# Assembly name: ASM4267884v1 # Organism name: Sphingobium olei (a-proteobacteria) # Infraspecific name: strain=CCUG 54329 # Taxid: 420955 # BioSample: SAMN43284335 # BioProject: PRJNA595761 # Submitter: Institution of Microbiology, Chinese Academy of Science(WDCM) # Date: 2024-10-06 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBHTLS01 # Assembly method: SOAPdenovo v. v2.04; SPAdes v. v3.13.0; Velvet v. v1.2.10; Platanus-b v. v1.2.0 # Expected final version: yes # Genome coverage: 137x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_042678845.1 # RefSeq assembly accession: GCF_042678845.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042678865.1 GCF_042678865.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name GCM70027382_87 unplaced-scaffold na na JBHTLS010000001.1 = NZ_JBHTLS010000001.1 Primary Assembly 3774 na GCM70027382_65 unplaced-scaffold na na JBHTLS010000002.1 = NZ_JBHTLS010000002.1 Primary Assembly 3379 na GCM70027382_55 unplaced-scaffold na na JBHTLS010000003.1 = NZ_JBHTLS010000003.1 Primary Assembly 3832 na GCM70027382_33 unplaced-scaffold na na JBHTLS010000004.1 = NZ_JBHTLS010000004.1 Primary Assembly 2450 na GCM70027382_22 unplaced-scaffold na na JBHTLS010000005.1 = NZ_JBHTLS010000005.1 Primary Assembly 254453 na GCM70027382_5 unplaced-scaffold na na JBHTLS010000006.1 = NZ_JBHTLS010000006.1 Primary Assembly 56429 na GCM70027382_111 unplaced-scaffold na na JBHTLS010000007.1 = NZ_JBHTLS010000007.1 Primary Assembly 27559 na GCM70027382_90 unplaced-scaffold na na JBHTLS010000008.1 = NZ_JBHTLS010000008.1 Primary Assembly 15319 na GCM70027382_74 unplaced-scaffold na na JBHTLS010000009.1 = NZ_JBHTLS010000009.1 Primary Assembly 211260 na GCM70027382_6 unplaced-scaffold na na JBHTLS010000010.1 = NZ_JBHTLS010000010.1 Primary Assembly 51509 na GCM70027382_60 unplaced-scaffold na na JBHTLS010000011.1 = NZ_JBHTLS010000011.1 Primary Assembly 86530 na GCM70027382_47 unplaced-scaffold na na JBHTLS010000012.1 = NZ_JBHTLS010000012.1 Primary Assembly 531 na GCM70027382_103 unplaced-scaffold na na JBHTLS010000013.1 = NZ_JBHTLS010000013.1 Primary Assembly 532 na GCM70027382_81 unplaced-scaffold na na JBHTLS010000014.1 = NZ_JBHTLS010000014.1 Primary Assembly 568 na GCM70027382_135 unplaced-scaffold na na JBHTLS010000015.1 = NZ_JBHTLS010000015.1 Primary Assembly 586 na GCM70027382_15 unplaced-scaffold na na JBHTLS010000016.1 = NZ_JBHTLS010000016.1 Primary Assembly 590 na GCM70027382_10 unplaced-scaffold na na JBHTLS010000017.1 = NZ_JBHTLS010000017.1 Primary Assembly 610 na GCM70027382_107 unplaced-scaffold na na JBHTLS010000018.1 = NZ_JBHTLS010000018.1 Primary Assembly 627 na GCM70027382_89 unplaced-scaffold na na JBHTLS010000019.1 = NZ_JBHTLS010000019.1 Primary Assembly 640 na GCM70027382_28 unplaced-scaffold na na JBHTLS010000020.1 = NZ_JBHTLS010000020.1 Primary Assembly 691 na GCM70027382_112 unplaced-scaffold na na JBHTLS010000021.1 = NZ_JBHTLS010000021.1 Primary Assembly 771 na GCM70027382_126 unplaced-scaffold na na JBHTLS010000022.1 = NZ_JBHTLS010000022.1 Primary Assembly 778 na GCM70027382_91 unplaced-scaffold na na JBHTLS010000023.1 = NZ_JBHTLS010000023.1 Primary Assembly 853 na GCM70027382_97 unplaced-scaffold na na JBHTLS010000024.1 = NZ_JBHTLS010000024.1 Primary Assembly 861 na GCM70027382_49 unplaced-scaffold na na JBHTLS010000025.1 = NZ_JBHTLS010000025.1 Primary Assembly 905 na GCM70027382_99 unplaced-scaffold na na JBHTLS010000026.1 = NZ_JBHTLS010000026.1 Primary Assembly 911 na GCM70027382_123 unplaced-scaffold na na JBHTLS010000027.1 = NZ_JBHTLS010000027.1 Primary Assembly 926 na GCM70027382_94 unplaced-scaffold na na JBHTLS010000028.1 = NZ_JBHTLS010000028.1 Primary Assembly 932 na GCM70027382_16 unplaced-scaffold na na JBHTLS010000029.1 = NZ_JBHTLS010000029.1 Primary Assembly 942 na GCM70027382_117 unplaced-scaffold na na JBHTLS010000030.1 = NZ_JBHTLS010000030.1 Primary Assembly 958 na GCM70027382_92 unplaced-scaffold na na JBHTLS010000031.1 = NZ_JBHTLS010000031.1 Primary Assembly 963 na GCM70027382_76 unplaced-scaffold na na JBHTLS010000032.1 = NZ_JBHTLS010000032.1 Primary Assembly 1046 na GCM70027382_57 unplaced-scaffold na na JBHTLS010000033.1 = NZ_JBHTLS010000033.1 Primary Assembly 1052 na GCM70027382_77 unplaced-scaffold na na JBHTLS010000034.1 = NZ_JBHTLS010000034.1 Primary Assembly 1062 na GCM70027382_20 unplaced-scaffold na na JBHTLS010000035.1 = NZ_JBHTLS010000035.1 Primary Assembly 1085 na GCM70027382_53 unplaced-scaffold na na JBHTLS010000036.1 = NZ_JBHTLS010000036.1 Primary Assembly 1093 na GCM70027382_132 unplaced-scaffold na na JBHTLS010000037.1 = NZ_JBHTLS010000037.1 Primary Assembly 1115 na GCM70027382_119 unplaced-scaffold na na JBHTLS010000038.1 = NZ_JBHTLS010000038.1 Primary Assembly 1137 na GCM70027382_39 unplaced-scaffold na na JBHTLS010000039.1 = NZ_JBHTLS010000039.1 Primary Assembly 1275 na GCM70027382_127 unplaced-scaffold na na JBHTLS010000040.1 = NZ_JBHTLS010000040.1 Primary Assembly 1284 na GCM70027382_11 unplaced-scaffold na na JBHTLS010000041.1 = NZ_JBHTLS010000041.1 Primary Assembly 1313 na GCM70027382_42 unplaced-scaffold na na JBHTLS010000042.1 = NZ_JBHTLS010000042.1 Primary Assembly 1371 na GCM70027382_51 unplaced-scaffold na na JBHTLS010000043.1 = NZ_JBHTLS010000043.1 Primary Assembly 1464 na GCM70027382_23 unplaced-scaffold na na JBHTLS010000044.1 = NZ_JBHTLS010000044.1 Primary Assembly 1515 na GCM70027382_14 unplaced-scaffold na na JBHTLS010000045.1 = NZ_JBHTLS010000045.1 Primary Assembly 1604 na GCM70027382_122 unplaced-scaffold na na JBHTLS010000046.1 = NZ_JBHTLS010000046.1 Primary Assembly 1813 na GCM70027382_100 unplaced-scaffold na na JBHTLS010000047.1 = NZ_JBHTLS010000047.1 Primary Assembly 1817 na GCM70027382_82 unplaced-scaffold na na JBHTLS010000048.1 = NZ_JBHTLS010000048.1 Primary Assembly 1818 na GCM70027382_44 unplaced-scaffold na na JBHTLS010000049.1 = NZ_JBHTLS010000049.1 Primary Assembly 2153 na GCM70027382_95 unplaced-scaffold na na JBHTLS010000050.1 = NZ_JBHTLS010000050.1 Primary Assembly 2205 na GCM70027382_13 unplaced-scaffold na na JBHTLS010000051.1 = NZ_JBHTLS010000051.1 Primary Assembly 2262 na GCM70027382_35 unplaced-scaffold na na JBHTLS010000052.1 = NZ_JBHTLS010000052.1 Primary Assembly 2275 na GCM70027382_32 unplaced-scaffold na na JBHTLS010000053.1 = NZ_JBHTLS010000053.1 Primary Assembly 2374 na GCM70027382_115 unplaced-scaffold na na JBHTLS010000054.1 = NZ_JBHTLS010000054.1 Primary Assembly 2560 na GCM70027382_72 unplaced-scaffold na na JBHTLS010000055.1 = NZ_JBHTLS010000055.1 Primary Assembly 2604 na GCM70027382_101 unplaced-scaffold na na JBHTLS010000056.1 = NZ_JBHTLS010000056.1 Primary Assembly 2721 na GCM70027382_102 unplaced-scaffold na na JBHTLS010000057.1 = NZ_JBHTLS010000057.1 Primary Assembly 2786 na GCM70027382_38 unplaced-scaffold na na JBHTLS010000058.1 = NZ_JBHTLS010000058.1 Primary Assembly 2867 na GCM70027382_63 unplaced-scaffold na na JBHTLS010000059.1 = NZ_JBHTLS010000059.1 Primary Assembly 3226 na GCM70027382_120 unplaced-scaffold na na JBHTLS010000060.1 = NZ_JBHTLS010000060.1 Primary Assembly 3803 na GCM70027382_61 unplaced-scaffold na na JBHTLS010000061.1 = NZ_JBHTLS010000061.1 Primary Assembly 3887 na GCM70027382_116 unplaced-scaffold na na JBHTLS010000062.1 = NZ_JBHTLS010000062.1 Primary Assembly 3909 na GCM70027382_78 unplaced-scaffold na na JBHTLS010000063.1 = NZ_JBHTLS010000063.1 Primary Assembly 4008 na GCM70027382_134 unplaced-scaffold na na JBHTLS010000064.1 = NZ_JBHTLS010000064.1 Primary Assembly 4070 na GCM70027382_58 unplaced-scaffold na na JBHTLS010000065.1 = NZ_JBHTLS010000065.1 Primary Assembly 4086 na GCM70027382_52 unplaced-scaffold na na JBHTLS010000066.1 = NZ_JBHTLS010000066.1 Primary Assembly 4183 na GCM70027382_1 unplaced-scaffold na na JBHTLS010000067.1 = NZ_JBHTLS010000067.1 Primary Assembly 4297 na GCM70027382_68 unplaced-scaffold na na JBHTLS010000068.1 = NZ_JBHTLS010000068.1 Primary Assembly 4621 na GCM70027382_109 unplaced-scaffold na na JBHTLS010000069.1 = NZ_JBHTLS010000069.1 Primary Assembly 4628 na GCM70027382_71 unplaced-scaffold na na JBHTLS010000070.1 = NZ_JBHTLS010000070.1 Primary Assembly 4712 na GCM70027382_69 unplaced-scaffold na na JBHTLS010000071.1 = NZ_JBHTLS010000071.1 Primary Assembly 5151 na GCM70027382_48 unplaced-scaffold na na JBHTLS010000072.1 = NZ_JBHTLS010000072.1 Primary Assembly 5333 na GCM70027382_31 unplaced-scaffold na na JBHTLS010000073.1 = NZ_JBHTLS010000073.1 Primary Assembly 5485 na GCM70027382_9 unplaced-scaffold na na JBHTLS010000074.1 = NZ_JBHTLS010000074.1 Primary Assembly 6484 na GCM70027382_133 unplaced-scaffold na na JBHTLS010000075.1 = NZ_JBHTLS010000075.1 Primary Assembly 6631 na GCM70027382_88 unplaced-scaffold na na JBHTLS010000076.1 = NZ_JBHTLS010000076.1 Primary Assembly 6650 na GCM70027382_85 unplaced-scaffold na na JBHTLS010000077.1 = NZ_JBHTLS010000077.1 Primary Assembly 6727 na GCM70027382_37 unplaced-scaffold na na JBHTLS010000078.1 = NZ_JBHTLS010000078.1 Primary Assembly 6730 na GCM70027382_21 unplaced-scaffold na na JBHTLS010000079.1 = NZ_JBHTLS010000079.1 Primary Assembly 6902 na GCM70027382_105 unplaced-scaffold na na JBHTLS010000080.1 = NZ_JBHTLS010000080.1 Primary Assembly 7009 na GCM70027382_56 unplaced-scaffold na na JBHTLS010000081.1 = NZ_JBHTLS010000081.1 Primary Assembly 8349 na GCM70027382_75 unplaced-scaffold na na JBHTLS010000082.1 = NZ_JBHTLS010000082.1 Primary Assembly 8353 na GCM70027382_93 unplaced-scaffold na na JBHTLS010000083.1 = NZ_JBHTLS010000083.1 Primary Assembly 9241 na GCM70027382_110 unplaced-scaffold na na JBHTLS010000084.1 = NZ_JBHTLS010000084.1 Primary Assembly 9361 na GCM70027382_125 unplaced-scaffold na na JBHTLS010000085.1 = NZ_JBHTLS010000085.1 Primary Assembly 9534 na GCM70027382_7 unplaced-scaffold na na JBHTLS010000086.1 = NZ_JBHTLS010000086.1 Primary Assembly 9942 na GCM70027382_26 unplaced-scaffold na na JBHTLS010000087.1 = NZ_JBHTLS010000087.1 Primary Assembly 10043 na GCM70027382_40 unplaced-scaffold na na JBHTLS010000088.1 = NZ_JBHTLS010000088.1 Primary Assembly 10862 na GCM70027382_70 unplaced-scaffold na na JBHTLS010000089.1 = NZ_JBHTLS010000089.1 Primary Assembly 12099 na GCM70027382_59 unplaced-scaffold na na JBHTLS010000090.1 = NZ_JBHTLS010000090.1 Primary Assembly 12326 na GCM70027382_12 unplaced-scaffold na na JBHTLS010000091.1 = NZ_JBHTLS010000091.1 Primary Assembly 12496 na GCM70027382_43 unplaced-scaffold na na JBHTLS010000092.1 = NZ_JBHTLS010000092.1 Primary Assembly 14005 na GCM70027382_114 unplaced-scaffold na na JBHTLS010000093.1 = NZ_JBHTLS010000093.1 Primary Assembly 14025 na GCM70027382_128 unplaced-scaffold na na JBHTLS010000094.1 = NZ_JBHTLS010000094.1 Primary Assembly 14682 na GCM70027382_84 unplaced-scaffold na na JBHTLS010000095.1 = NZ_JBHTLS010000095.1 Primary Assembly 15169 na GCM70027382_104 unplaced-scaffold na na JBHTLS010000096.1 = NZ_JBHTLS010000096.1 Primary Assembly 15650 na GCM70027382_124 unplaced-scaffold na na JBHTLS010000097.1 = NZ_JBHTLS010000097.1 Primary Assembly 16945 na GCM70027382_108 unplaced-scaffold na na JBHTLS010000098.1 = NZ_JBHTLS010000098.1 Primary Assembly 17440 na GCM70027382_96 unplaced-scaffold na na JBHTLS010000099.1 = NZ_JBHTLS010000099.1 Primary Assembly 22027 na GCM70027382_34 unplaced-scaffold na na JBHTLS010000100.1 = NZ_JBHTLS010000100.1 Primary Assembly 22068 na GCM70027382_118 unplaced-scaffold na na JBHTLS010000101.1 = NZ_JBHTLS010000101.1 Primary Assembly 22384 na GCM70027382_67 unplaced-scaffold na na JBHTLS010000102.1 = NZ_JBHTLS010000102.1 Primary Assembly 22616 na GCM70027382_17 unplaced-scaffold na na JBHTLS010000103.1 = NZ_JBHTLS010000103.1 Primary Assembly 22757 na GCM70027382_79 unplaced-scaffold na na JBHTLS010000104.1 = NZ_JBHTLS010000104.1 Primary Assembly 23653 na GCM70027382_66 unplaced-scaffold na na JBHTLS010000105.1 = NZ_JBHTLS010000105.1 Primary Assembly 23762 na GCM70027382_113 unplaced-scaffold na na JBHTLS010000106.1 = NZ_JBHTLS010000106.1 Primary Assembly 24206 na GCM70027382_129 unplaced-scaffold na na JBHTLS010000107.1 = NZ_JBHTLS010000107.1 Primary Assembly 27789 na GCM70027382_106 unplaced-scaffold na na JBHTLS010000108.1 = NZ_JBHTLS010000108.1 Primary Assembly 28041 na GCM70027382_30 unplaced-scaffold na na JBHTLS010000109.1 = NZ_JBHTLS010000109.1 Primary Assembly 29510 na GCM70027382_25 unplaced-scaffold na na JBHTLS010000110.1 = NZ_JBHTLS010000110.1 Primary Assembly 35038 na GCM70027382_4 unplaced-scaffold na na JBHTLS010000111.1 = NZ_JBHTLS010000111.1 Primary Assembly 35400 na GCM70027382_121 unplaced-scaffold na na JBHTLS010000112.1 = NZ_JBHTLS010000112.1 Primary Assembly 36369 na GCM70027382_29 unplaced-scaffold na na JBHTLS010000113.1 = NZ_JBHTLS010000113.1 Primary Assembly 38216 na GCM70027382_83 unplaced-scaffold na na JBHTLS010000114.1 = NZ_JBHTLS010000114.1 Primary Assembly 41440 na GCM70027382_64 unplaced-scaffold na na JBHTLS010000115.1 = NZ_JBHTLS010000115.1 Primary Assembly 42541 na GCM70027382_50 unplaced-scaffold na na JBHTLS010000116.1 = NZ_JBHTLS010000116.1 Primary Assembly 45059 na GCM70027382_24 unplaced-scaffold na na JBHTLS010000117.1 = NZ_JBHTLS010000117.1 Primary Assembly 46589 na GCM70027382_2 unplaced-scaffold na na JBHTLS010000118.1 = NZ_JBHTLS010000118.1 Primary Assembly 50477 na GCM70027382_19 unplaced-scaffold na na JBHTLS010000119.1 = NZ_JBHTLS010000119.1 Primary Assembly 55590 na GCM70027382_45 unplaced-scaffold na na JBHTLS010000120.1 = NZ_JBHTLS010000120.1 Primary Assembly 56194 na GCM70027382_27 unplaced-scaffold na na JBHTLS010000121.1 = NZ_JBHTLS010000121.1 Primary Assembly 56340 na GCM70027382_8 unplaced-scaffold na na JBHTLS010000122.1 = NZ_JBHTLS010000122.1 Primary Assembly 79158 na GCM70027382_131 unplaced-scaffold na na JBHTLS010000123.1 = NZ_JBHTLS010000123.1 Primary Assembly 80434 na GCM70027382_80 unplaced-scaffold na na JBHTLS010000124.1 = NZ_JBHTLS010000124.1 Primary Assembly 90803 na GCM70027382_130 unplaced-scaffold na na JBHTLS010000125.1 = NZ_JBHTLS010000125.1 Primary Assembly 102410 na GCM70027382_41 unplaced-scaffold na na JBHTLS010000126.1 = NZ_JBHTLS010000126.1 Primary Assembly 106207 na GCM70027382_98 unplaced-scaffold na na JBHTLS010000127.1 = NZ_JBHTLS010000127.1 Primary Assembly 113170 na GCM70027382_3 unplaced-scaffold na na JBHTLS010000128.1 = NZ_JBHTLS010000128.1 Primary Assembly 125712 na GCM70027382_54 unplaced-scaffold na na JBHTLS010000129.1 = NZ_JBHTLS010000129.1 Primary Assembly 135393 na GCM70027382_18 unplaced-scaffold na na JBHTLS010000130.1 = NZ_JBHTLS010000130.1 Primary Assembly 165195 na GCM70027382_86 unplaced-scaffold na na JBHTLS010000131.1 = NZ_JBHTLS010000131.1 Primary Assembly 177635 na GCM70027382_73 unplaced-scaffold na na JBHTLS010000132.1 = NZ_JBHTLS010000132.1 Primary Assembly 179141 na GCM70027382_62 unplaced-scaffold na na JBHTLS010000133.1 = NZ_JBHTLS010000133.1 Primary Assembly 209072 na GCM70027382_46 unplaced-scaffold na na JBHTLS010000134.1 = NZ_JBHTLS010000134.1 Primary Assembly 386443 na GCM70027382_36 unplaced-scaffold na na JBHTLS010000135.1 = NZ_JBHTLS010000135.1 Primary Assembly 589911 na