# Assembly name: ASM4264790v1 # Organism name: Amycolatopsis halotolerans (high G+C Gram-positive bacteria) # Infraspecific name: strain=CGMCC 4.7682 # Taxid: 330083 # BioSample: SAMN43282158 # BioProject: PRJNA595761 # Submitter: Institution of Microbiology, Chinese Academy of Science(WDCM) # Date: 2024-10-05 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JBHRWI01 # Assembly method: SOAPdenovo v. v2.04; SPAdes v. v3.13.0; Velvet v. v1.2.10; Platanus-b v. v1.2.0 # Expected final version: yes # Genome coverage: 62x # Sequencing technology: Illumina # RefSeq category: Reference Genome # GenBank assembly accession: GCA_042647905.1 # RefSeq assembly accession: GCF_042647905.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042647915.1 GCF_042647915.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name GCM70017789_21 unplaced-scaffold na na JBHRWI010000001.1 = NZ_JBHRWI010000001.1 Primary Assembly 154354 na GCM70017789_2 unplaced-scaffold na na JBHRWI010000002.1 = NZ_JBHRWI010000002.1 Primary Assembly 156472 na GCM70017789_94 unplaced-scaffold na na JBHRWI010000003.1 = NZ_JBHRWI010000003.1 Primary Assembly 240489 na GCM70017789_42 unplaced-scaffold na na JBHRWI010000004.1 = NZ_JBHRWI010000004.1 Primary Assembly 466985 na GCM70017789_77 unplaced-scaffold na na JBHRWI010000005.1 = NZ_JBHRWI010000005.1 Primary Assembly 139741 na GCM70017789_6 unplaced-scaffold na na JBHRWI010000006.1 = NZ_JBHRWI010000006.1 Primary Assembly 215520 na GCM70017789_97 unplaced-scaffold na na JBHRWI010000007.1 = NZ_JBHRWI010000007.1 Primary Assembly 240628 na GCM70017789_64 unplaced-scaffold na na JBHRWI010000008.1 = NZ_JBHRWI010000008.1 Primary Assembly 15009 na GCM70017789_69 unplaced-scaffold na na JBHRWI010000009.1 = NZ_JBHRWI010000009.1 Primary Assembly 775 na GCM70017789_57 unplaced-scaffold na na JBHRWI010000010.1 = NZ_JBHRWI010000010.1 Primary Assembly 5975 na GCM70017789_16 unplaced-scaffold na na JBHRWI010000011.1 = NZ_JBHRWI010000011.1 Primary Assembly 127680 na GCM70017789_52 unplaced-scaffold na na JBHRWI010000012.1 = NZ_JBHRWI010000012.1 Primary Assembly 121128 na GCM70017789_17 unplaced-scaffold na na JBHRWI010000013.1 = NZ_JBHRWI010000013.1 Primary Assembly 255713 na GCM70017789_65 unplaced-scaffold na na JBHRWI010000014.1 = NZ_JBHRWI010000014.1 Primary Assembly 88673 na GCM70017789_35 unplaced-scaffold na na JBHRWI010000015.1 = NZ_JBHRWI010000015.1 Primary Assembly 437837 na GCM70017789_61 unplaced-scaffold na na JBHRWI010000016.1 = NZ_JBHRWI010000016.1 Primary Assembly 322025 na GCM70017789_12 unplaced-scaffold na na JBHRWI010000017.1 = NZ_JBHRWI010000017.1 Primary Assembly 50415 na GCM70017789_51 unplaced-scaffold na na JBHRWI010000018.1 = NZ_JBHRWI010000018.1 Primary Assembly 9307 na GCM70017789_55 unplaced-scaffold na na JBHRWI010000019.1 = NZ_JBHRWI010000019.1 Primary Assembly 205474 na GCM70017789_54 unplaced-scaffold na na JBHRWI010000020.1 = NZ_JBHRWI010000020.1 Primary Assembly 648419 na GCM70017789_1 unplaced-scaffold na na JBHRWI010000021.1 = NZ_JBHRWI010000021.1 Primary Assembly 84864 na GCM70017789_47 unplaced-scaffold na na JBHRWI010000022.1 = NZ_JBHRWI010000022.1 Primary Assembly 356208 na GCM70017789_31 unplaced-scaffold na na JBHRWI010000023.1 = NZ_JBHRWI010000023.1 Primary Assembly 33875 na GCM70017789_33 unplaced-scaffold na na JBHRWI010000024.1 = NZ_JBHRWI010000024.1 Primary Assembly 255541 na GCM70017789_19 unplaced-scaffold na na JBHRWI010000025.1 = NZ_JBHRWI010000025.1 Primary Assembly 61899 na GCM70017789_22 unplaced-scaffold na na JBHRWI010000026.1 = NZ_JBHRWI010000026.1 Primary Assembly 76894 na GCM70017789_4 unplaced-scaffold na na JBHRWI010000027.1 = NZ_JBHRWI010000027.1 Primary Assembly 342594 na GCM70017789_36 unplaced-scaffold na na JBHRWI010000028.1 = NZ_JBHRWI010000028.1 Primary Assembly 146312 na GCM70017789_80 unplaced-scaffold na na JBHRWI010000029.1 = NZ_JBHRWI010000029.1 Primary Assembly 215941 na GCM70017789_39 unplaced-scaffold na na JBHRWI010000030.1 = NZ_JBHRWI010000030.1 Primary Assembly 383441 na GCM70017789_63 unplaced-scaffold na na JBHRWI010000031.1 = NZ_JBHRWI010000031.1 Primary Assembly 66917 na GCM70017789_11 unplaced-scaffold na na JBHRWI010000032.1 = NZ_JBHRWI010000032.1 Primary Assembly 27288 na GCM70017789_68 unplaced-scaffold na na JBHRWI010000033.1 = NZ_JBHRWI010000033.1 Primary Assembly 83139 na GCM70017789_20 unplaced-scaffold na na JBHRWI010000034.1 = NZ_JBHRWI010000034.1 Primary Assembly 1569 na GCM70017789_13 unplaced-scaffold na na JBHRWI010000035.1 = NZ_JBHRWI010000035.1 Primary Assembly 85124 na GCM70017789_24 unplaced-scaffold na na JBHRWI010000036.1 = NZ_JBHRWI010000036.1 Primary Assembly 71638 na GCM70017789_29 unplaced-scaffold na na JBHRWI010000037.1 = NZ_JBHRWI010000037.1 Primary Assembly 716 na GCM70017789_91 unplaced-scaffold na na JBHRWI010000038.1 = NZ_JBHRWI010000038.1 Primary Assembly 2870 na GCM70017789_93 unplaced-scaffold na na JBHRWI010000039.1 = NZ_JBHRWI010000039.1 Primary Assembly 202918 na GCM70017789_38 unplaced-scaffold na na JBHRWI010000040.1 = NZ_JBHRWI010000040.1 Primary Assembly 124875 na GCM70017789_75 unplaced-scaffold na na JBHRWI010000041.1 = NZ_JBHRWI010000041.1 Primary Assembly 18424 na GCM70017789_41 unplaced-scaffold na na JBHRWI010000042.1 = NZ_JBHRWI010000042.1 Primary Assembly 316385 na GCM70017789_82 unplaced-scaffold na na JBHRWI010000043.1 = NZ_JBHRWI010000043.1 Primary Assembly 220655 na GCM70017789_46 unplaced-scaffold na na JBHRWI010000044.1 = NZ_JBHRWI010000044.1 Primary Assembly 35532 na GCM70017789_60 unplaced-scaffold na na JBHRWI010000045.1 = NZ_JBHRWI010000045.1 Primary Assembly 48716 na GCM70017789_72 unplaced-scaffold na na JBHRWI010000046.1 = NZ_JBHRWI010000046.1 Primary Assembly 5362 na GCM70017789_73 unplaced-scaffold na na JBHRWI010000047.1 = NZ_JBHRWI010000047.1 Primary Assembly 959 na GCM70017789_15 unplaced-scaffold na na JBHRWI010000048.1 = NZ_JBHRWI010000048.1 Primary Assembly 56406 na GCM70017789_14 unplaced-scaffold na na JBHRWI010000049.1 = NZ_JBHRWI010000049.1 Primary Assembly 184938 na GCM70017789_37 unplaced-scaffold na na JBHRWI010000050.1 = NZ_JBHRWI010000050.1 Primary Assembly 114647 na GCM70017789_28 unplaced-scaffold na na JBHRWI010000051.1 = NZ_JBHRWI010000051.1 Primary Assembly 166058 na GCM70017789_62 unplaced-scaffold na na JBHRWI010000052.1 = NZ_JBHRWI010000052.1 Primary Assembly 86241 na GCM70017789_5 unplaced-scaffold na na JBHRWI010000053.1 = NZ_JBHRWI010000053.1 Primary Assembly 72494 na GCM70017789_83 unplaced-scaffold na na JBHRWI010000054.1 = NZ_JBHRWI010000054.1 Primary Assembly 541 na GCM70017789_32 unplaced-scaffold na na JBHRWI010000055.1 = NZ_JBHRWI010000055.1 Primary Assembly 73976 na GCM70017789_67 unplaced-scaffold na na JBHRWI010000056.1 = NZ_JBHRWI010000056.1 Primary Assembly 215083 na GCM70017789_43 unplaced-scaffold na na JBHRWI010000057.1 = NZ_JBHRWI010000057.1 Primary Assembly 44068 na GCM70017789_27 unplaced-scaffold na na JBHRWI010000058.1 = NZ_JBHRWI010000058.1 Primary Assembly 24418 na GCM70017789_10 unplaced-scaffold na na JBHRWI010000059.1 = NZ_JBHRWI010000059.1 Primary Assembly 7500 na GCM70017789_66 unplaced-scaffold na na JBHRWI010000060.1 = NZ_JBHRWI010000060.1 Primary Assembly 107232 na GCM70017789_40 unplaced-scaffold na na JBHRWI010000061.1 = NZ_JBHRWI010000061.1 Primary Assembly 153175 na GCM70017789_25 unplaced-scaffold na na JBHRWI010000062.1 = NZ_JBHRWI010000062.1 Primary Assembly 210535 na GCM70017789_50 unplaced-scaffold na na JBHRWI010000063.1 = NZ_JBHRWI010000063.1 Primary Assembly 36181 na GCM70017789_74 unplaced-scaffold na na JBHRWI010000064.1 = NZ_JBHRWI010000064.1 Primary Assembly 14340 na GCM70017789_9 unplaced-scaffold na na JBHRWI010000065.1 = NZ_JBHRWI010000065.1 Primary Assembly 696 na GCM70017789_34 unplaced-scaffold na na JBHRWI010000066.1 = NZ_JBHRWI010000066.1 Primary Assembly 100700 na GCM70017789_30 unplaced-scaffold na na JBHRWI010000067.1 = NZ_JBHRWI010000067.1 Primary Assembly 31708 na GCM70017789_92 unplaced-scaffold na na JBHRWI010000068.1 = NZ_JBHRWI010000068.1 Primary Assembly 803 na GCM70017789_71 unplaced-scaffold na na JBHRWI010000069.1 = NZ_JBHRWI010000069.1 Primary Assembly 43655 na GCM70017789_81 unplaced-scaffold na na JBHRWI010000070.1 = NZ_JBHRWI010000070.1 Primary Assembly 252293 na GCM70017789_88 unplaced-scaffold na na JBHRWI010000071.1 = NZ_JBHRWI010000071.1 Primary Assembly 35381 na GCM70017789_96 unplaced-scaffold na na JBHRWI010000072.1 = NZ_JBHRWI010000072.1 Primary Assembly 71566 na GCM70017789_49 unplaced-scaffold na na JBHRWI010000073.1 = NZ_JBHRWI010000073.1 Primary Assembly 18907 na GCM70017789_45 unplaced-scaffold na na JBHRWI010000074.1 = NZ_JBHRWI010000074.1 Primary Assembly 32386 na GCM70017789_44 unplaced-scaffold na na JBHRWI010000075.1 = NZ_JBHRWI010000075.1 Primary Assembly 42823 na GCM70017789_70 unplaced-scaffold na na JBHRWI010000076.1 = NZ_JBHRWI010000076.1 Primary Assembly 194075 na GCM70017789_18 unplaced-scaffold na na JBHRWI010000077.1 = NZ_JBHRWI010000077.1 Primary Assembly 57637 na GCM70017789_78 unplaced-scaffold na na JBHRWI010000078.1 = NZ_JBHRWI010000078.1 Primary Assembly 37211 na GCM70017789_3 unplaced-scaffold na na JBHRWI010000079.1 = NZ_JBHRWI010000079.1 Primary Assembly 114289 na GCM70017789_95 unplaced-scaffold na na JBHRWI010000080.1 = NZ_JBHRWI010000080.1 Primary Assembly 63189 na GCM70017789_23 unplaced-scaffold na na JBHRWI010000081.1 = NZ_JBHRWI010000081.1 Primary Assembly 181059 na GCM70017789_90 unplaced-scaffold na na JBHRWI010000082.1 = NZ_JBHRWI010000082.1 Primary Assembly 1502 na GCM70017789_59 unplaced-scaffold na na JBHRWI010000083.1 = NZ_JBHRWI010000083.1 Primary Assembly 1330 na GCM70017789_84 unplaced-scaffold na na JBHRWI010000084.1 = NZ_JBHRWI010000084.1 Primary Assembly 1327 na GCM70017789_79 unplaced-scaffold na na JBHRWI010000085.1 = NZ_JBHRWI010000085.1 Primary Assembly 1002 na GCM70017789_53 unplaced-scaffold na na JBHRWI010000086.1 = NZ_JBHRWI010000086.1 Primary Assembly 711 na GCM70017789_26 unplaced-scaffold na na JBHRWI010000087.1 = NZ_JBHRWI010000087.1 Primary Assembly 1167 na GCM70017789_7 unplaced-scaffold na na JBHRWI010000088.1 = NZ_JBHRWI010000088.1 Primary Assembly 768 na GCM70017789_8 unplaced-scaffold na na JBHRWI010000089.1 = NZ_JBHRWI010000089.1 Primary Assembly 1167 na GCM70017789_85 unplaced-scaffold na na JBHRWI010000090.1 = NZ_JBHRWI010000090.1 Primary Assembly 821 na