# Assembly name: ASM5000362v1 # Organism name: Haematobia irritans (horn fly) # Isolate: KBUSLIRL # Taxid: 7368 # BioSample: SAMN47512679 # BioProject: PRJNA1239389 # Submitter: USDA-Agricultural Research Service, USA # Date: 2025-04-29 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBNFPT01 # Assembly method: HiFiasm v. 0.19.9-r616 # Expected final version: yes # Genome coverage: 16.0x # Sequencing technology: Illumina NovaSeq; PacBio Sequel IIe; PacBio Revio # RefSeq category: Reference Genome # GenBank assembly accession: GCA_050003625.1 # RefSeq assembly accession: GCF_050003625.1 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_050003645.1 GCF_050003645.1 Primary Assembly ## GCF_051295035.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1 assembled-molecule 1 Chromosome CM113865.1 = NC_134397.1 Primary Assembly 281474430 na scaffold_2 assembled-molecule 2 Chromosome CM113866.1 = NC_134398.1 Primary Assembly 236150064 na scaffold_3 assembled-molecule 3 Chromosome CM113867.1 = NC_134399.1 Primary Assembly 233246307 na scaffold_4 assembled-molecule 4 Chromosome CM113868.1 = NC_134400.1 Primary Assembly 227894268 na scaffold_5 assembled-molecule 5 Chromosome CM113869.1 = NC_134401.1 Primary Assembly 176568204 na scaffold_6 unplaced-scaffold na na JBNFPT010000006.1 = NW_027445819.1 Primary Assembly 1158303 na scaffold_7 unplaced-scaffold na na JBNFPT010000007.1 = NW_027445830.1 Primary Assembly 1655867 na scaffold_8 unplaced-scaffold na na JBNFPT010000008.1 = NW_027445841.1 Primary Assembly 1071289 na scaffold_9 unplaced-scaffold na na JBNFPT010000009.1 = NW_027445852.1 Primary Assembly 1266639 na scaffold_10 unplaced-scaffold na na JBNFPT010000010.1 = NW_027445688.1 Primary Assembly 1181686 na scaffold_11 unplaced-scaffold na na JBNFPT010000011.1 = NW_027445699.1 Primary Assembly 836532 na scaffold_12 unplaced-scaffold na na JBNFPT010000012.1 = NW_027445710.1 Primary Assembly 816340 na scaffold_13 unplaced-scaffold na na JBNFPT010000013.1 = NW_027445720.1 Primary Assembly 565402 na scaffold_14 unplaced-scaffold na na JBNFPT010000014.1 = NW_027445731.1 Primary Assembly 410847 na scaffold_15 unplaced-scaffold na na JBNFPT010000015.1 = NW_027445742.1 Primary Assembly 410657 na scaffold_16 unplaced-scaffold na na JBNFPT010000016.1 = NW_027445753.1 Primary Assembly 407505 na scaffold_17 unplaced-scaffold na na JBNFPT010000017.1 = NW_027445764.1 Primary Assembly 351754 na scaffold_18 unplaced-scaffold na na JBNFPT010000018.1 = NW_027445775.1 Primary Assembly 313467 na scaffold_19 unplaced-scaffold na na JBNFPT010000019.1 = NW_027445778.1 Primary Assembly 291929 na scaffold_20 unplaced-scaffold na na JBNFPT010000020.1 = NW_027445779.1 Primary Assembly 229170 na scaffold_21 unplaced-scaffold na na JBNFPT010000021.1 = NW_027445780.1 Primary Assembly 206683 na scaffold_22 unplaced-scaffold na na JBNFPT010000022.1 = NW_027445781.1 Primary Assembly 46591 na scaffold_23 unplaced-scaffold na na JBNFPT010000023.1 = NW_027445782.1 Primary Assembly 131895 na scaffold_24 unplaced-scaffold na na JBNFPT010000024.1 = NW_027445783.1 Primary Assembly 108217 na scaffold_25 unplaced-scaffold na na JBNFPT010000025.1 = NW_027445784.1 Primary Assembly 105237 na scaffold_26 unplaced-scaffold na na JBNFPT010000026.1 = NW_027445785.1 Primary Assembly 105212 na scaffold_27 unplaced-scaffold na na JBNFPT010000027.1 = NW_027445786.1 Primary Assembly 100408 na scaffold_28 unplaced-scaffold na na JBNFPT010000028.1 = NW_027445787.1 Primary Assembly 88087 na scaffold_29 unplaced-scaffold na na JBNFPT010000029.1 = NW_027445788.1 Primary Assembly 86253 na scaffold_30 unplaced-scaffold na na JBNFPT010000030.1 = NW_027445789.1 Primary Assembly 85099 na scaffold_31 unplaced-scaffold na na JBNFPT010000031.1 = NW_027445790.1 Primary Assembly 83508 na scaffold_32 unplaced-scaffold na na JBNFPT010000032.1 = NW_027445791.1 Primary Assembly 83168 na scaffold_33 unplaced-scaffold na na JBNFPT010000033.1 = NW_027445792.1 Primary Assembly 81059 na scaffold_34 unplaced-scaffold na na JBNFPT010000034.1 = NW_027445793.1 Primary Assembly 78729 na scaffold_35 unplaced-scaffold na na JBNFPT010000035.1 = NW_027445794.1 Primary Assembly 78388 na scaffold_36 unplaced-scaffold na na JBNFPT010000036.1 = NW_027445795.1 Primary Assembly 76722 na scaffold_37 unplaced-scaffold na na JBNFPT010000037.1 = NW_027445796.1 Primary Assembly 74762 na scaffold_38 unplaced-scaffold na na JBNFPT010000038.1 = NW_027445797.1 Primary Assembly 73613 na scaffold_39 unplaced-scaffold na na JBNFPT010000039.1 = NW_027445798.1 Primary Assembly 68638 na scaffold_40 unplaced-scaffold na na JBNFPT010000040.1 = NW_027445799.1 Primary Assembly 68401 na scaffold_41 unplaced-scaffold na na JBNFPT010000041.1 = NW_027445800.1 Primary Assembly 67802 na scaffold_42 unplaced-scaffold na na JBNFPT010000042.1 = NW_027445801.1 Primary Assembly 66386 na scaffold_43 unplaced-scaffold na na JBNFPT010000043.1 = NW_027445802.1 Primary Assembly 65143 na scaffold_44 unplaced-scaffold na na JBNFPT010000044.1 = NW_027445803.1 Primary Assembly 63706 na scaffold_45 unplaced-scaffold na na JBNFPT010000045.1 = NW_027445804.1 Primary Assembly 62507 na scaffold_46 unplaced-scaffold na na JBNFPT010000046.1 = NW_027445805.1 Primary Assembly 62120 na scaffold_47 unplaced-scaffold na na JBNFPT010000047.1 = NW_027445806.1 Primary Assembly 59645 na scaffold_48 unplaced-scaffold na na JBNFPT010000048.1 = NW_027445807.1 Primary Assembly 55533 na scaffold_49 unplaced-scaffold na na JBNFPT010000049.1 = NW_027445808.1 Primary Assembly 52899 na scaffold_50 unplaced-scaffold na na JBNFPT010000050.1 = NW_027445809.1 Primary Assembly 51810 na scaffold_51 unplaced-scaffold na na JBNFPT010000051.1 = NW_027445810.1 Primary Assembly 51427 na scaffold_52 unplaced-scaffold na na JBNFPT010000052.1 = NW_027445811.1 Primary Assembly 51069 na scaffold_53 unplaced-scaffold na na JBNFPT010000053.1 = NW_027445812.1 Primary Assembly 48810 na scaffold_54 unplaced-scaffold na na JBNFPT010000054.1 = NW_027445813.1 Primary Assembly 47225 na scaffold_55 unplaced-scaffold na na JBNFPT010000055.1 = NW_027445814.1 Primary Assembly 46080 na scaffold_56 unplaced-scaffold na na JBNFPT010000056.1 = NW_027445815.1 Primary Assembly 45978 na scaffold_57 unplaced-scaffold na na JBNFPT010000057.1 = NW_027445816.1 Primary Assembly 45132 na scaffold_58 unplaced-scaffold na na JBNFPT010000058.1 = NW_027445817.1 Primary Assembly 42914 na scaffold_59 unplaced-scaffold na na JBNFPT010000059.1 = NW_027445818.1 Primary Assembly 42623 na scaffold_60 unplaced-scaffold na na JBNFPT010000060.1 = NW_027445820.1 Primary Assembly 41454 na scaffold_61 unplaced-scaffold na na JBNFPT010000061.1 = NW_027445821.1 Primary Assembly 41009 na scaffold_62 unplaced-scaffold na na JBNFPT010000062.1 = NW_027445822.1 Primary Assembly 40574 na scaffold_63 unplaced-scaffold na na JBNFPT010000063.1 = NW_027445823.1 Primary Assembly 39742 na scaffold_64 unplaced-scaffold na na JBNFPT010000064.1 = NW_027445824.1 Primary Assembly 37520 na scaffold_65 unplaced-scaffold na na JBNFPT010000065.1 = NW_027445825.1 Primary Assembly 37250 na scaffold_66 unplaced-scaffold na na JBNFPT010000066.1 = NW_027445826.1 Primary Assembly 36843 na scaffold_67 unplaced-scaffold na na JBNFPT010000067.1 = NW_027445827.1 Primary Assembly 36413 na scaffold_68 unplaced-scaffold na na JBNFPT010000068.1 = NW_027445828.1 Primary Assembly 35545 na scaffold_69 unplaced-scaffold na na JBNFPT010000069.1 = NW_027445829.1 Primary Assembly 35465 na scaffold_70 unplaced-scaffold na na JBNFPT010000070.1 = NW_027445831.1 Primary Assembly 33287 na scaffold_71 unplaced-scaffold na na JBNFPT010000071.1 = NW_027445832.1 Primary Assembly 32714 na scaffold_72 unplaced-scaffold na na JBNFPT010000072.1 = NW_027445833.1 Primary Assembly 32512 na scaffold_73 unplaced-scaffold na na JBNFPT010000073.1 = NW_027445834.1 Primary Assembly 32430 na scaffold_74 unplaced-scaffold na na JBNFPT010000074.1 = NW_027445835.1 Primary Assembly 31492 na scaffold_75 unplaced-scaffold na na JBNFPT010000075.1 = NW_027445836.1 Primary Assembly 30651 na scaffold_76 unplaced-scaffold na na JBNFPT010000076.1 = NW_027445837.1 Primary Assembly 30577 na scaffold_77 unplaced-scaffold na na JBNFPT010000077.1 = NW_027445838.1 Primary Assembly 30493 na scaffold_78 unplaced-scaffold na na JBNFPT010000078.1 = NW_027445839.1 Primary Assembly 29570 na scaffold_79 unplaced-scaffold na na JBNFPT010000079.1 = NW_027445840.1 Primary Assembly 28996 na scaffold_80 unplaced-scaffold na na JBNFPT010000080.1 = NW_027445842.1 Primary Assembly 27698 na scaffold_81 unplaced-scaffold na na JBNFPT010000081.1 = NW_027445843.1 Primary Assembly 27511 na scaffold_82 unplaced-scaffold na na JBNFPT010000082.1 = NW_027445844.1 Primary Assembly 27391 na scaffold_83 unplaced-scaffold na na JBNFPT010000083.1 = NW_027445845.1 Primary Assembly 27017 na scaffold_84 unplaced-scaffold na na JBNFPT010000084.1 = NW_027445846.1 Primary Assembly 26499 na scaffold_85 unplaced-scaffold na na JBNFPT010000085.1 = NW_027445847.1 Primary Assembly 25907 na scaffold_86 unplaced-scaffold na na JBNFPT010000086.1 = NW_027445848.1 Primary Assembly 25867 na scaffold_87 unplaced-scaffold na na JBNFPT010000087.1 = NW_027445849.1 Primary Assembly 25140 na scaffold_88 unplaced-scaffold na na JBNFPT010000088.1 = NW_027445850.1 Primary Assembly 24537 na scaffold_89 unplaced-scaffold na na JBNFPT010000089.1 = NW_027445851.1 Primary Assembly 24154 na scaffold_90 unplaced-scaffold na na JBNFPT010000090.1 = NW_027445853.1 Primary Assembly 23871 na scaffold_91 unplaced-scaffold na na JBNFPT010000091.1 = NW_027445854.1 Primary Assembly 23657 na scaffold_92 unplaced-scaffold na na JBNFPT010000092.1 = NW_027445855.1 Primary Assembly 23293 na scaffold_93 unplaced-scaffold na na JBNFPT010000093.1 = NW_027445856.1 Primary Assembly 23278 na scaffold_94 unplaced-scaffold na na JBNFPT010000094.1 = NW_027445857.1 Primary Assembly 23270 na scaffold_95 unplaced-scaffold na na JBNFPT010000095.1 = NW_027445858.1 Primary Assembly 23026 na scaffold_96 unplaced-scaffold na na JBNFPT010000096.1 = NW_027445859.1 Primary Assembly 22549 na scaffold_97 unplaced-scaffold na na JBNFPT010000097.1 = NW_027445860.1 Primary Assembly 22073 na scaffold_98 unplaced-scaffold na na JBNFPT010000098.1 = NW_027445861.1 Primary Assembly 21715 na scaffold_99 unplaced-scaffold na na JBNFPT010000099.1 = NW_027445862.1 Primary Assembly 21585 na scaffold_100 unplaced-scaffold na na JBNFPT010000100.1 = NW_027445689.1 Primary Assembly 21494 na scaffold_101 unplaced-scaffold na na JBNFPT010000101.1 = NW_027445690.1 Primary Assembly 21022 na scaffold_102 unplaced-scaffold na na JBNFPT010000102.1 = NW_027445691.1 Primary Assembly 20947 na scaffold_103 unplaced-scaffold na na JBNFPT010000103.1 = NW_027445692.1 Primary Assembly 20140 na scaffold_104 unplaced-scaffold na na JBNFPT010000104.1 = NW_027445693.1 Primary Assembly 19893 na scaffold_105 unplaced-scaffold na na JBNFPT010000105.1 = NW_027445694.1 Primary Assembly 19742 na scaffold_106 unplaced-scaffold na na JBNFPT010000106.1 = NW_027445695.1 Primary Assembly 19627 na scaffold_107 unplaced-scaffold na na JBNFPT010000107.1 = NW_027445696.1 Primary Assembly 19428 na scaffold_108 unplaced-scaffold na na JBNFPT010000108.1 = NW_027445697.1 Primary Assembly 19237 na scaffold_109 unplaced-scaffold na na JBNFPT010000109.1 = NW_027445698.1 Primary Assembly 18842 na scaffold_110 unplaced-scaffold na na JBNFPT010000110.1 = NW_027445700.1 Primary Assembly 18816 na scaffold_111 unplaced-scaffold na na JBNFPT010000111.1 = NW_027445701.1 Primary Assembly 17823 na scaffold_112 unplaced-scaffold na na JBNFPT010000112.1 = NW_027445702.1 Primary Assembly 17581 na scaffold_113 unplaced-scaffold na na JBNFPT010000113.1 = NW_027445703.1 Primary Assembly 17574 na scaffold_114 unplaced-scaffold na na JBNFPT010000114.1 = NW_027445704.1 Primary Assembly 17495 na scaffold_115 unplaced-scaffold na na JBNFPT010000115.1 = NW_027445705.1 Primary Assembly 17033 na scaffold_116 unplaced-scaffold na na JBNFPT010000116.1 = NW_027445706.1 Primary Assembly 16156 na scaffold_117 unplaced-scaffold na na JBNFPT010000117.1 = NW_027445707.1 Primary Assembly 16005 na scaffold_118 unplaced-scaffold na na JBNFPT010000118.1 = NW_027445708.1 Primary Assembly 15974 na scaffold_119 unplaced-scaffold na na JBNFPT010000119.1 = NW_027445709.1 Primary Assembly 15732 na scaffold_120 unplaced-scaffold na na JBNFPT010000120.1 = NW_027445711.1 Primary Assembly 15407 na scaffold_121 unplaced-scaffold na na JBNFPT010000121.1 = NW_027445712.1 Primary Assembly 14660 na scaffold_122 unplaced-scaffold na na JBNFPT010000122.1 = NW_027445713.1 Primary Assembly 13294 na scaffold_123 unplaced-scaffold na na JBNFPT010000123.1 = NW_027445714.1 Primary Assembly 12654 na scaffold_124 unplaced-scaffold na na JBNFPT010000124.1 = NW_027445715.1 Primary Assembly 12287 na scaffold_125 unplaced-scaffold na na JBNFPT010000125.1 = NW_027445716.1 Primary Assembly 11912 na scaffold_126 unplaced-scaffold na na JBNFPT010000126.1 = NW_027445717.1 Primary Assembly 11734 na scaffold_128 unplaced-scaffold na na JBNFPT010000127.1 = NW_027445718.1 Primary Assembly 3000 na scaffold_129 unplaced-scaffold na na JBNFPT010000128.1 = NW_027445719.1 Primary Assembly 8000 na scaffold_130 unplaced-scaffold na na JBNFPT010000129.1 = NW_027445721.1 Primary Assembly 8000 na scaffold_131 unplaced-scaffold na na JBNFPT010000130.1 = NW_027445722.1 Primary Assembly 10000 na scaffold_132 unplaced-scaffold na na JBNFPT010000131.1 = NW_027445723.1 Primary Assembly 10000 na scaffold_133 unplaced-scaffold na na JBNFPT010000132.1 = NW_027445724.1 Primary Assembly 10000 na scaffold_134 unplaced-scaffold na na JBNFPT010000133.1 = NW_027445725.1 Primary Assembly 5000 na scaffold_135 unplaced-scaffold na na JBNFPT010000134.1 = NW_027445726.1 Primary Assembly 8000 na scaffold_136 unplaced-scaffold na na JBNFPT010000135.1 = NW_027445727.1 Primary Assembly 2000 na scaffold_137 unplaced-scaffold na na JBNFPT010000136.1 = NW_027445728.1 Primary Assembly 8000 na scaffold_138 unplaced-scaffold na na JBNFPT010000137.1 = NW_027445729.1 Primary Assembly 10000 na scaffold_139 unplaced-scaffold na na JBNFPT010000138.1 = NW_027445730.1 Primary Assembly 5000 na scaffold_140 unplaced-scaffold na na JBNFPT010000139.1 = NW_027445732.1 Primary Assembly 10000 na scaffold_141 unplaced-scaffold na na JBNFPT010000140.1 = NW_027445733.1 Primary Assembly 10000 na scaffold_142 unplaced-scaffold na na JBNFPT010000141.1 = NW_027445734.1 Primary Assembly 2000 na scaffold_143 unplaced-scaffold na na JBNFPT010000142.1 = NW_027445735.1 Primary Assembly 10000 na scaffold_144 unplaced-scaffold na na JBNFPT010000143.1 = NW_027445736.1 Primary Assembly 10000 na scaffold_145 unplaced-scaffold na na JBNFPT010000144.1 = NW_027445737.1 Primary Assembly 2000 na scaffold_146 unplaced-scaffold na na JBNFPT010000145.1 = NW_027445738.1 Primary Assembly 4000 na scaffold_147 unplaced-scaffold na na JBNFPT010000146.1 = NW_027445739.1 Primary Assembly 25000 na scaffold_148 unplaced-scaffold na na JBNFPT010000147.1 = NW_027445740.1 Primary Assembly 5000 na scaffold_149 unplaced-scaffold na na JBNFPT010000148.1 = NW_027445741.1 Primary Assembly 5000 na scaffold_150 unplaced-scaffold na na JBNFPT010000149.1 = NW_027445743.1 Primary Assembly 25000 na scaffold_151 unplaced-scaffold na na JBNFPT010000150.1 = NW_027445744.1 Primary Assembly 25000 na scaffold_152 unplaced-scaffold na na JBNFPT010000151.1 = NW_027445745.1 Primary Assembly 5000 na scaffold_153 unplaced-scaffold na na JBNFPT010000152.1 = NW_027445746.1 Primary Assembly 3000 na scaffold_154 unplaced-scaffold na na JBNFPT010000153.1 = NW_027445747.1 Primary Assembly 10000 na scaffold_155 unplaced-scaffold na na JBNFPT010000154.1 = NW_027445748.1 Primary Assembly 1000 na scaffold_156 unplaced-scaffold na na JBNFPT010000155.1 = NW_027445749.1 Primary Assembly 1000 na scaffold_157 unplaced-scaffold na na JBNFPT010000156.1 = NW_027445750.1 Primary Assembly 25000 na scaffold_158 unplaced-scaffold na na JBNFPT010000157.1 = NW_027445751.1 Primary Assembly 25000 na scaffold_159 unplaced-scaffold na na JBNFPT010000158.1 = NW_027445752.1 Primary Assembly 5000 na scaffold_160 unplaced-scaffold na na JBNFPT010000159.1 = NW_027445754.1 Primary Assembly 121595 na scaffold_161 unplaced-scaffold na na JBNFPT010000160.1 = NW_027445755.1 Primary Assembly 10000 na scaffold_162 unplaced-scaffold na na JBNFPT010000161.1 = NW_027445756.1 Primary Assembly 5000 na scaffold_163 unplaced-scaffold na na JBNFPT010000162.1 = NW_027445757.1 Primary Assembly 5000 na scaffold_164 unplaced-scaffold na na JBNFPT010000163.1 = NW_027445758.1 Primary Assembly 5000 na scaffold_165 unplaced-scaffold na na JBNFPT010000164.1 = NW_027445759.1 Primary Assembly 2000 na scaffold_166 unplaced-scaffold na na JBNFPT010000165.1 = NW_027445760.1 Primary Assembly 5000 na scaffold_167 unplaced-scaffold na na JBNFPT010000166.1 = NW_027445761.1 Primary Assembly 5000 na scaffold_168 unplaced-scaffold na na JBNFPT010000167.1 = NW_027445762.1 Primary Assembly 5000 na scaffold_169 unplaced-scaffold na na JBNFPT010000168.1 = NW_027445763.1 Primary Assembly 5000 na scaffold_170 unplaced-scaffold na na JBNFPT010000169.1 = NW_027445765.1 Primary Assembly 10000 na scaffold_171 unplaced-scaffold na na JBNFPT010000170.1 = NW_027445766.1 Primary Assembly 10000 na scaffold_172 unplaced-scaffold na na JBNFPT010000171.1 = NW_027445767.1 Primary Assembly 10000 na scaffold_173 unplaced-scaffold na na JBNFPT010000172.1 = NW_027445768.1 Primary Assembly 5000 na scaffold_174 unplaced-scaffold na na JBNFPT010000173.1 = NW_027445769.1 Primary Assembly 25000 na scaffold_175 unplaced-scaffold na na JBNFPT010000174.1 = NW_027445770.1 Primary Assembly 2112546 na scaffold_176 unplaced-scaffold na na JBNFPT010000175.1 = NW_027445771.1 Primary Assembly 5000 na scaffold_177 unplaced-scaffold na na JBNFPT010000176.1 = NW_027445772.1 Primary Assembly 8000 na scaffold_178 unplaced-scaffold na na JBNFPT010000177.1 = NW_027445773.1 Primary Assembly 5000 na scaffold_179 unplaced-scaffold na na JBNFPT010000178.1 = NW_027445774.1 Primary Assembly 5000 na scaffold_180 unplaced-scaffold na na JBNFPT010000179.1 = NW_027445776.1 Primary Assembly 25000 na scaffold_181 unplaced-scaffold na na JBNFPT010000180.1 = NW_027445777.1 Primary Assembly 11000 na MT assembled-molecule MT Mitochondrion na <> NC_007102.1 non-nuclear 16078 na