# Assembly name: ASM4266057v1 # Organism name: Nocardiopsis tropica (high G+C Gram-positive bacteria) # Infraspecific name: strain=JCM 10877 # Taxid: 109330 # BioSample: SAMN43283403 # BioProject: PRJNA595761 # Submitter: Institution of Microbiology, Chinese Academy of Science(WDCM) # Date: 2024-10-06 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JBHSUF01 # Assembly method: SOAPdenovo v. v2.04; SPAdes v. v3.13.0; Velvet v. v1.2.10; Platanus-b v. v1.2.0 # Expected final version: yes # Genome coverage: 55x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_042660575.1 # RefSeq assembly accession: GCF_042660575.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042660595.1 GCF_042660595.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name GCM70026985_75 unplaced-scaffold na na JBHSUF010000001.1 = NZ_JBHSUF010000001.1 Primary Assembly 613652 na GCM70026985_23 unplaced-scaffold na na JBHSUF010000002.1 = NZ_JBHSUF010000002.1 Primary Assembly 570985 na GCM70026985_19 unplaced-scaffold na na JBHSUF010000003.1 = NZ_JBHSUF010000003.1 Primary Assembly 461597 na GCM70026985_35 unplaced-scaffold na na JBHSUF010000004.1 = NZ_JBHSUF010000004.1 Primary Assembly 411928 na GCM70026985_45 unplaced-scaffold na na JBHSUF010000005.1 = NZ_JBHSUF010000005.1 Primary Assembly 397258 na GCM70026985_54 unplaced-scaffold na na JBHSUF010000006.1 = NZ_JBHSUF010000006.1 Primary Assembly 360612 na GCM70026985_61 unplaced-scaffold na na JBHSUF010000007.1 = NZ_JBHSUF010000007.1 Primary Assembly 348979 na GCM70026985_63 unplaced-scaffold na na JBHSUF010000008.1 = NZ_JBHSUF010000008.1 Primary Assembly 333922 na GCM70026985_76 unplaced-scaffold na na JBHSUF010000009.1 = NZ_JBHSUF010000009.1 Primary Assembly 306594 na GCM70026985_70 unplaced-scaffold na na JBHSUF010000010.1 = NZ_JBHSUF010000010.1 Primary Assembly 297129 na GCM70026985_59 unplaced-scaffold na na JBHSUF010000011.1 = NZ_JBHSUF010000011.1 Primary Assembly 291442 na GCM70026985_28 unplaced-scaffold na na JBHSUF010000012.1 = NZ_JBHSUF010000012.1 Primary Assembly 270740 na GCM70026985_21 unplaced-scaffold na na JBHSUF010000013.1 = NZ_JBHSUF010000013.1 Primary Assembly 234849 na GCM70026985_22 unplaced-scaffold na na JBHSUF010000014.1 = NZ_JBHSUF010000014.1 Primary Assembly 199879 na GCM70026985_10 unplaced-scaffold na na JBHSUF010000015.1 = NZ_JBHSUF010000015.1 Primary Assembly 164803 na GCM70026985_15 unplaced-scaffold na na JBHSUF010000016.1 = NZ_JBHSUF010000016.1 Primary Assembly 156003 na GCM70026985_67 unplaced-scaffold na na JBHSUF010000017.1 = NZ_JBHSUF010000017.1 Primary Assembly 154692 na GCM70026985_39 unplaced-scaffold na na JBHSUF010000018.1 = NZ_JBHSUF010000018.1 Primary Assembly 151665 na GCM70026985_47 unplaced-scaffold na na JBHSUF010000019.1 = NZ_JBHSUF010000019.1 Primary Assembly 149747 na GCM70026985_20 unplaced-scaffold na na JBHSUF010000020.1 = NZ_JBHSUF010000020.1 Primary Assembly 134244 na GCM70026985_73 unplaced-scaffold na na JBHSUF010000021.1 = NZ_JBHSUF010000021.1 Primary Assembly 131821 na GCM70026985_52 unplaced-scaffold na na JBHSUF010000022.1 = NZ_JBHSUF010000022.1 Primary Assembly 126385 na GCM70026985_66 unplaced-scaffold na na JBHSUF010000023.1 = NZ_JBHSUF010000023.1 Primary Assembly 124174 na GCM70026985_77 unplaced-scaffold na na JBHSUF010000024.1 = NZ_JBHSUF010000024.1 Primary Assembly 124035 na GCM70026985_9 unplaced-scaffold na na JBHSUF010000025.1 = NZ_JBHSUF010000025.1 Primary Assembly 118050 na GCM70026985_14 unplaced-scaffold na na JBHSUF010000026.1 = NZ_JBHSUF010000026.1 Primary Assembly 97591 na GCM70026985_33 unplaced-scaffold na na JBHSUF010000027.1 = NZ_JBHSUF010000027.1 Primary Assembly 94918 na GCM70026985_42 unplaced-scaffold na na JBHSUF010000028.1 = NZ_JBHSUF010000028.1 Primary Assembly 84885 na GCM70026985_50 unplaced-scaffold na na JBHSUF010000029.1 = NZ_JBHSUF010000029.1 Primary Assembly 80052 na GCM70026985_64 unplaced-scaffold na na JBHSUF010000030.1 = NZ_JBHSUF010000030.1 Primary Assembly 78010 na GCM70026985_58 unplaced-scaffold na na JBHSUF010000031.1 = NZ_JBHSUF010000031.1 Primary Assembly 64150 na GCM70026985_34 unplaced-scaffold na na JBHSUF010000032.1 = NZ_JBHSUF010000032.1 Primary Assembly 64062 na GCM70026985_3 unplaced-scaffold na na JBHSUF010000033.1 = NZ_JBHSUF010000033.1 Primary Assembly 62186 na GCM70026985_53 unplaced-scaffold na na JBHSUF010000034.1 = NZ_JBHSUF010000034.1 Primary Assembly 39886 na GCM70026985_30 unplaced-scaffold na na JBHSUF010000035.1 = NZ_JBHSUF010000035.1 Primary Assembly 26913 na GCM70026985_57 unplaced-scaffold na na JBHSUF010000036.1 = NZ_JBHSUF010000036.1 Primary Assembly 25542 na GCM70026985_71 unplaced-scaffold na na JBHSUF010000037.1 = NZ_JBHSUF010000037.1 Primary Assembly 17750 na GCM70026985_65 unplaced-scaffold na na JBHSUF010000038.1 = NZ_JBHSUF010000038.1 Primary Assembly 15870 na GCM70026985_72 unplaced-scaffold na na JBHSUF010000039.1 = NZ_JBHSUF010000039.1 Primary Assembly 14105 na GCM70026985_18 unplaced-scaffold na na JBHSUF010000040.1 = NZ_JBHSUF010000040.1 Primary Assembly 13680 na GCM70026985_7 unplaced-scaffold na na JBHSUF010000041.1 = NZ_JBHSUF010000041.1 Primary Assembly 12858 na GCM70026985_6 unplaced-scaffold na na JBHSUF010000042.1 = NZ_JBHSUF010000042.1 Primary Assembly 11877 na GCM70026985_32 unplaced-scaffold na na JBHSUF010000043.1 = NZ_JBHSUF010000043.1 Primary Assembly 11307 na GCM70026985_60 unplaced-scaffold na na JBHSUF010000044.1 = NZ_JBHSUF010000044.1 Primary Assembly 10505 na GCM70026985_4 unplaced-scaffold na na JBHSUF010000045.1 = NZ_JBHSUF010000045.1 Primary Assembly 8180 na GCM70026985_37 unplaced-scaffold na na JBHSUF010000046.1 = NZ_JBHSUF010000046.1 Primary Assembly 7421 na GCM70026985_74 unplaced-scaffold na na JBHSUF010000047.1 = NZ_JBHSUF010000047.1 Primary Assembly 6191 na GCM70026985_25 unplaced-scaffold na na JBHSUF010000048.1 = NZ_JBHSUF010000048.1 Primary Assembly 5536 na GCM70026985_51 unplaced-scaffold na na JBHSUF010000049.1 = NZ_JBHSUF010000049.1 Primary Assembly 4175 na GCM70026985_27 unplaced-scaffold na na JBHSUF010000050.1 = NZ_JBHSUF010000050.1 Primary Assembly 4097 na GCM70026985_17 unplaced-scaffold na na JBHSUF010000051.1 = NZ_JBHSUF010000051.1 Primary Assembly 3246 na GCM70026985_43 unplaced-scaffold na na JBHSUF010000052.1 = NZ_JBHSUF010000052.1 Primary Assembly 2757 na GCM70026985_40 unplaced-scaffold na na JBHSUF010000053.1 = NZ_JBHSUF010000053.1 Primary Assembly 2613 na GCM70026985_68 unplaced-scaffold na na JBHSUF010000054.1 = NZ_JBHSUF010000054.1 Primary Assembly 2561 na GCM70026985_48 unplaced-scaffold na na JBHSUF010000055.1 = NZ_JBHSUF010000055.1 Primary Assembly 2119 na GCM70026985_2 unplaced-scaffold na na JBHSUF010000056.1 = NZ_JBHSUF010000056.1 Primary Assembly 1590 na GCM70026985_5 unplaced-scaffold na na JBHSUF010000057.1 = NZ_JBHSUF010000057.1 Primary Assembly 1236 na GCM70026985_24 unplaced-scaffold na na JBHSUF010000058.1 = NZ_JBHSUF010000058.1 Primary Assembly 1235 na GCM70026985_12 unplaced-scaffold na na JBHSUF010000059.1 = NZ_JBHSUF010000059.1 Primary Assembly 1149 na GCM70026985_55 unplaced-scaffold na na JBHSUF010000060.1 = NZ_JBHSUF010000060.1 Primary Assembly 1075 na GCM70026985_46 unplaced-scaffold na na JBHSUF010000061.1 = NZ_JBHSUF010000061.1 Primary Assembly 1048 na GCM70026985_8 unplaced-scaffold na na JBHSUF010000062.1 = NZ_JBHSUF010000062.1 Primary Assembly 881 na GCM70026985_56 unplaced-scaffold na na JBHSUF010000063.1 = NZ_JBHSUF010000063.1 Primary Assembly 865 na GCM70026985_49 unplaced-scaffold na na JBHSUF010000064.1 = NZ_JBHSUF010000064.1 Primary Assembly 843 na GCM70026985_41 unplaced-scaffold na na JBHSUF010000065.1 = NZ_JBHSUF010000065.1 Primary Assembly 699 na GCM70026985_44 unplaced-scaffold na na JBHSUF010000066.1 = NZ_JBHSUF010000066.1 Primary Assembly 698 na GCM70026985_31 unplaced-scaffold na na JBHSUF010000067.1 = NZ_JBHSUF010000067.1 Primary Assembly 608 na GCM70026985_26 unplaced-scaffold na na JBHSUF010000068.1 = NZ_JBHSUF010000068.1 Primary Assembly 605 na GCM70026985_16 unplaced-scaffold na na JBHSUF010000069.1 = NZ_JBHSUF010000069.1 Primary Assembly 567 na GCM70026985_38 unplaced-scaffold na na JBHSUF010000070.1 = NZ_JBHSUF010000070.1 Primary Assembly 590 na GCM70026985_36 unplaced-scaffold na na JBHSUF010000071.1 = NZ_JBHSUF010000071.1 Primary Assembly 559 na GCM70026985_29 unplaced-scaffold na na JBHSUF010000072.1 = NZ_JBHSUF010000072.1 Primary Assembly 541 na GCM70026985_11 unplaced-scaffold na na JBHSUF010000073.1 = NZ_JBHSUF010000073.1 Primary Assembly 505 na GCM70026985_13 unplaced-scaffold na na JBHSUF010000074.1 = NZ_JBHSUF010000074.1 Primary Assembly 504 na GCM70026985_69 unplaced-scaffold na na JBHSUF010000075.1 = NZ_JBHSUF010000075.1 Primary Assembly 502 na GCM70026985_62 unplaced-scaffold na na JBHSUF010000076.1 = NZ_JBHSUF010000076.1 Primary Assembly 501 na