary Assembly 31550 na Ga0480211_29 unplaced-scaffold na na JBEPLO010000029.1 = NZ_JBEPLO010000029.1 Primary Assembly 29038 na Ga0480211_30 unplaced-scaffold na na JBEPLO010000030.1 = NZ_JBEPLO010000030.1 Primary Assembly 25290 na Ga0480211_31 unplaced-scaffold na na JBEPLO010000031.1 = NZ_JBEPLO010000031.1 Primary Assembly 25210 na Ga0480211_32 unplaced-scaffold na na JBEPLO010000032.1 = NZ_JBEPLO010000032.1 Primary Assembly 24304 na Ga0480211_33 unplaced-scaffold na na JBEPLO010000033.1 = NZ_JBEPLO010000033.1 Primary Assembly 23480 na Ga0480211_34 unplaced-scaffold na na JBEPLO010000034.1 = NZ_JBEPLO010000034.1 Primary Assembly 22757 na Ga0480211_35 unplaced-scaffold na na JBEPLO010000035.1 = NZ_JBEPLO010000035.1 Primary Assembly 20938 na Ga0480211_36 unplaced-scaffold na na JBEPLO010000036.1 = NZ_JBEPLO010000036.1 Primary Assembly 16996 na Ga0480211_37 unplaced-scaffold na na JBEPLO010000037.1 = NZ_JBEPLO010000037.1 Primary Assembly 16069 na Ga0480211_38 unplaced-scaffold na na JBEPLO010000038.1 = NZ_JBEPLO010000038.1 Primary Assembly 14957 na Ga0480211_39 unplaced-scaffold na na JBEPLO010000039.1 = NZ_JBEPLO010000039.1 Primary Assembly 14852 na Ga0480211_40 unplaced-scaffold na na JBEPLO010000040.1 = NZ_JBEPLO010000040.1 Primary Assembly 14448 na Ga0480211_41 unplaced-scaffold na na JBEPLO010000041.1 = NZ_JBEPLO010000041.1 Primary Assembly 13873 na Ga0480211_42 unplaced-scaffold na na JBEPLO010000042.1 = NZ_JBEPLO010000042.1 Primary Assembly 12554 na Ga0480211_43 unplaced-scaffold na na JBEPLO010000043.1 = NZ_JBEPLO010000043.1 Primary Assembly 11006 na Ga0480211_44 unplaced-scaffold na na JBEPLO010000044.1 = NZ_JBEPLO010000044.1 Primary Assembly 8957 na Ga0480211_45 unplaced-scaffold na na JBEPLO010000045.1 = NZ_JBEPLO010000045.1 Primary Assembly 7697 na Ga0480211_46 unplaced-scaffold na na JBEPLO010000046.1 = NZ_JBEPLO010000046.1 Primary Assembly 5484 na Ga0480211_47 unplaced-scaffold na na JBEPLO010000047.1 = NZ_JBEPLO010000047.1 Primary Assembly 5433 na Ga0480211_48 unplaced-scaffold na na JBEPLO010000048.1 = NZ_JBEPLO010000048.1 Primary Assembly 5084 na Ga0480211_49 unplaced-scaffold na na JBEPLO010000049.1 = NZ_JBEPLO010000049.1 Primary Assembly 4828 na Ga0480211_50 unplaced-scaffold na na JBEPLO010000050.1 = NZ_JBEPLO010000050.1 Primary Assembly 3733 na Ga0480211_51 unplaced-scaffold na na JBEPLO010000051.1 = NZ_JBEPLO010000051.1 Primary Assembly 3373 na Ga0480211_52 unplaced-scaffold na na JBEPLO010000052.1 = NZ_JBEPLO010000052.1 Primary Assembly 3141 na Ga0480211_53 unplaced-scaffold na na JBEPLO010000053.1 = NZ_JBEPLO010000053.1 Primary Assembly 2445 na Ga0480211_54 unplaced-scaffold na na JBEPLO010000054.1 = NZ_JBEPLO010000054.1 Primary Assembly 2035 na Ga0480211_55 unplaced-scaffold na na JBEPLO010000055.1 = NZ_JBEPLO010000055.1 Primary Assembly 1916 na Ga0480211_56 unplaced-scaffold na na JBEPLO010000056.1 = NZ_JBEPLO010000056.1 Primary Assembly 1620 na Ga0480211_57 unplaced-scaffold na na JBEPLO010000057.1 = NZ_JBEPLO010000057.1 Primary Assembly 1224 na Ga0480211_58 unplaced-scaffold na na JBEPLO010000058.1 = NZ_JBEPLO010000058.1 Primary Assembly 1170 na Ga0480211_59 unplaced-scaffold na na JBEPLO010000059.1 = NZ_JBEPLO010000059.1 Primary Assembly 1128 na Ga0480211_60 unplaced-scaffold na na JBEPLO010000060.1 = NZ_JBEPLO010000060.1 Primary Assembly 1028 na