# Assembly name: ASM4098444v1 # Organism name: Streptococcus handemini (firmicutes) # Infraspecific name: strain=ZJ93 # Taxid: 3161188 # BioSample: SAMN41772307 # BioProject: PRJNA1122080 # Submitter: Chinese Center for Disease Control and Prevention # Date: 2024-07-31 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBFRYH01 # Assembly method: SOAPdenovo v. 2.04 # Expected final version: yes # Genome coverage: 433.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_040984445.1 # RefSeq assembly accession: GCF_040984445.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_040984455.1 GCF_040984455.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1_1 unplaced-scaffold na na JBFRYH010000001.1 = NZ_JBFRYH010000001.1 Primary Assembly 89874 na Scaffold2_1 unplaced-scaffold na na JBFRYH010000002.1 = NZ_JBFRYH010000002.1 Primary Assembly 63218 na Scaffold3_1 unplaced-scaffold na na JBFRYH010000003.1 = NZ_JBFRYH010000003.1 Primary Assembly 61561 na Scaffold4_1 unplaced-scaffold na na JBFRYH010000004.1 = NZ_JBFRYH010000004.1 Primary Assembly 60728 na Scaffold5_1 unplaced-scaffold na na JBFRYH010000005.1 = NZ_JBFRYH010000005.1 Primary Assembly 58792 na Scaffold6_1 unplaced-scaffold na na JBFRYH010000006.1 = NZ_JBFRYH010000006.1 Primary Assembly 54802 na Scaffold7_1 unplaced-scaffold na na JBFRYH010000007.1 = NZ_JBFRYH010000007.1 Primary Assembly 47403 na Scaffold8_1 unplaced-scaffold na na JBFRYH010000008.1 = NZ_JBFRYH010000008.1 Primary Assembly 44617 na Scaffold9_1 unplaced-scaffold na na JBFRYH010000009.1 = NZ_JBFRYH010000009.1 Primary Assembly 44085 na Scaffold10_1 unplaced-scaffold na na JBFRYH010000010.1 = NZ_JBFRYH010000010.1 Primary Assembly 43026 na Scaffold11_1 unplaced-scaffold na na JBFRYH010000011.1 = NZ_JBFRYH010000011.1 Primary Assembly 40190 na Scaffold12_1 unplaced-scaffold na na JBFRYH010000012.1 = NZ_JBFRYH010000012.1 Primary Assembly 38233 na Scaffold13_1 unplaced-scaffold na na JBFRYH010000013.1 = NZ_JBFRYH010000013.1 Primary Assembly 37417 na Scaffold14_1 unplaced-scaffold na na JBFRYH010000014.1 = NZ_JBFRYH010000014.1 Primary Assembly 37294 na Scaffold15_1 unplaced-scaffold na na JBFRYH010000015.1 = NZ_JBFRYH010000015.1 Primary Assembly 37233 na Scaffold16_1 unplaced-scaffold na na JBFRYH010000016.1 = NZ_JBFRYH010000016.1 Primary Assembly 36996 na Scaffold17_1 unplaced-scaffold na na JBFRYH010000017.1 = NZ_JBFRYH010000017.1 Primary Assembly 36632 na Scaffold18_1 unplaced-scaffold na na JBFRYH010000018.1 = NZ_JBFRYH010000018.1 Primary Assembly 33663 na Scaffold19_1 unplaced-scaffold na na JBFRYH010000019.1 = NZ_JBFRYH010000019.1 Primary Assembly 32928 na Scaffold20_1 unplaced-scaffold na na JBFRYH010000020.1 = NZ_JBFRYH010000020.1 Primary Assembly 32381 na Scaffold21_1 unplaced-scaffold na na JBFRYH010000021.1 = NZ_JBFRYH010000021.1 Primary Assembly 31243 na Scaffold22_1 unplaced-scaffold na na JBFRYH010000022.1 = NZ_JBFRYH010000022.1 Primary Assembly 31218 na Scaffold23_1 unplaced-scaffold na na JBFRYH010000023.1 = NZ_JBFRYH010000023.1 Primary Assembly 30256 na Scaffold24_1 unplaced-scaffold na na JBFRYH010000024.1 = NZ_JBFRYH010000024.1 Primary Assembly 29317 na Scaffold25_1 unplaced-scaffold na na JBFRYH010000025.1 = NZ_JBFRYH010000025.1 Primary Assembly 28792 na Scaffold26_1 unplaced-scaffold na na JBFRYH010000026.1 = NZ_JBFRYH010000026.1 Primary Assembly 24416 na Scaffold27_1 unplaced-scaffold na na JBFRYH010000027.1 = NZ_JBFRYH010000027.1 Primary Assembly 24369 na Scaffold28_1 unplaced-scaffold na na JBFRYH010000028.1 = NZ_JBFRYH010000028.1 Primary Assembly 24341 na Scaffold29_1 unplaced-scaffold na na JBFRYH010000029.1 = NZ_JBFRYH010000029.1 Primary Assembly 23834 na Scaffold30_1 unplaced-scaffold na na JBFRYH010000030.1 = NZ_JBFRYH010000030.1 Primary Assembly 23811 na Scaffold31_1 unplaced-scaffold na na JBFRYH010000031.1 = NZ_JBFRYH010000031.1 Primary Assembly 23484 na Scaffold32_1 unplaced-scaffold na na JBFRYH010000032.1 = NZ_JBFRYH010000032.1 Primary Assembly 867 na Scaffold32_2 unplaced-scaffold na na JBFRYH010000033.1 = NZ_JBFRYH010000033.1 Primary Assembly 21793 na Scaffold33_1 unplaced-scaffold na na JBFRYH010000034.1 = NZ_JBFRYH010000034.1 Primary Assembly 22119 na Scaffold34_1 unplaced-scaffold na na JBFRYH010000035.1 = NZ_JBFRYH010000035.1 Primary Assembly 21898 na Scaffold35_1 unplaced-scaffold na na JBFRYH010000036.1 = NZ_JBFRYH010000036.1 Primary Assembly 21731 na Scaffold36_1 unplaced-scaffold na na JBFRYH010000037.1 = NZ_JBFRYH010000037.1 Primary Assembly 21127 na Scaffold37_1 unplaced-scaffold na na JBFRYH010000038.1 = NZ_JBFRYH010000038.1 Primary Assembly 21050 na Scaffold38_1 unplaced-scaffold na na JBFRYH010000039.1 = NZ_JBFRYH010000039.1 Primary Assembly 20986 na Scaffold39_1 unplaced-scaffold na na JBFRYH010000040.1 = NZ_JBFRYH010000040.1 Primary Assembly 20273 na Scaffold40_1 unplaced-scaffold na na JBFRYH010000041.1 = NZ_JBFRYH010000041.1 Primary Assembly 20034 na Scaffold41_1 unplaced-scaffold na na JBFRYH010000042.1 = NZ_JBFRYH010000042.1 Primary Assembly 19848 na Scaffold42_1 unplaced-scaffold na na JBFRYH010000043.1 = NZ_JBFRYH010000043.1 Primary Assembly 19426 na Scaffold43_1 unplaced-scaffold na na JBFRYH010000044.1 = NZ_JBFRYH010000044.1 Primary Assembly 18997 na Scaffold44_1 unplaced-scaffold na na JBFRYH010000045.1 = NZ_JBFRYH010000045.1 Primary Assembly 18720 na Scaffold45_1 unplaced-scaffold na na JBFRYH010000046.1 = NZ_JBFRYH010000046.1 Primary Assembly 18549 na Scaffold46_1 unplaced-scaffold na na JBFRYH010000047.1 = NZ_JBFRYH010000047.1 Primary Assembly 18530 na Scaffold47_1 unplaced-scaffold na na JBFRYH010000048.1 = NZ_JBFRYH010000048.1 Primary Assembly 17782 na Scaffold48_1 unplaced-scaffold na na JBFRYH010000049.1 = NZ_JBFRYH010000049.1 Primary Assembly 17672 na Scaffold49_1 unplaced-scaffold na na JBFRYH010000050.1 = NZ_JBFRYH010000050.1 Primary Assembly 17495 na Scaffold50_1 unplaced-scaffold na na JBFRYH010000051.1 = NZ_JBFRYH010000051.1 Primary Assembly 16712 na Scaffold51_1 unplaced-scaffold na na JBFRYH010000052.1 = NZ_JBFRYH010000052.1 Primary Assembly 16693 na Scaffold52_1 unplaced-scaffold na na JBFRYH010000053.1 = NZ_JBFRYH010000053.1 Primary Assembly 16210 na Scaffold53_1 unplaced-scaffold na na JBFRYH010000054.1 = NZ_JBFRYH010000054.1 Primary Assembly 15715 na Scaffold54_1 unplaced-scaffold na na JBFRYH010000055.1 = NZ_JBFRYH010000055.1 Primary Assembly 14980 na Scaffold55_1 unplaced-scaffold na na JBFRYH010000056.1 = NZ_JBFRYH010000056.1 Primary Assembly 14783 na Scaffold56_1 unplaced-scaffold na na JBFRYH010000057.1 = NZ_JBFRYH010000057.1 Primary Assembly 14739 na Scaffold57_1 unplaced-scaffold na na JBFRYH010000058.1 = NZ_JBFRYH010000058.1 Primary Assembly 13463 na Scaffold58_1 unplaced-scaffold na na JBFRYH010000059.1 = NZ_JBFRYH010000059.1 Primary Assembly 12467 na Scaffold59_1 unplaced-scaffold na na JBFRYH010000060.1 = NZ_JBFRYH010000060.1 Primary Assembly 12236 na Scaffold60_1 unplaced-scaffold na na JBFRYH010000061.1 = NZ_JBFRYH010000061.1 Primary Assembly 12217 na Scaffold61_1 unplaced-scaffold na na JBFRYH010000062.1 = NZ_JBFRYH010000062.1 Primary Assembly 12180 na Scaffold62_1 unplaced-scaffold na na JBFRYH010000063.1 = NZ_JBFRYH010000063.1 Primary Assembly 11942 na Scaffold63_1 unplaced-scaffold na na JBFRYH010000064.1 = NZ_JBFRYH010000064.1 Primary Assembly 11517 na Scaffold64_1 unplaced-scaffold na na JBFRYH010000065.1 = NZ_JBFRYH010000065.1 Primary Assembly 9987 na Scaffold65_1 unplaced-scaffold na na JBFRYH010000066.1 = NZ_JBFRYH010000066.1 Primary Assembly 9965 na Scaffold66_1 unplaced-scaffold na na JBFRYH010000067.1 = NZ_JBFRYH010000067.1 Primary Assembly 9882 na Scaffold67_1 unplaced-scaffold na na JBFRYH010000068.1 = NZ_JBFRYH010000068.1 Primary Assembly 9233 na Scaffold68_1 unplaced-scaffold na na JBFRYH010000069.1 = NZ_JBFRYH010000069.1 Primary Assembly 9227 na Scaffold69_1 unplaced-scaffold na na JBFRYH010000070.1 = NZ_JBFRYH010000070.1 Primary Assembly 8964 na Scaffold70_1 unplaced-scaffold na na JBFRYH010000071.1 = NZ_JBFRYH010000071.1 Primary Assembly 8821 na Scaffold71_1 unplaced-scaffold na na JBFRYH010000072.1 = NZ_JBFRYH010000072.1 Primary Assembly 8484 na Scaffold72_1 unplaced-scaffold na na JBFRYH010000073.1 = NZ_JBFRYH010000073.1 Primary Assembly 8442 na Scaffold73_1 unplaced-scaffold na na JBFRYH010000074.1 = NZ_JBFRYH010000074.1 Primary Assembly 8422 na Scaffold74_1 unplaced-scaffold na na JBFRYH010000075.1 = NZ_JBFRYH010000075.1 Primary Assembly 8287 na Scaffold75_1 unplaced-scaffold na na JBFRYH010000076.1 = NZ_JBFRYH010000076.1 Primary Assembly 8262 na Scaffold76_1 unplaced-scaffold na na JBFRYH010000077.1 = NZ_JBFRYH010000077.1 Primary Assembly 8120 na Scaffold77_1 unplaced-scaffold na na JBFRYH010000078.1 = NZ_JBFRYH010000078.1 Primary Assembly 8109 na Scaffold78_1 unplaced-scaffold na na JBFRYH010000079.1 = NZ_JBFRYH010000079.1 Primary Assembly 8041 na Scaffold79_1 unplaced-scaffold na na JBFRYH010000080.1 = NZ_JBFRYH010000080.1 Primary Assembly 7991 na Scaffold80_1 unplaced-scaffold na na JBFRYH010000081.1 = NZ_JBFRYH010000081.1 Primary Assembly 405 na Scaffold80_2 unplaced-scaffold na na JBFRYH010000082.1 = NZ_JBFRYH010000082.1 Primary Assembly 7441 na Scaffold81_1 unplaced-scaffold na na JBFRYH010000083.1 = NZ_JBFRYH010000083.1 Primary Assembly 7511 na Scaffold82_1 unplaced-scaffold na na JBFRYH010000084.1 = NZ_JBFRYH010000084.1 Primary Assembly 7458 na Scaffold83_1 unplaced-scaffold na na JBFRYH010000085.1 = NZ_JBFRYH010000085.1 Primary Assembly 7282 na Scaffold84_1 unplaced-scaffold na na JBFRYH010000086.1 = NZ_JBFRYH010000086.1 Primary Assembly 6950 na Scaffold85_1 unplaced-scaffold na na JBFRYH010000087.1 = NZ_JBFRYH010000087.1 Primary Assembly 6762 na Scaffold86_1 unplaced-scaffold na na JBFRYH010000088.1 = NZ_JBFRYH010000088.1 Primary Assembly 6628 na Scaffold87_1 unplaced-scaffold na na JBFRYH010000089.1 = NZ_JBFRYH010000089.1 Primary Assembly 6288 na Scaffold88_1 unplaced-scaffold na na JBFRYH010000090.1 = NZ_JBFRYH010000090.1 Primary Assembly 6106 na Scaffold89_1 unplaced-scaffold na na JBFRYH010000091.1 = NZ_JBFRYH010000091.1 Primary Assembly 6039 na Scaffold90_1 unplaced-scaffold na na JBFRYH010000092.1 = NZ_JBFRYH010000092.1 Primary Assembly 5914 na Scaffold91_1 unplaced-scaffold na na JBFRYH010000093.1 = NZ_JBFRYH010000093.1 Primary Assembly 5884 na Scaffold92_1 unplaced-scaffold na na JBFRYH010000094.1 = NZ_JBFRYH010000094.1 Primary Assembly 5545 na Scaffold93_1 unplaced-scaffold na na JBFRYH010000095.1 = NZ_JBFRYH010000095.1 Primary Assembly 5523 na Scaffold94_1 unplaced-scaffold na na JBFRYH010000096.1 = NZ_JBFRYH010000096.1 Primary Assembly 5478 na Scaffold95_1 unplaced-scaffold na na JBFRYH010000097.1 = NZ_JBFRYH010000097.1 Primary Assembly 4985 na Scaffold96_1 unplaced-scaffold na na JBFRYH010000098.1 = NZ_JBFRYH010000098.1 Primary Assembly 4935 na Scaffold97_1 unplaced-scaffold na na JBFRYH010000099.1 = NZ_JBFRYH010000099.1 Primary Assembly 4623 na Scaffold98_1 unplaced-scaffold na na JBFRYH010000100.1 = NZ_JBFRYH010000100.1 Primary Assembly 4555 na Scaffold99_1 unplaced-scaffold na na JBFRYH010000101.1 = NZ_JBFRYH010000101.1 Primary Assembly 4249 na Scaffold100_1 unplaced-scaffold na na JBFRYH010000102.1 = NZ_JBFRYH010000102.1 Primary Assembly 3928 na Scaffold101_1 unplaced-scaffold na na JBFRYH010000103.1 = NZ_JBFRYH010000103.1 Primary Assembly 3704 na Scaffold102_1 unplaced-scaffold na na JBFRYH010000104.1 = NZ_JBFRYH010000104.1 Primary Assembly 3487 na Scaffold103_1 unplaced-scaffold na na JBFRYH010000105.1 = NZ_JBFRYH010000105.1 Primary Assembly 3463 na Scaffold104_1 unplaced-scaffold na na JBFRYH010000106.1 = NZ_JBFRYH010000106.1 Primary Assembly 3358 na Scaffold105_1 unplaced-scaffold na na JBFRYH010000107.1 = NZ_JBFRYH010000107.1 Primary Assembly 3277 na Scaffold106_1 unplaced-scaffold na na JBFRYH010000108.1 = NZ_JBFRYH010000108.1 Primary Assembly 3024 na Scaffold107_1 unplaced-scaffold na na JBFRYH010000109.1 = NZ_JBFRYH010000109.1 Primary Assembly 2999 na Scaffold108_1 unplaced-scaffold na na JBFRYH010000110.1 = NZ_JBFRYH010000110.1 Primary Assembly 2702 na Scaffold109_1 unplaced-scaffold na na JBFRYH010000111.1 = NZ_JBFRYH010000111.1 Primary Assembly 2622 na Scaffold110_1 unplaced-scaffold na na JBFRYH010000112.1 = NZ_JBFRYH010000112.1 Primary Assembly 2544 na Scaffold111_1 unplaced-scaffold na na JBFRYH010000113.1 = NZ_JBFRYH010000113.1 Primary Assembly 2440 na Scaffold112_1 unplaced-scaffold na na JBFRYH010000114.1 = NZ_JBFRYH010000114.1 Primary Assembly 1759 na Scaffold113_1 unplaced-scaffold na na JBFRYH010000115.1 = NZ_JBFRYH010000115.1 Primary Assembly 1687 na Scaffold114_1 unplaced-scaffold na na JBFRYH010000116.1 = NZ_JBFRYH010000116.1 Primary Assembly 1654 na Scaffold115_1 unplaced-scaffold na na JBFRYH010000117.1 = NZ_JBFRYH010000117.1 Primary Assembly 1541 na Scaffold116_1 unplaced-scaffold na na JBFRYH010000118.1 = NZ_JBFRYH010000118.1 Primary Assembly 1440 na Scaffold117_1 unplaced-scaffold na na JBFRYH010000119.1 = NZ_JBFRYH010000119.1 Primary Assembly 1308 na Scaffold118_1 unplaced-scaffold na na JBFRYH010000120.1 = NZ_JBFRYH010000120.1 Primary Assembly 1285 na Scaffold119_1 unplaced-scaffold na na JBFRYH010000121.1 = NZ_JBFRYH010000121.1 Primary Assembly 1234 na Scaffold120_1 unplaced-scaffold na na JBFRYH010000122.1 = NZ_JBFRYH010000122.1 Primary Assembly 1228 na Scaffold121_1 unplaced-scaffold na na JBFRYH010000123.1 = NZ_JBFRYH010000123.1 Primary Assembly 1197 na Scaffold122_1 unplaced-scaffold na na JBFRYH010000124.1 = NZ_JBFRYH010000124.1 Primary Assembly 1099 na Scaffold123_1 unplaced-scaffold na na JBFRYH010000125.1 = NZ_JBFRYH010000125.1 Primary Assembly 1056 na Scaffold124_1 unplaced-scaffold na na JBFRYH010000126.1 = NZ_JBFRYH010000126.1 Primary Assembly 1008 na Scaffold125_1 unplaced-scaffold na na JBFRYH010000127.1 = NZ_JBFRYH010000127.1 Primary Assembly 956 na Scaffold126_1 unplaced-scaffold na na JBFRYH010000128.1 = NZ_JBFRYH010000128.1 Primary Assembly 955 na Scaffold127_1 unplaced-scaffold na na JBFRYH010000129.1 = NZ_JBFRYH010000129.1 Primary Assembly 847 na Scaffold128_1 unplaced-scaffold na na JBFRYH010000130.1 = NZ_JBFRYH010000130.1 Primary Assembly 816 na Scaffold129_1 unplaced-scaffold na na JBFRYH010000131.1 = NZ_JBFRYH010000131.1 Primary Assembly 737 na Scaffold130_1 unplaced-scaffold na na JBFRYH010000132.1 = NZ_JBFRYH010000132.1 Primary Assembly 558 na Scaffold131_1 unplaced-scaffold na na JBFRYH010000133.1 = NZ_JBFRYH010000133.1 Primary Assembly 521 na