# Assembly name: ASM4267904v1 # Organism name: Sporosarcina contaminans (firmicutes) # Infraspecific name: strain=CCUG 53915 # Taxid: 633403 # BioSample: SAMN43284334 # BioProject: PRJNA595761 # Submitter: Institution of Microbiology, Chinese Academy of Science(WDCM) # Date: 2024-10-06 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBHTLT01 # Assembly method: SOAPdenovo v. v2.04; SPAdes v. v3.13.0; Velvet v. v1.2.10; Platanus-b v. v1.2.0 # Expected final version: yes # Genome coverage: 345x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_042679045.1 # RefSeq assembly accession: GCF_042679045.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042679055.1 GCF_042679055.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name GCM70027381_39 unplaced-scaffold na na JBHTLT010000001.1 = NZ_JBHTLT010000001.1 Primary Assembly 125605 na GCM70027381_8 unplaced-scaffold na na JBHTLT010000002.1 = NZ_JBHTLT010000002.1 Primary Assembly 22806 na GCM70027381_69 unplaced-scaffold na na JBHTLT010000003.1 = NZ_JBHTLT010000003.1 Primary Assembly 40276 na GCM70027381_133 unplaced-scaffold na na JBHTLT010000004.1 = NZ_JBHTLT010000004.1 Primary Assembly 39846 na GCM70027381_96 unplaced-scaffold na na JBHTLT010000005.1 = NZ_JBHTLT010000005.1 Primary Assembly 695 na GCM70027381_81 unplaced-scaffold na na JBHTLT010000006.1 = NZ_JBHTLT010000006.1 Primary Assembly 1274 na GCM70027381_55 unplaced-scaffold na na JBHTLT010000007.1 = NZ_JBHTLT010000007.1 Primary Assembly 9610 na GCM70027381_112 unplaced-scaffold na na JBHTLT010000008.1 = NZ_JBHTLT010000008.1 Primary Assembly 13675 na GCM70027381_83 unplaced-scaffold na na JBHTLT010000009.1 = NZ_JBHTLT010000009.1 Primary Assembly 14641 na GCM70027381_11 unplaced-scaffold na na JBHTLT010000010.1 = NZ_JBHTLT010000010.1 Primary Assembly 56576 na GCM70027381_34 unplaced-scaffold na na JBHTLT010000011.1 = NZ_JBHTLT010000011.1 Primary Assembly 12634 na GCM70027381_120 unplaced-scaffold na na JBHTLT010000012.1 = NZ_JBHTLT010000012.1 Primary Assembly 7871 na GCM70027381_134 unplaced-scaffold na na JBHTLT010000013.1 = NZ_JBHTLT010000013.1 Primary Assembly 113017 na GCM70027381_48 unplaced-scaffold na na JBHTLT010000014.1 = NZ_JBHTLT010000014.1 Primary Assembly 44231 na GCM70027381_25 unplaced-scaffold na na JBHTLT010000015.1 = NZ_JBHTLT010000015.1 Primary Assembly 11754 na GCM70027381_90 unplaced-scaffold na na JBHTLT010000016.1 = NZ_JBHTLT010000016.1 Primary Assembly 225323 na GCM70027381_73 unplaced-scaffold na na JBHTLT010000017.1 = NZ_JBHTLT010000017.1 Primary Assembly 1910 na GCM70027381_110 unplaced-scaffold na na JBHTLT010000018.1 = NZ_JBHTLT010000018.1 Primary Assembly 1149 na GCM70027381_92 unplaced-scaffold na na JBHTLT010000019.1 = NZ_JBHTLT010000019.1 Primary Assembly 49515 na GCM70027381_125 unplaced-scaffold na na JBHTLT010000020.1 = NZ_JBHTLT010000020.1 Primary Assembly 131071 na GCM70027381_20 unplaced-scaffold na na JBHTLT010000021.1 = NZ_JBHTLT010000021.1 Primary Assembly 33579 na GCM70027381_16 unplaced-scaffold na na JBHTLT010000022.1 = NZ_JBHTLT010000022.1 Primary Assembly 53732 na GCM70027381_45 unplaced-scaffold na na JBHTLT010000023.1 = NZ_JBHTLT010000023.1 Primary Assembly 2470 na GCM70027381_61 unplaced-scaffold na na JBHTLT010000024.1 = NZ_JBHTLT010000024.1 Primary Assembly 1152 na GCM70027381_88 unplaced-scaffold na na JBHTLT010000025.1 = NZ_JBHTLT010000025.1 Primary Assembly 1134 na GCM70027381_31 unplaced-scaffold na na JBHTLT010000026.1 = NZ_JBHTLT010000026.1 Primary Assembly 26451 na GCM70027381_41 unplaced-scaffold na na JBHTLT010000027.1 = NZ_JBHTLT010000027.1 Primary Assembly 94083 na GCM70027381_21 unplaced-scaffold na na JBHTLT010000028.1 = NZ_JBHTLT010000028.1 Primary Assembly 67080 na GCM70027381_79 unplaced-scaffold na na JBHTLT010000029.1 = NZ_JBHTLT010000029.1 Primary Assembly 69344 na GCM70027381_89 unplaced-scaffold na na JBHTLT010000030.1 = NZ_JBHTLT010000030.1 Primary Assembly 18807 na GCM70027381_132 unplaced-scaffold na na JBHTLT010000031.1 = NZ_JBHTLT010000031.1 Primary Assembly 19576 na GCM70027381_26 unplaced-scaffold na na JBHTLT010000032.1 = NZ_JBHTLT010000032.1 Primary Assembly 13087 na GCM70027381_6 unplaced-scaffold na na JBHTLT010000033.1 = NZ_JBHTLT010000033.1 Primary Assembly 83403 na GCM70027381_10 unplaced-scaffold na na JBHTLT010000034.1 = NZ_JBHTLT010000034.1 Primary Assembly 18507 na GCM70027381_76 unplaced-scaffold na na JBHTLT010000035.1 = NZ_JBHTLT010000035.1 Primary Assembly 54003 na GCM70027381_44 unplaced-scaffold na na JBHTLT010000036.1 = NZ_JBHTLT010000036.1 Primary Assembly 27791 na GCM70027381_94 unplaced-scaffold na na JBHTLT010000037.1 = NZ_JBHTLT010000037.1 Primary Assembly 71131 na GCM70027381_56 unplaced-scaffold na na JBHTLT010000038.1 = NZ_JBHTLT010000038.1 Primary Assembly 50498 na GCM70027381_97 unplaced-scaffold na na JBHTLT010000039.1 = NZ_JBHTLT010000039.1 Primary Assembly 96188 na GCM70027381_108 unplaced-scaffold na na JBHTLT010000040.1 = NZ_JBHTLT010000040.1 Primary Assembly 14992 na GCM70027381_91 unplaced-scaffold na na JBHTLT010000041.1 = NZ_JBHTLT010000041.1 Primary Assembly 13176 na GCM70027381_65 unplaced-scaffold na na JBHTLT010000042.1 = NZ_JBHTLT010000042.1 Primary Assembly 72872 na GCM70027381_47 unplaced-scaffold na na JBHTLT010000043.1 = NZ_JBHTLT010000043.1 Primary Assembly 61931 na GCM70027381_27 unplaced-scaffold na na JBHTLT010000044.1 = NZ_JBHTLT010000044.1 Primary Assembly 64628 na GCM70027381_67 unplaced-scaffold na na JBHTLT010000045.1 = NZ_JBHTLT010000045.1 Primary Assembly 47768 na GCM70027381_51 unplaced-scaffold na na JBHTLT010000046.1 = NZ_JBHTLT010000046.1 Primary Assembly 51131 na GCM70027381_72 unplaced-scaffold na na JBHTLT010000047.1 = NZ_JBHTLT010000047.1 Primary Assembly 97676 na GCM70027381_129 unplaced-scaffold na na JBHTLT010000048.1 = NZ_JBHTLT010000048.1 Primary Assembly 59742 na GCM70027381_12 unplaced-scaffold na na JBHTLT010000049.1 = NZ_JBHTLT010000049.1 Primary Assembly 53714 na GCM70027381_33 unplaced-scaffold na na JBHTLT010000050.1 = NZ_JBHTLT010000050.1 Primary Assembly 508 na GCM70027381_15 unplaced-scaffold na na JBHTLT010000051.1 = NZ_JBHTLT010000051.1 Primary Assembly 539 na GCM70027381_124 unplaced-scaffold na na JBHTLT010000052.1 = NZ_JBHTLT010000052.1 Primary Assembly 563 na GCM70027381_118 unplaced-scaffold na na JBHTLT010000053.1 = NZ_JBHTLT010000053.1 Primary Assembly 607 na GCM70027381_101 unplaced-scaffold na na JBHTLT010000054.1 = NZ_JBHTLT010000054.1 Primary Assembly 615 na GCM70027381_87 unplaced-scaffold na na JBHTLT010000055.1 = NZ_JBHTLT010000055.1 Primary Assembly 635 na GCM70027381_2 unplaced-scaffold na na JBHTLT010000056.1 = NZ_JBHTLT010000056.1 Primary Assembly 699 na GCM70027381_64 unplaced-scaffold na na JBHTLT010000057.1 = NZ_JBHTLT010000057.1 Primary Assembly 856 na GCM70027381_14 unplaced-scaffold na na JBHTLT010000058.1 = NZ_JBHTLT010000058.1 Primary Assembly 922 na GCM70027381_68 unplaced-scaffold na na JBHTLT010000059.1 = NZ_JBHTLT010000059.1 Primary Assembly 1074 na GCM70027381_30 unplaced-scaffold na na JBHTLT010000060.1 = NZ_JBHTLT010000060.1 Primary Assembly 1166 na GCM70027381_78 unplaced-scaffold na na JBHTLT010000061.1 = NZ_JBHTLT010000061.1 Primary Assembly 1295 na GCM70027381_106 unplaced-scaffold na na JBHTLT010000062.1 = NZ_JBHTLT010000062.1 Primary Assembly 1344 na GCM70027381_1 unplaced-scaffold na na JBHTLT010000063.1 = NZ_JBHTLT010000063.1 Primary Assembly 1418 na GCM70027381_62 unplaced-scaffold na na JBHTLT010000064.1 = NZ_JBHTLT010000064.1 Primary Assembly 1448 na GCM70027381_114 unplaced-scaffold na na JBHTLT010000065.1 = NZ_JBHTLT010000065.1 Primary Assembly 1577 na GCM70027381_24 unplaced-scaffold na na JBHTLT010000066.1 = NZ_JBHTLT010000066.1 Primary Assembly 1654 na GCM70027381_86 unplaced-scaffold na na JBHTLT010000067.1 = NZ_JBHTLT010000067.1 Primary Assembly 1674 na GCM70027381_98 unplaced-scaffold na na JBHTLT010000068.1 = NZ_JBHTLT010000068.1 Primary Assembly 1699 na GCM70027381_70 unplaced-scaffold na na JBHTLT010000069.1 = NZ_JBHTLT010000069.1 Primary Assembly 1810 na GCM70027381_28 unplaced-scaffold na na JBHTLT010000070.1 = NZ_JBHTLT010000070.1 Primary Assembly 1834 na GCM70027381_119 unplaced-scaffold na na JBHTLT010000071.1 = NZ_JBHTLT010000071.1 Primary Assembly 2000 na GCM70027381_111 unplaced-scaffold na na JBHTLT010000072.1 = NZ_JBHTLT010000072.1 Primary Assembly 2334 na GCM70027381_85 unplaced-scaffold na na JBHTLT010000073.1 = NZ_JBHTLT010000073.1 Primary Assembly 2398 na GCM70027381_63 unplaced-scaffold na na JBHTLT010000074.1 = NZ_JBHTLT010000074.1 Primary Assembly 2558 na GCM70027381_43 unplaced-scaffold na na JBHTLT010000075.1 = NZ_JBHTLT010000075.1 Primary Assembly 3114 na GCM70027381_19 unplaced-scaffold na na JBHTLT010000076.1 = NZ_JBHTLT010000076.1 Primary Assembly 3469 na GCM70027381_131 unplaced-scaffold na na JBHTLT010000077.1 = NZ_JBHTLT010000077.1 Primary Assembly 4182 na GCM70027381_117 unplaced-scaffold na na JBHTLT010000078.1 = NZ_JBHTLT010000078.1 Primary Assembly 4285 na GCM70027381_32 unplaced-scaffold na na JBHTLT010000079.1 = NZ_JBHTLT010000079.1 Primary Assembly 4716 na GCM70027381_35 unplaced-scaffold na na JBHTLT010000080.1 = NZ_JBHTLT010000080.1 Primary Assembly 4770 na GCM70027381_107 unplaced-scaffold na na JBHTLT010000081.1 = NZ_JBHTLT010000081.1 Primary Assembly 5045 na GCM70027381_82 unplaced-scaffold na na JBHTLT010000082.1 = NZ_JBHTLT010000082.1 Primary Assembly 5097 na GCM70027381_66 unplaced-scaffold na na JBHTLT010000083.1 = NZ_JBHTLT010000083.1 Primary Assembly 5215 na GCM70027381_104 unplaced-scaffold na na JBHTLT010000084.1 = NZ_JBHTLT010000084.1 Primary Assembly 5297 na GCM70027381_122 unplaced-scaffold na na JBHTLT010000085.1 = NZ_JBHTLT010000085.1 Primary Assembly 5471 na GCM70027381_4 unplaced-scaffold na na JBHTLT010000086.1 = NZ_JBHTLT010000086.1 Primary Assembly 5487 na GCM70027381_40 unplaced-scaffold na na JBHTLT010000087.1 = NZ_JBHTLT010000087.1 Primary Assembly 6304 na GCM70027381_57 unplaced-scaffold na na JBHTLT010000088.1 = NZ_JBHTLT010000088.1 Primary Assembly 6794 na GCM70027381_80 unplaced-scaffold na na JBHTLT010000089.1 = NZ_JBHTLT010000089.1 Primary Assembly 7066 na GCM70027381_29 unplaced-scaffold na na JBHTLT010000090.1 = NZ_JBHTLT010000090.1 Primary Assembly 7602 na GCM70027381_7 unplaced-scaffold na na JBHTLT010000091.1 = NZ_JBHTLT010000091.1 Primary Assembly 7795 na GCM70027381_42 unplaced-scaffold na na JBHTLT010000092.1 = NZ_JBHTLT010000092.1 Primary Assembly 7856 na GCM70027381_75 unplaced-scaffold na na JBHTLT010000093.1 = NZ_JBHTLT010000093.1 Primary Assembly 10229 na GCM70027381_52 unplaced-scaffold na na JBHTLT010000094.1 = NZ_JBHTLT010000094.1 Primary Assembly 10458 na GCM70027381_115 unplaced-scaffold na na JBHTLT010000095.1 = NZ_JBHTLT010000095.1 Primary Assembly 11717 na GCM70027381_93 unplaced-scaffold na na JBHTLT010000096.1 = NZ_JBHTLT010000096.1 Primary Assembly 11833 na GCM70027381_23 unplaced-scaffold na na JBHTLT010000097.1 = NZ_JBHTLT010000097.1 Primary Assembly 12620 na GCM70027381_135 unplaced-scaffold na na JBHTLT010000098.1 = NZ_JBHTLT010000098.1 Primary Assembly 13358 na GCM70027381_58 unplaced-scaffold na na JBHTLT010000099.1 = NZ_JBHTLT010000099.1 Primary Assembly 13703 na GCM70027381_60 unplaced-scaffold na na JBHTLT010000100.1 = NZ_JBHTLT010000100.1 Primary Assembly 14107 na GCM70027381_49 unplaced-scaffold na na JBHTLT010000101.1 = NZ_JBHTLT010000101.1 Primary Assembly 14168 na GCM70027381_13 unplaced-scaffold na na JBHTLT010000102.1 = NZ_JBHTLT010000102.1 Primary Assembly 15632 na GCM70027381_50 unplaced-scaffold na na JBHTLT010000103.1 = NZ_JBHTLT010000103.1 Primary Assembly 15713 na GCM70027381_74 unplaced-scaffold na na JBHTLT010000104.1 = NZ_JBHTLT010000104.1 Primary Assembly 16589 na GCM70027381_123 unplaced-scaffold na na JBHTLT010000105.1 = NZ_JBHTLT010000105.1 Primary Assembly 16634 na GCM70027381_5 unplaced-scaffold na na JBHTLT010000106.1 = NZ_JBHTLT010000106.1 Primary Assembly 17055 na GCM70027381_102 unplaced-scaffold na na JBHTLT010000107.1 = NZ_JBHTLT010000107.1 Primary Assembly 17059 na GCM70027381_116 unplaced-scaffold na na JBHTLT010000108.1 = NZ_JBHTLT010000108.1 Primary Assembly 17322 na GCM70027381_77 unplaced-scaffold na na JBHTLT010000109.1 = NZ_JBHTLT010000109.1 Primary Assembly 18901 na GCM70027381_109 unplaced-scaffold na na JBHTLT010000110.1 = NZ_JBHTLT010000110.1 Primary Assembly 19095 na GCM70027381_54 unplaced-scaffold na na JBHTLT010000111.1 = NZ_JBHTLT010000111.1 Primary Assembly 19125 na GCM70027381_59 unplaced-scaffold na na JBHTLT010000112.1 = NZ_JBHTLT010000112.1 Primary Assembly 19575 na GCM70027381_126 unplaced-scaffold na na JBHTLT010000113.1 = NZ_JBHTLT010000113.1 Primary Assembly 20169 na GCM70027381_105 unplaced-scaffold na na JBHTLT010000114.1 = NZ_JBHTLT010000114.1 Primary Assembly 23135 na GCM70027381_71 unplaced-scaffold na na JBHTLT010000115.1 = NZ_JBHTLT010000115.1 Primary Assembly 23175 na GCM70027381_3 unplaced-scaffold na na JBHTLT010000116.1 = NZ_JBHTLT010000116.1 Primary Assembly 23453 na GCM70027381_38 unplaced-scaffold na na JBHTLT010000117.1 = NZ_JBHTLT010000117.1 Primary Assembly 26340 na GCM70027381_113 unplaced-scaffold na na JBHTLT010000118.1 = NZ_JBHTLT010000118.1 Primary Assembly 28261 na GCM70027381_128 unplaced-scaffold na na JBHTLT010000119.1 = NZ_JBHTLT010000119.1 Primary Assembly 37048 na GCM70027381_18 unplaced-scaffold na na JBHTLT010000120.1 = NZ_JBHTLT010000120.1 Primary Assembly 40224 na GCM70027381_100 unplaced-scaffold na na JBHTLT010000121.1 = NZ_JBHTLT010000121.1 Primary Assembly 40942 na GCM70027381_46 unplaced-scaffold na na JBHTLT010000122.1 = NZ_JBHTLT010000122.1 Primary Assembly 42387 na GCM70027381_130 unplaced-scaffold na na JBHTLT010000123.1 = NZ_JBHTLT010000123.1 Primary Assembly 47127 na GCM70027381_103 unplaced-scaffold na na JBHTLT010000124.1 = NZ_JBHTLT010000124.1 Primary Assembly 48280 na GCM70027381_37 unplaced-scaffold na na JBHTLT010000125.1 = NZ_JBHTLT010000125.1 Primary Assembly 50747 na GCM70027381_121 unplaced-scaffold na na JBHTLT010000126.1 = NZ_JBHTLT010000126.1 Primary Assembly 54160 na GCM70027381_17 unplaced-scaffold na na JBHTLT010000127.1 = NZ_JBHTLT010000127.1 Primary Assembly 54653 na GCM70027381_36 unplaced-scaffold na na JBHTLT010000128.1 = NZ_JBHTLT010000128.1 Primary Assembly 54860 na GCM70027381_95 unplaced-scaffold na na JBHTLT010000129.1 = NZ_JBHTLT010000129.1 Primary Assembly 55747 na GCM70027381_22 unplaced-scaffold na na JBHTLT010000130.1 = NZ_JBHTLT010000130.1 Primary Assembly 62881 na GCM70027381_99 unplaced-scaffold na na JBHTLT010000131.1 = NZ_JBHTLT010000131.1 Primary Assembly 63823 na GCM70027381_53 unplaced-scaffold na na JBHTLT010000132.1 = NZ_JBHTLT010000132.1 Primary Assembly 66780 na GCM70027381_127 unplaced-scaffold na na JBHTLT010000133.1 = NZ_JBHTLT010000133.1 Primary Assembly 68139 na GCM70027381_84 unplaced-scaffold na na JBHTLT010000134.1 = NZ_JBHTLT010000134.1 Primary Assembly 73859 na GCM70027381_9 unplaced-scaffold na na JBHTLT010000135.1 = NZ_JBHTLT010000135.1 Primary Assembly 82378 na