The repeat files provided for this assembly were generated using RepeatMasker. Smit, AFA, Hubley, R & Green, P., RepeatMasker version 4.2.1 1996-2025 . VERSION: RepeatMasker version 4.2.1 Search Engine: NCBI/RMBLAST [ 2.14.1+ ] Using Master RepeatMasker Database: /hive/data/outside/RepeatMasker/RepeatMasker-4.2.1/Libraries/famdb Title : Dfam Version : 3.9 Date : 2025-03-10 Families : 4,122,019 Species/Taxa Search: Bombus vancouverensis nearcticus [NCBI Taxonomy ID: 2705178] Lineage: root;cellular organisms;Eukaryota;Opisthokonta;Metazoa; Eumetazoa;Bilateria;Protostomia;Ecdysozoa;Panarthropoda; Arthropoda;Mandibulata;Pancrustacea;Hexapoda;Insecta; Dicondylia;Pterygota ;Neoptera;Endopterygota; Hymenoptera;Apocrita;Aculeata ;Apoidea; Anthophila ;Apidae;Apinae;Bombini;Bombus Including curated and uncurated families: 16 families in ancestor taxa; 1115 lineage-specific families Building species libraries in: /hive/data/outside/RepeatMasker/RepeatMasker-4.2.1/Libraries/CONS-Dfam_3.9/bombus_vancouverensis_nearcticus_wunc RepeatMasker version 4.2.1 # RMRBMeta.embl library version: CC RELEASE 20181026; * # RepeatMasker engine: -uncurated -engine rmblast -pa 1 # RepeatMasker library options: -species 'Bombus vancouverensis nearcticus' PARAMETERS: /hive/data/outside/RepeatMasker/RepeatMasker-4.2.1/RepeatMasker -uncurated -engine rmblast -pa 1 -align -species 'Bombus vancouverensis nearcticus'