# Assembly name: ASM4676481v1 # Organism name: Aphanothece stagnina RSMan2012 (cyanobacteria) # Infraspecific name: strain=RSMan2012 # Taxid: 3390205 # BioSample: SAMN46016828 # BioProject: PRJNA1207693 # Submitter: Federal University of Rio Grande # Date: 2025-01-19 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBKOUC01 # Assembly method: Shovill v. 1.0.4 # Expected final version: yes # Genome coverage: 10.0x # Sequencing technology: Illumina MiSeq # GenBank assembly accession: GCA_046764815.1 # RefSeq assembly accession: GCF_046764815.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_046764825.1 GCF_046764825.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig00005 unplaced-scaffold na na JBKOUC010000001.1 = NZ_JBKOUC010000001.1 Primary Assembly 325202 na contig00010 unplaced-scaffold na na JBKOUC010000002.1 = NZ_JBKOUC010000002.1 Primary Assembly 226021 na contig00012 unplaced-scaffold na na JBKOUC010000003.1 = NZ_JBKOUC010000003.1 Primary Assembly 173823 na contig00015 unplaced-scaffold na na JBKOUC010000004.1 = NZ_JBKOUC010000004.1 Primary Assembly 157247 na contig00016 unplaced-scaffold na na JBKOUC010000005.1 = NZ_JBKOUC010000005.1 Primary Assembly 149235 na contig00017 unplaced-scaffold na na JBKOUC010000006.1 = NZ_JBKOUC010000006.1 Primary Assembly 141162 na contig00021 unplaced-scaffold na na JBKOUC010000007.1 = NZ_JBKOUC010000007.1 Primary Assembly 134806 na contig00024 unplaced-scaffold na na JBKOUC010000008.1 = NZ_JBKOUC010000008.1 Primary Assembly 125795 na contig00025 unplaced-scaffold na na JBKOUC010000009.1 = NZ_JBKOUC010000009.1 Primary Assembly 125554 na contig00027 unplaced-scaffold na na JBKOUC010000010.1 = NZ_JBKOUC010000010.1 Primary Assembly 119492 na contig00029 unplaced-scaffold na na JBKOUC010000011.1 = NZ_JBKOUC010000011.1 Primary Assembly 116922 na contig00032 unplaced-scaffold na na JBKOUC010000012.1 = NZ_JBKOUC010000012.1 Primary Assembly 113701 na contig00035 unplaced-scaffold na na JBKOUC010000013.1 = NZ_JBKOUC010000013.1 Primary Assembly 109545 na contig00036 unplaced-scaffold na na JBKOUC010000014.1 = NZ_JBKOUC010000014.1 Primary Assembly 109075 na contig00039 unplaced-scaffold na na JBKOUC010000015.1 = NZ_JBKOUC010000015.1 Primary Assembly 83382 na contig00043 unplaced-scaffold na na JBKOUC010000016.1 = NZ_JBKOUC010000016.1 Primary Assembly 75574 na contig00046 unplaced-scaffold na na JBKOUC010000017.1 = NZ_JBKOUC010000017.1 Primary Assembly 73073 na contig00047 unplaced-scaffold na na JBKOUC010000018.1 = NZ_JBKOUC010000018.1 Primary Assembly 68564 na contig00049 unplaced-scaffold na na JBKOUC010000019.1 = NZ_JBKOUC010000019.1 Primary Assembly 65988 na contig00060 unplaced-scaffold na na JBKOUC010000020.1 = NZ_JBKOUC010000020.1 Primary Assembly 56046 na contig00066 unplaced-scaffold na na JBKOUC010000021.1 = NZ_JBKOUC010000021.1 Primary Assembly 51626 na contig00069 unplaced-scaffold na na JBKOUC010000022.1 = NZ_JBKOUC010000022.1 Primary Assembly 50094 na contig00070 unplaced-scaffold na na JBKOUC010000023.1 = NZ_JBKOUC010000023.1 Primary Assembly 47809 na contig00074 unplaced-scaffold na na JBKOUC010000024.1 = NZ_JBKOUC010000024.1 Primary Assembly 44638 na contig00076 unplaced-scaffold na na JBKOUC010000025.1 = NZ_JBKOUC010000025.1 Primary Assembly 44335 na contig00087 unplaced-scaffold na na JBKOUC010000026.1 = NZ_JBKOUC010000026.1 Primary Assembly 34732 na contig00092 unplaced-scaffold na na JBKOUC010000027.1 = NZ_JBKOUC010000027.1 Primary Assembly 33491 na contig00113 unplaced-scaffold na na JBKOUC010000028.1 = NZ_JBKOUC010000028.1 Primary Assembly 27268 na contig00114 unplaced-scaffold na na JBKOUC010000029.1 = NZ_JBKOUC010000029.1 Primary Assembly 27092 na contig00126 unplaced-scaffold na na JBKOUC010000030.1 = NZ_JBKOUC010000030.1 Primary Assembly 23813 na contig00131 unplaced-scaffold na na JBKOUC010000031.1 = NZ_JBKOUC010000031.1 Primary Assembly 22564 na contig00144 unplaced-scaffold na na JBKOUC010000032.1 = NZ_JBKOUC010000032.1 Primary Assembly 19872 na contig00146 unplaced-scaffold na na JBKOUC010000033.1 = NZ_JBKOUC010000033.1 Primary Assembly 19662 na contig00157 unplaced-scaffold na na JBKOUC010000034.1 = NZ_JBKOUC010000034.1 Primary Assembly 18927 na contig00163 unplaced-scaffold na na JBKOUC010000035.1 = NZ_JBKOUC010000035.1 Primary Assembly 17469 na contig00177 unplaced-scaffold na na JBKOUC010000036.1 = NZ_JBKOUC010000036.1 Primary Assembly 15470 na contig00206 unplaced-scaffold na na JBKOUC010000037.1 = NZ_JBKOUC010000037.1 Primary Assembly 12064 na contig00211 unplaced-scaffold na na JBKOUC010000038.1 = NZ_JBKOUC010000038.1 Primary Assembly 11639 na contig00213 unplaced-scaffold na na JBKOUC010000039.1 = NZ_JBKOUC010000039.1 Primary Assembly 11487 na contig00215 unplaced-scaffold na na JBKOUC010000040.1 = NZ_JBKOUC010000040.1 Primary Assembly 11410 na contig00226 unplaced-scaffold na na JBKOUC010000041.1 = NZ_JBKOUC010000041.1 Primary Assembly 10559 na contig00227 unplaced-scaffold na na JBKOUC010000042.1 = NZ_JBKOUC010000042.1 Primary Assembly 10557 na contig00230 unplaced-scaffold na na JBKOUC010000043.1 = NZ_JBKOUC010000043.1 Primary Assembly 10351 na contig00232 unplaced-scaffold na na JBKOUC010000044.1 = NZ_JBKOUC010000044.1 Primary Assembly 10110 na contig00242 unplaced-scaffold na na JBKOUC010000045.1 = NZ_JBKOUC010000045.1 Primary Assembly 9383 na contig00249 unplaced-scaffold na na JBKOUC010000046.1 = NZ_JBKOUC010000046.1 Primary Assembly 8976 na contig00250 unplaced-scaffold na na JBKOUC010000047.1 = NZ_JBKOUC010000047.1 Primary Assembly 8830 na contig00257 unplaced-scaffold na na JBKOUC010000048.1 = NZ_JBKOUC010000048.1 Primary Assembly 7750 na contig00279 unplaced-scaffold na na JBKOUC010000049.1 = NZ_JBKOUC010000049.1 Primary Assembly 6131 na contig00288 unplaced-scaffold na na JBKOUC010000050.1 = NZ_JBKOUC010000050.1 Primary Assembly 5674 na contig00293 unplaced-scaffold na na JBKOUC010000051.1 = NZ_JBKOUC010000051.1 Primary Assembly 4973 na contig00296 unplaced-scaffold na na JBKOUC010000052.1 = NZ_JBKOUC010000052.1 Primary Assembly 4771 na contig00300 unplaced-scaffold na na JBKOUC010000053.1 = NZ_JBKOUC010000053.1 Primary Assembly 4576 na contig00302 unplaced-scaffold na na JBKOUC010000054.1 = NZ_JBKOUC010000054.1 Primary Assembly 4427 na contig00303 unplaced-scaffold na na JBKOUC010000055.1 = NZ_JBKOUC010000055.1 Primary Assembly 4389 na contig00313 unplaced-scaffold na na JBKOUC010000056.1 = NZ_JBKOUC010000056.1 Primary Assembly 3970 na contig00319 unplaced-scaffold na na JBKOUC010000057.1 = NZ_JBKOUC010000057.1 Primary Assembly 3429 na contig00320 unplaced-scaffold na na JBKOUC010000058.1 = NZ_JBKOUC010000058.1 Primary Assembly 3351 na contig00322 unplaced-scaffold na na JBKOUC010000059.1 = NZ_JBKOUC010000059.1 Primary Assembly 3192 na contig00326 unplaced-scaffold na na JBKOUC010000060.1 = NZ_JBKOUC010000060.1 Primary Assembly 2741 na contig00331 unplaced-scaffold na na JBKOUC010000061.1 = NZ_JBKOUC010000061.1 Primary Assembly 2375 na contig00332 unplaced-scaffold na na JBKOUC010000062.1 = NZ_JBKOUC010000062.1 Primary Assembly 2281 na contig00341 unplaced-scaffold na na JBKOUC010000063.1 = NZ_JBKOUC010000063.1 Primary Assembly 1605 na contig00343 unplaced-scaffold na na JBKOUC010000064.1 = NZ_JBKOUC010000064.1 Primary Assembly 1528 na contig00344 unplaced-scaffold na na JBKOUC010000065.1 = NZ_JBKOUC010000065.1 Primary Assembly 1518 na contig00346 unplaced-scaffold na na JBKOUC010000066.1 = NZ_JBKOUC010000066.1 Primary Assembly 1323 na contig00347 unplaced-scaffold na na JBKOUC010000067.1 = NZ_JBKOUC010000067.1 Primary Assembly 1318 na contig00348 unplaced-scaffold na na JBKOUC010000068.1 = NZ_JBKOUC010000068.1 Primary Assembly 1269 na contig00349 unplaced-scaffold na na JBKOUC010000069.1 = NZ_JBKOUC010000069.1 Primary Assembly 1236 na contig00351 unplaced-scaffold na na JBKOUC010000070.1 = NZ_JBKOUC010000070.1 Primary Assembly 1169 na contig00352 unplaced-scaffold na na JBKOUC010000071.1 = NZ_JBKOUC010000071.1 Primary Assembly 1123 na contig00355 unplaced-scaffold na na JBKOUC010000072.1 = NZ_JBKOUC010000072.1 Primary Assembly 1044 na contig00356 unplaced-scaffold na na JBKOUC010000073.1 = NZ_JBKOUC010000073.1 Primary Assembly 1032 na contig00357 unplaced-scaffold na na JBKOUC010000074.1 = NZ_JBKOUC010000074.1 Primary Assembly 1021 na contig00358 unplaced-scaffold na na JBKOUC010000075.1 = NZ_JBKOUC010000075.1 Primary Assembly 950 na contig00360 unplaced-scaffold na na JBKOUC010000076.1 = NZ_JBKOUC010000076.1 Primary Assembly 895 na contig00361 unplaced-scaffold na na JBKOUC010000077.1 = NZ_JBKOUC010000077.1 Primary Assembly 887 na contig00362 unplaced-scaffold na na JBKOUC010000078.1 = NZ_JBKOUC010000078.1 Primary Assembly 828 na contig00364 unplaced-scaffold na na JBKOUC010000079.1 = NZ_JBKOUC010000079.1 Primary Assembly 781 na contig00366 unplaced-scaffold na na JBKOUC010000080.1 = NZ_JBKOUC010000080.1 Primary Assembly 760 na contig00368 unplaced-scaffold na na JBKOUC010000081.1 = NZ_JBKOUC010000081.1 Primary Assembly 740 na contig00372 unplaced-scaffold na na JBKOUC010000082.1 = NZ_JBKOUC010000082.1 Primary Assembly 729 na contig00373 unplaced-scaffold na na JBKOUC010000083.1 = NZ_JBKOUC010000083.1 Primary Assembly 721 na contig00376 unplaced-scaffold na na JBKOUC010000084.1 = NZ_JBKOUC010000084.1 Primary Assembly 648 na contig00377 unplaced-scaffold na na JBKOUC010000085.1 = NZ_JBKOUC010000085.1 Primary Assembly 639 na contig00378 unplaced-scaffold na na JBKOUC010000086.1 = NZ_JBKOUC010000086.1 Primary Assembly 636 na contig00379 unplaced-scaffold na na JBKOUC010000087.1 = NZ_JBKOUC010000087.1 Primary Assembly 585 na contig00380 unplaced-scaffold na na JBKOUC010000088.1 = NZ_JBKOUC010000088.1 Primary Assembly 577 na contig00381 unplaced-scaffold na na JBKOUC010000089.1 = NZ_JBKOUC010000089.1 Primary Assembly 575 na contig00383 unplaced-scaffold na na JBKOUC010000090.1 = NZ_JBKOUC010000090.1 Primary Assembly 563 na contig00384 unplaced-scaffold na na JBKOUC010000091.1 = NZ_JBKOUC010000091.1 Primary Assembly 559 na contig00385 unplaced-scaffold na na JBKOUC010000092.1 = NZ_JBKOUC010000092.1 Primary Assembly 548 na contig00386 unplaced-scaffold na na JBKOUC010000093.1 = NZ_JBKOUC010000093.1 Primary Assembly 533 na contig00387 unplaced-scaffold na na JBKOUC010000094.1 = NZ_JBKOUC010000094.1 Primary Assembly 524 na contig00388 unplaced-scaffold na na JBKOUC010000095.1 = NZ_JBKOUC010000095.1 Primary Assembly 518 na contig00389 unplaced-scaffold na na JBKOUC010000096.1 = NZ_JBKOUC010000096.1 Primary Assembly 517 na contig00390 unplaced-scaffold na na JBKOUC010000097.1 = NZ_JBKOUC010000097.1 Primary Assembly 517 na contig00392 unplaced-scaffold na na JBKOUC010000098.1 = NZ_JBKOUC010000098.1 Primary Assembly 502 na contig00393 unplaced-scaffold na na JBKOUC010000099.1 = NZ_JBKOUC010000099.1 Primary Assembly 498 na contig00394 unplaced-scaffold na na JBKOUC010000100.1 = NZ_JBKOUC010000100.1 Primary Assembly 492 na contig00395 unplaced-scaffold na na JBKOUC010000101.1 = NZ_JBKOUC010000101.1 Primary Assembly 490 na contig00396 unplaced-scaffold na na JBKOUC010000102.1 = NZ_JBKOUC010000102.1 Primary Assembly 482 na contig00397 unplaced-scaffold na na JBKOUC010000103.1 = NZ_JBKOUC010000103.1 Primary Assembly 463 na contig00398 unplaced-scaffold na na JBKOUC010000104.1 = NZ_JBKOUC010000104.1 Primary Assembly 462 na contig00399 unplaced-scaffold na na JBKOUC010000105.1 = NZ_JBKOUC010000105.1 Primary Assembly 454 na contig00400 unplaced-scaffold na na JBKOUC010000106.1 = NZ_JBKOUC010000106.1 Primary Assembly 454 na contig00401 unplaced-scaffold na na JBKOUC010000107.1 = NZ_JBKOUC010000107.1 Primary Assembly 454 na contig00404 unplaced-scaffold na na JBKOUC010000108.1 = NZ_JBKOUC010000108.1 Primary Assembly 440 na contig00405 unplaced-scaffold na na JBKOUC010000109.1 = NZ_JBKOUC010000109.1 Primary Assembly 436 na contig00406 unplaced-scaffold na na JBKOUC010000110.1 = NZ_JBKOUC010000110.1 Primary Assembly 435 na contig00407 unplaced-scaffold na na JBKOUC010000111.1 = NZ_JBKOUC010000111.1 Primary Assembly 435 na contig00408 unplaced-scaffold na na JBKOUC010000112.1 = NZ_JBKOUC010000112.1 Primary Assembly 434 na contig00409 unplaced-scaffold na na JBKOUC010000113.1 = NZ_JBKOUC010000113.1 Primary Assembly 429 na contig00410 unplaced-scaffold na na JBKOUC010000114.1 = NZ_JBKOUC010000114.1 Primary Assembly 423 na contig00411 unplaced-scaffold na na JBKOUC010000115.1 = NZ_JBKOUC010000115.1 Primary Assembly 422 na contig00412 unplaced-scaffold na na JBKOUC010000116.1 = NZ_JBKOUC010000116.1 Primary Assembly 420 na contig00414 unplaced-scaffold na na JBKOUC010000117.1 = NZ_JBKOUC010000117.1 Primary Assembly 407 na contig00415 unplaced-scaffold na na JBKOUC010000118.1 = NZ_JBKOUC010000118.1 Primary Assembly 407 na contig00416 unplaced-scaffold na na JBKOUC010000119.1 = NZ_JBKOUC010000119.1 Primary Assembly 400 na contig00417 unplaced-scaffold na na JBKOUC010000120.1 = NZ_JBKOUC010000120.1 Primary Assembly 396 na contig00418 unplaced-scaffold na na JBKOUC010000121.1 = NZ_JBKOUC010000121.1 Primary Assembly 393 na contig00420 unplaced-scaffold na na JBKOUC010000122.1 = NZ_JBKOUC010000122.1 Primary Assembly 387 na contig00421 unplaced-scaffold na na JBKOUC010000123.1 = NZ_JBKOUC010000123.1 Primary Assembly 386 na contig00422 unplaced-scaffold na na JBKOUC010000124.1 = NZ_JBKOUC010000124.1 Primary Assembly 381 na contig00424 unplaced-scaffold na na JBKOUC010000125.1 = NZ_JBKOUC010000125.1 Primary Assembly 339 na contig00425 unplaced-scaffold na na JBKOUC010000126.1 = NZ_JBKOUC010000126.1 Primary Assembly 333 na contig00426 unplaced-scaffold na na JBKOUC010000127.1 = NZ_JBKOUC010000127.1 Primary Assembly 333 na contig00427 unplaced-scaffold na na JBKOUC010000128.1 = NZ_JBKOUC010000128.1 Primary Assembly 328 na contig00428 unplaced-scaffold na na JBKOUC010000129.1 = NZ_JBKOUC010000129.1 Primary Assembly 316 na contig00429 unplaced-scaffold na na JBKOUC010000130.1 = NZ_JBKOUC010000130.1 Primary Assembly 309 na contig00430 unplaced-scaffold na na JBKOUC010000131.1 = NZ_JBKOUC010000131.1 Primary Assembly 283 na contig00431 unplaced-scaffold na na JBKOUC010000132.1 = NZ_JBKOUC010000132.1 Primary Assembly 276 na contig00432 unplaced-scaffold na na JBKOUC010000133.1 = NZ_JBKOUC010000133.1 Primary Assembly 274 na contig00433 unplaced-scaffold na na JBKOUC010000134.1 = NZ_JBKOUC010000134.1 Primary Assembly 261 na contig00434 unplaced-scaffold na na JBKOUC010000135.1 = NZ_JBKOUC010000135.1 Primary Assembly 249 na contig00435 unplaced-scaffold na na JBKOUC010000136.1 = NZ_JBKOUC010000136.1 Primary Assembly 242 na contig00436 unplaced-scaffold na na JBKOUC010000137.1 = NZ_JBKOUC010000137.1 Primary Assembly 223 na contig00438 unplaced-scaffold na na JBKOUC010000138.1 = NZ_JBKOUC010000138.1 Primary Assembly 223 na contig00439 unplaced-scaffold na na JBKOUC010000139.1 = NZ_JBKOUC010000139.1 Primary Assembly 223 na contig00440 unplaced-scaffold na na JBKOUC010000140.1 = NZ_JBKOUC010000140.1 Primary Assembly 223 na contig00442 unplaced-scaffold na na JBKOUC010000141.1 = NZ_JBKOUC010000141.1 Primary Assembly 223 na contig00443 unplaced-scaffold na na JBKOUC010000142.1 = NZ_JBKOUC010000142.1 Primary Assembly 222 na contig00444 unplaced-scaffold na na JBKOUC010000143.1 = NZ_JBKOUC010000143.1 Primary Assembly 221 na contig00445 unplaced-scaffold na na JBKOUC010000144.1 = NZ_JBKOUC010000144.1 Primary Assembly 220 na contig00446 unplaced-scaffold na na JBKOUC010000145.1 = NZ_JBKOUC010000145.1 Primary Assembly 218 na contig00447 unplaced-scaffold na na JBKOUC010000146.1 = NZ_JBKOUC010000146.1 Primary Assembly 211 na contig00448 unplaced-scaffold na na JBKOUC010000147.1 = NZ_JBKOUC010000147.1 Primary Assembly 211 na contig00449 unplaced-scaffold na na JBKOUC010000148.1 = NZ_JBKOUC010000148.1 Primary Assembly 207 na contig00450 unplaced-scaffold na na JBKOUC010000149.1 = NZ_JBKOUC010000149.1 Primary Assembly 205 na contig00451 unplaced-scaffold na na JBKOUC010000150.1 = NZ_JBKOUC010000150.1 Primary Assembly 204 na contig00452 unplaced-scaffold na na JBKOUC010000151.1 = NZ_JBKOUC010000151.1 Primary Assembly 204 na contig00453 unplaced-scaffold na na JBKOUC010000152.1 = NZ_JBKOUC010000152.1 Primary Assembly 201 na contig00454 unplaced-scaffold na na JBKOUC010000153.1 = NZ_JBKOUC010000153.1 Primary Assembly 200 na