# Assembly name: ASM4355587v1 # Organism name: Pelomonas margarita (b-proteobacteria) # Infraspecific name: strain=LKC17W # Taxid: 3299031 # BioSample: SAMN43335996 # BioProject: PRJNA575502 # Submitter: Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences # Date: 2024-10-21 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JBIGHW01 # Assembly method: SPAdes v. 3.15.5 # Expected final version: no # Genome coverage: 366.484x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_043555875.1 # RefSeq assembly accession: GCF_043555875.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_043555915.1 GCF_043555915.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_805356_cov_49.319769 unplaced-scaffold na na JBIGHW010000001.1 = NZ_JBIGHW010000001.1 Primary Assembly 805356 na NODE_2_length_546989_cov_63.712163 unplaced-scaffold na na JBIGHW010000002.1 = NZ_JBIGHW010000002.1 Primary Assembly 546989 na NODE_3_length_533238_cov_48.240976 unplaced-scaffold na na JBIGHW010000003.1 = NZ_JBIGHW010000003.1 Primary Assembly 533238 na NODE_4_length_503177_cov_53.065143 unplaced-scaffold na na JBIGHW010000004.1 = NZ_JBIGHW010000004.1 Primary Assembly 503177 na NODE_5_length_336327_cov_46.654685 unplaced-scaffold na na JBIGHW010000005.1 = NZ_JBIGHW010000005.1 Primary Assembly 336327 na NODE_6_length_325711_cov_57.616858 unplaced-scaffold na na JBIGHW010000006.1 = NZ_JBIGHW010000006.1 Primary Assembly 325711 na NODE_7_length_287209_cov_57.004873 unplaced-scaffold na na JBIGHW010000007.1 = NZ_JBIGHW010000007.1 Primary Assembly 287209 na NODE_8_length_232865_cov_57.860612 unplaced-scaffold na na JBIGHW010000008.1 = NZ_JBIGHW010000008.1 Primary Assembly 232865 na NODE_9_length_199206_cov_59.757604 unplaced-scaffold na na JBIGHW010000009.1 = NZ_JBIGHW010000009.1 Primary Assembly 199206 na NODE_10_length_188142_cov_58.679924 unplaced-scaffold na na JBIGHW010000010.1 = NZ_JBIGHW010000010.1 Primary Assembly 188142 na NODE_11_length_151062_cov_45.973114 unplaced-scaffold na na JBIGHW010000011.1 = NZ_JBIGHW010000011.1 Primary Assembly 151062 na NODE_12_length_148745_cov_55.306242 unplaced-scaffold na na JBIGHW010000012.1 = NZ_JBIGHW010000012.1 Primary Assembly 148745 na NODE_13_length_130548_cov_59.749741 unplaced-scaffold na na JBIGHW010000013.1 = NZ_JBIGHW010000013.1 Primary Assembly 130548 na NODE_14_length_106931_cov_55.749167 unplaced-scaffold na na JBIGHW010000014.1 = NZ_JBIGHW010000014.1 Primary Assembly 106931 na NODE_15_length_93533_cov_62.626502 unplaced-scaffold na na JBIGHW010000015.1 = NZ_JBIGHW010000015.1 Primary Assembly 93533 na NODE_16_length_80896_cov_58.387290 unplaced-scaffold na na JBIGHW010000016.1 = NZ_JBIGHW010000016.1 Primary Assembly 80896 na NODE_17_length_76033_cov_52.289239 unplaced-scaffold na na JBIGHW010000017.1 = NZ_JBIGHW010000017.1 Primary Assembly 76033 na NODE_18_length_65991_cov_50.628841 unplaced-scaffold na na JBIGHW010000018.1 = NZ_JBIGHW010000018.1 Primary Assembly 65991 na NODE_19_length_50328_cov_46.154160 unplaced-scaffold na na JBIGHW010000019.1 = NZ_JBIGHW010000019.1 Primary Assembly 50328 na NODE_20_length_42203_cov_51.650276 unplaced-scaffold na na JBIGHW010000020.1 = NZ_JBIGHW010000020.1 Primary Assembly 42203 na NODE_21_length_36388_cov_62.619729 unplaced-scaffold na na JBIGHW010000021.1 = NZ_JBIGHW010000021.1 Primary Assembly 36388 na NODE_22_length_33877_cov_60.326667 unplaced-scaffold na na JBIGHW010000022.1 = NZ_JBIGHW010000022.1 Primary Assembly 33877 na NODE_23_length_24149_cov_49.406336 unplaced-scaffold na na JBIGHW010000023.1 = NZ_JBIGHW010000023.1 Primary Assembly 24149 na NODE_24_length_18297_cov_66.910292 unplaced-scaffold na na JBIGHW010000024.1 = NZ_JBIGHW010000024.1 Primary Assembly 18297 na NODE_25_length_17182_cov_68.083846 unplaced-scaffold na na JBIGHW010000025.1 = NZ_JBIGHW010000025.1 Primary Assembly 17182 na NODE_26_length_16758_cov_66.433828 unplaced-scaffold na na JBIGHW010000026.1 = NZ_JBIGHW010000026.1 Primary Assembly 16758 na NODE_27_length_13958_cov_50.791989 unplaced-scaffold na na JBIGHW010000027.1 = NZ_JBIGHW010000027.1 Primary Assembly 13958 na NODE_28_length_13504_cov_61.217911 unplaced-scaffold na na JBIGHW010000028.1 = NZ_JBIGHW010000028.1 Primary Assembly 13504 na NODE_29_length_12196_cov_57.605187 unplaced-scaffold na na JBIGHW010000029.1 = NZ_JBIGHW010000029.1 Primary Assembly 12196 na NODE_30_length_8503_cov_61.100764 unplaced-scaffold na na JBIGHW010000030.1 = NZ_JBIGHW010000030.1 Primary Assembly 8503 na NODE_31_length_7381_cov_65.333471 unplaced-scaffold na na JBIGHW010000031.1 = NZ_JBIGHW010000031.1 Primary Assembly 7381 na NODE_32_length_5712_cov_150.281289 unplaced-scaffold na na JBIGHW010000032.1 = NZ_JBIGHW010000032.1 Primary Assembly 5712 na NODE_33_length_4976_cov_60.675397 unplaced-scaffold na na JBIGHW010000033.1 = NZ_JBIGHW010000033.1 Primary Assembly 4976 na NODE_34_length_3465_cov_65.875974 unplaced-scaffold na na JBIGHW010000034.1 = NZ_JBIGHW010000034.1 Primary Assembly 3465 na NODE_35_length_2965_cov_67.829810 unplaced-scaffold na na JBIGHW010000035.1 = NZ_JBIGHW010000035.1 Primary Assembly 2965 na NODE_36_length_2716_cov_54.130166 unplaced-scaffold na na JBIGHW010000036.1 = NZ_JBIGHW010000036.1 Primary Assembly 2716 na NODE_37_length_2708_cov_345.900814 unplaced-scaffold na na JBIGHW010000037.1 = NZ_JBIGHW010000037.1 Primary Assembly 2708 na NODE_38_length_2694_cov_125.241138 unplaced-scaffold na na JBIGHW010000038.1 = NZ_JBIGHW010000038.1 Primary Assembly 2694 na NODE_39_length_2673_cov_62.982718 unplaced-scaffold na na JBIGHW010000039.1 = NZ_JBIGHW010000039.1 Primary Assembly 2673 na NODE_40_length_2583_cov_128.598127 unplaced-scaffold na na JBIGHW010000040.1 = NZ_JBIGHW010000040.1 Primary Assembly 2583 na NODE_41_length_2339_cov_65.766727 unplaced-scaffold na na JBIGHW010000041.1 = NZ_JBIGHW010000041.1 Primary Assembly 2339 na NODE_42_length_2234_cov_108.864262 unplaced-scaffold na na JBIGHW010000042.1 = NZ_JBIGHW010000042.1 Primary Assembly 2234 na NODE_43_length_2128_cov_63.878561 unplaced-scaffold na na JBIGHW010000043.1 = NZ_JBIGHW010000043.1 Primary Assembly 2128 na NODE_44_length_1595_cov_96.817439 unplaced-scaffold na na JBIGHW010000044.1 = NZ_JBIGHW010000044.1 Primary Assembly 1595 na NODE_45_length_1541_cov_60.298444 unplaced-scaffold na na JBIGHW010000045.1 = NZ_JBIGHW010000045.1 Primary Assembly 1541 na NODE_46_length_1383_cov_121.813694 unplaced-scaffold na na JBIGHW010000046.1 = NZ_JBIGHW010000046.1 Primary Assembly 1383 na NODE_47_length_1250_cov_114.210151 unplaced-scaffold na na JBIGHW010000047.1 = NZ_JBIGHW010000047.1 Primary Assembly 1250 na NODE_48_length_1239_cov_99.826439 unplaced-scaffold na na JBIGHW010000048.1 = NZ_JBIGHW010000048.1 Primary Assembly 1239 na NODE_49_length_1138_cov_115.331355 unplaced-scaffold na na JBIGHW010000049.1 = NZ_JBIGHW010000049.1 Primary Assembly 1138 na NODE_50_length_1124_cov_276.868606 unplaced-scaffold na na JBIGHW010000050.1 = NZ_JBIGHW010000050.1 Primary Assembly 1124 na NODE_51_length_1119_cov_438.227823 unplaced-scaffold na na JBIGHW010000051.1 = NZ_JBIGHW010000051.1 Primary Assembly 1119 na NODE_52_length_1110_cov_178.629705 unplaced-scaffold na na JBIGHW010000052.1 = NZ_JBIGHW010000052.1 Primary Assembly 1110 na NODE_53_length_1037_cov_39.229670 unplaced-scaffold na na JBIGHW010000053.1 = NZ_JBIGHW010000053.1 Primary Assembly 1037 na NODE_54_length_955_cov_139.614734 unplaced-scaffold na na JBIGHW010000054.1 = NZ_JBIGHW010000054.1 Primary Assembly 955 na NODE_55_length_918_cov_111.316056 unplaced-scaffold na na JBIGHW010000055.1 = NZ_JBIGHW010000055.1 Primary Assembly 918 na NODE_56_length_787_cov_76.187879 unplaced-scaffold na na JBIGHW010000056.1 = NZ_JBIGHW010000056.1 Primary Assembly 787 na NODE_57_length_780_cov_99.231240 unplaced-scaffold na na JBIGHW010000057.1 = NZ_JBIGHW010000057.1 Primary Assembly 780 na NODE_58_length_689_cov_115.651246 unplaced-scaffold na na JBIGHW010000058.1 = NZ_JBIGHW010000058.1 Primary Assembly 689 na NODE_59_length_684_cov_69.443896 unplaced-scaffold na na JBIGHW010000059.1 = NZ_JBIGHW010000059.1 Primary Assembly 684 na NODE_60_length_618_cov_42.448065 unplaced-scaffold na na JBIGHW010000060.1 = NZ_JBIGHW010000060.1 Primary Assembly 618 na NODE_61_length_521_cov_62.215736 unplaced-scaffold na na JBIGHW010000061.1 = NZ_JBIGHW010000061.1 Primary Assembly 521 na NODE_62_length_470_cov_159.131195 unplaced-scaffold na na JBIGHW010000062.1 = NZ_JBIGHW010000062.1 Primary Assembly 470 na NODE_63_length_430_cov_56.848185 unplaced-scaffold na na JBIGHW010000063.1 = NZ_JBIGHW010000063.1 Primary Assembly 430 na NODE_64_length_416_cov_48.813149 unplaced-scaffold na na JBIGHW010000064.1 = NZ_JBIGHW010000064.1 Primary Assembly 416 na NODE_65_length_394_cov_1.348315 unplaced-scaffold na na JBIGHW010000065.1 = NZ_JBIGHW010000065.1 Primary Assembly 394 na NODE_66_length_375_cov_72.516129 unplaced-scaffold na na JBIGHW010000066.1 = NZ_JBIGHW010000066.1 Primary Assembly 375 na NODE_67_length_372_cov_45.012245 unplaced-scaffold na na JBIGHW010000067.1 = NZ_JBIGHW010000067.1 Primary Assembly 372 na NODE_68_length_366_cov_58.949791 unplaced-scaffold na na JBIGHW010000068.1 = NZ_JBIGHW010000068.1 Primary Assembly 366 na NODE_69_length_352_cov_1.617778 unplaced-scaffold na na JBIGHW010000069.1 = NZ_JBIGHW010000069.1 Primary Assembly 352 na NODE_70_length_339_cov_67.797170 unplaced-scaffold na na JBIGHW010000070.1 = NZ_JBIGHW010000070.1 Primary Assembly 339 na NODE_71_length_336_cov_47.244019 unplaced-scaffold na na JBIGHW010000071.1 = NZ_JBIGHW010000071.1 Primary Assembly 336 na NODE_72_length_331_cov_48.647059 unplaced-scaffold na na JBIGHW010000072.1 = NZ_JBIGHW010000072.1 Primary Assembly 331 na NODE_73_length_319_cov_58.791667 unplaced-scaffold na na JBIGHW010000073.1 = NZ_JBIGHW010000073.1 Primary Assembly 319 na NODE_74_length_318_cov_0.701571 unplaced-scaffold na na JBIGHW010000074.1 = NZ_JBIGHW010000074.1 Primary Assembly 318 na NODE_75_length_314_cov_57.877005 unplaced-scaffold na na JBIGHW010000075.1 = NZ_JBIGHW010000075.1 Primary Assembly 314 na NODE_76_length_306_cov_0.642458 unplaced-scaffold na na JBIGHW010000076.1 = NZ_JBIGHW010000076.1 Primary Assembly 306 na NODE_78_length_290_cov_0.846626 unplaced-scaffold na na JBIGHW010000077.1 = NZ_JBIGHW010000077.1 Primary Assembly 290 na NODE_79_length_288_cov_1.142857 unplaced-scaffold na na JBIGHW010000078.1 = NZ_JBIGHW010000078.1 Primary Assembly 288 na NODE_80_length_288_cov_0.857143 unplaced-scaffold na na JBIGHW010000079.1 = NZ_JBIGHW010000079.1 Primary Assembly 288 na NODE_81_length_285_cov_66.227848 unplaced-scaffold na na JBIGHW010000080.1 = NZ_JBIGHW010000080.1 Primary Assembly 285 na NODE_82_length_284_cov_0.732484 unplaced-scaffold na na JBIGHW010000081.1 = NZ_JBIGHW010000081.1 Primary Assembly 284 na NODE_83_length_283_cov_0.403846 unplaced-scaffold na na JBIGHW010000082.1 = NZ_JBIGHW010000082.1 Primary Assembly 283 na NODE_84_length_281_cov_0.597403 unplaced-scaffold na na JBIGHW010000083.1 = NZ_JBIGHW010000083.1 Primary Assembly 281 na NODE_85_length_274_cov_48.394558 unplaced-scaffold na na JBIGHW010000084.1 = NZ_JBIGHW010000084.1 Primary Assembly 274 na NODE_86_length_267_cov_66.800000 unplaced-scaffold na na JBIGHW010000085.1 = NZ_JBIGHW010000085.1 Primary Assembly 267 na NODE_87_length_267_cov_64.300000 unplaced-scaffold na na JBIGHW010000086.1 = NZ_JBIGHW010000086.1 Primary Assembly 267 na NODE_88_length_255_cov_60.757812 unplaced-scaffold na na JBIGHW010000087.1 = NZ_JBIGHW010000087.1 Primary Assembly 255 na NODE_89_length_255_cov_59.890625 unplaced-scaffold na na JBIGHW010000088.1 = NZ_JBIGHW010000088.1 Primary Assembly 255 na NODE_90_length_255_cov_58.867188 unplaced-scaffold na na JBIGHW010000089.1 = NZ_JBIGHW010000089.1 Primary Assembly 255 na NODE_91_length_255_cov_57.414062 unplaced-scaffold na na JBIGHW010000090.1 = NZ_JBIGHW010000090.1 Primary Assembly 255 na NODE_92_length_255_cov_56.343750 unplaced-scaffold na na JBIGHW010000091.1 = NZ_JBIGHW010000091.1 Primary Assembly 255 na NODE_93_length_255_cov_45.375000 unplaced-scaffold na na JBIGHW010000092.1 = NZ_JBIGHW010000092.1 Primary Assembly 255 na NODE_94_length_255_cov_42.320312 unplaced-scaffold na na JBIGHW010000093.1 = NZ_JBIGHW010000093.1 Primary Assembly 255 na NODE_95_length_255_cov_28.898438 unplaced-scaffold na na JBIGHW010000094.1 = NZ_JBIGHW010000094.1 Primary Assembly 255 na NODE_96_length_253_cov_74.023810 unplaced-scaffold na na JBIGHW010000095.1 = NZ_JBIGHW010000095.1 Primary Assembly 253 na NODE_97_length_252_cov_45.520000 unplaced-scaffold na na JBIGHW010000096.1 = NZ_JBIGHW010000096.1 Primary Assembly 252 na NODE_98_length_241_cov_71.368421 unplaced-scaffold na na JBIGHW010000097.1 = NZ_JBIGHW010000097.1 Primary Assembly 241 na