# Assembly name: ASM5401021v1 # Organism name: Methanocaldococcus sp. (euryarchaeotes) # Isolate: 128-2-R1-1-336_bin.80 # Taxid: 2152917 # BioSample: SAMN49583326 # BioProject: PRJNA1244896 # Submitter: Portland State University # Date: 2025-12-16 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBPMZR01 # Assembly method: MEGAHIT v. v1.2.9 # Expected final version: Yes # Genome coverage: 71.72x # Sequencing technology: Illumina NextSeq # Excluded from RefSeq: derived from metagenome # GenBank assembly accession: GCA_054010215.1 # RefSeq assembly accession: GCF_054010215.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_054010225.1 GCF_054010225.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name lcl_k127_868877 unplaced-scaffold na na JBPMZR010000001.1 = NZ_JBPMZR010000001.1 Primary Assembly 14328 na lcl_k127_1613803 unplaced-scaffold na na JBPMZR010000002.1 = NZ_JBPMZR010000002.1 Primary Assembly 2208 na lcl_k127_125969 unplaced-scaffold na na JBPMZR010000003.1 = NZ_JBPMZR010000003.1 Primary Assembly 4619 na lcl_k127_746105 unplaced-scaffold na na JBPMZR010000004.1 = NZ_JBPMZR010000004.1 Primary Assembly 2986 na lcl_k127_126173 unplaced-scaffold na na JBPMZR010000005.1 = NZ_JBPMZR010000005.1 Primary Assembly 5081 na lcl_k127_2080 unplaced-scaffold na na JBPMZR010000006.1 = NZ_JBPMZR010000006.1 Primary Assembly 14709 na lcl_k127_2124 unplaced-scaffold na na JBPMZR010000007.1 = NZ_JBPMZR010000007.1 Primary Assembly 2394 na lcl_k127_1119872 unplaced-scaffold na na JBPMZR010000008.1 = NZ_JBPMZR010000008.1 Primary Assembly 3567 na lcl_k127_1740420 unplaced-scaffold na na JBPMZR010000009.1 = NZ_JBPMZR010000009.1 Primary Assembly 4684 na lcl_k127_1368150 unplaced-scaffold na na JBPMZR010000010.1 = NZ_JBPMZR010000010.1 Primary Assembly 3990 na lcl_k127_5551 unplaced-scaffold na na JBPMZR010000011.1 = NZ_JBPMZR010000011.1 Primary Assembly 4917 na lcl_k127_749110 unplaced-scaffold na na JBPMZR010000012.1 = NZ_JBPMZR010000012.1 Primary Assembly 12673 na lcl_k127_377842 unplaced-scaffold na na JBPMZR010000013.1 = NZ_JBPMZR010000013.1 Primary Assembly 4189 na lcl_k127_1493868 unplaced-scaffold na na JBPMZR010000014.1 = NZ_JBPMZR010000014.1 Primary Assembly 27924 na lcl_k127_378908 unplaced-scaffold na na JBPMZR010000015.1 = NZ_JBPMZR010000015.1 Primary Assembly 20454 na lcl_k127_380131 unplaced-scaffold na na JBPMZR010000016.1 = NZ_JBPMZR010000016.1 Primary Assembly 7637 na lcl_k127_1372335 unplaced-scaffold na na JBPMZR010000017.1 = NZ_JBPMZR010000017.1 Primary Assembly 7551 na lcl_k127_1123867 unplaced-scaffold na na JBPMZR010000018.1 = NZ_JBPMZR010000018.1 Primary Assembly 12013 na lcl_k127_507487 unplaced-scaffold na na JBPMZR010000019.1 = NZ_JBPMZR010000019.1 Primary Assembly 26128 na lcl_k127_1003616 unplaced-scaffold na na JBPMZR010000020.1 = NZ_JBPMZR010000020.1 Primary Assembly 3009 na lcl_k127_632234 unplaced-scaffold na na JBPMZR010000021.1 = NZ_JBPMZR010000021.1 Primary Assembly 22240 na lcl_k127_755954 unplaced-scaffold na na JBPMZR010000022.1 = NZ_JBPMZR010000022.1 Primary Assembly 2928 na lcl_k127_1129013 unplaced-scaffold na na JBPMZR010000023.1 = NZ_JBPMZR010000023.1 Primary Assembly 2320 na lcl_k127_261766 unplaced-scaffold na na JBPMZR010000024.1 = NZ_JBPMZR010000024.1 Primary Assembly 39683 na lcl_k127_1129861 unplaced-scaffold na na JBPMZR010000025.1 = NZ_JBPMZR010000025.1 Primary Assembly 2069 na lcl_k127_262763 unplaced-scaffold na na JBPMZR010000026.1 = NZ_JBPMZR010000026.1 Primary Assembly 12399 na lcl_k127_1130968 unplaced-scaffold na na JBPMZR010000027.1 = NZ_JBPMZR010000027.1 Primary Assembly 2203 na lcl_k127_1007210 unplaced-scaffold na na JBPMZR010000028.1 = NZ_JBPMZR010000028.1 Primary Assembly 15532 na lcl_k127_1380177 unplaced-scaffold na na JBPMZR010000029.1 = NZ_JBPMZR010000029.1 Primary Assembly 12934 na lcl_k127_1007343 unplaced-scaffold na na JBPMZR010000030.1 = NZ_JBPMZR010000030.1 Primary Assembly 7909 na lcl_k127_17001 unplaced-scaffold na na JBPMZR010000031.1 = NZ_JBPMZR010000031.1 Primary Assembly 6951 na lcl_k127_1755435 unplaced-scaffold na na JBPMZR010000032.1 = NZ_JBPMZR010000032.1 Primary Assembly 28696 na lcl_k127_1629144 unplaced-scaffold na na JBPMZR010000033.1 = NZ_JBPMZR010000033.1 Primary Assembly 24236 na lcl_k127_1382170 unplaced-scaffold na na JBPMZR010000034.1 = NZ_JBPMZR010000034.1 Primary Assembly 25442 na lcl_k127_392187 unplaced-scaffold na na JBPMZR010000035.1 = NZ_JBPMZR010000035.1 Primary Assembly 3041 na lcl_k127_1010361 unplaced-scaffold na na JBPMZR010000036.1 = NZ_JBPMZR010000036.1 Primary Assembly 3996 na lcl_k127_145195 unplaced-scaffold na na JBPMZR010000037.1 = NZ_JBPMZR010000037.1 Primary Assembly 40135 na lcl_k127_1259477 unplaced-scaffold na na JBPMZR010000038.1 = NZ_JBPMZR010000038.1 Primary Assembly 10922 na lcl_k127_21074 unplaced-scaffold na na JBPMZR010000039.1 = NZ_JBPMZR010000039.1 Primary Assembly 14896 na lcl_k127_519539 unplaced-scaffold na na JBPMZR010000040.1 = NZ_JBPMZR010000040.1 Primary Assembly 4306 na lcl_k127_148202 unplaced-scaffold na na JBPMZR010000041.1 = NZ_JBPMZR010000041.1 Primary Assembly 8920 na lcl_k127_1014688 unplaced-scaffold na na JBPMZR010000042.1 = NZ_JBPMZR010000042.1 Primary Assembly 9396 na lcl_k127_1761517 unplaced-scaffold na na JBPMZR010000043.1 = NZ_JBPMZR010000043.1 Primary Assembly 4276 na lcl_k127_894017 unplaced-scaffold na na JBPMZR010000044.1 = NZ_JBPMZR010000044.1 Primary Assembly 7287 na lcl_k127_523126 unplaced-scaffold na na JBPMZR010000045.1 = NZ_JBPMZR010000045.1 Primary Assembly 4583 na lcl_k127_277493 unplaced-scaffold na na JBPMZR010000046.1 = NZ_JBPMZR010000046.1 Primary Assembly 7182 na lcl_k127_1638983 unplaced-scaffold na na JBPMZR010000047.1 = NZ_JBPMZR010000047.1 Primary Assembly 10786 na lcl_k127_1514983 unplaced-scaffold na na JBPMZR010000048.1 = NZ_JBPMZR010000048.1 Primary Assembly 8957 na lcl_k127_277999 unplaced-scaffold na na JBPMZR010000049.1 = NZ_JBPMZR010000049.1 Primary Assembly 7744 na lcl_k127_1269413 unplaced-scaffold na na JBPMZR010000050.1 = NZ_JBPMZR010000050.1 Primary Assembly 14326 na lcl_k127_406581 unplaced-scaffold na na JBPMZR010000051.1 = NZ_JBPMZR010000051.1 Primary Assembly 2374 na lcl_k127_1770781 unplaced-scaffold na na JBPMZR010000052.1 = NZ_JBPMZR010000052.1 Primary Assembly 7579 na lcl_k127_652292 unplaced-scaffold na na JBPMZR010000053.1 = NZ_JBPMZR010000053.1 Primary Assembly 12442 na lcl_k127_903803 unplaced-scaffold na na JBPMZR010000054.1 = NZ_JBPMZR010000054.1 Primary Assembly 21206 na lcl_k127_1148783 unplaced-scaffold na na JBPMZR010000055.1 = NZ_JBPMZR010000055.1 Primary Assembly 9245 na lcl_k127_409967 unplaced-scaffold na na JBPMZR010000056.1 = NZ_JBPMZR010000056.1 Primary Assembly 2003 na lcl_k127_654321 unplaced-scaffold na na JBPMZR010000057.1 = NZ_JBPMZR010000057.1 Primary Assembly 28038 na lcl_k127_162268 unplaced-scaffold na na JBPMZR010000058.1 = NZ_JBPMZR010000058.1 Primary Assembly 4560 na lcl_k127_1150740 unplaced-scaffold na na JBPMZR010000059.1 = NZ_JBPMZR010000059.1 Primary Assembly 3994 na lcl_k127_287494 unplaced-scaffold na na JBPMZR010000060.1 = NZ_JBPMZR010000060.1 Primary Assembly 8734 na lcl_k127_287513 unplaced-scaffold na na JBPMZR010000061.1 = NZ_JBPMZR010000061.1 Primary Assembly 15912 na lcl_k127_909219 unplaced-scaffold na na JBPMZR010000062.1 = NZ_JBPMZR010000062.1 Primary Assembly 8147 na lcl_k127_165198 unplaced-scaffold na na JBPMZR010000063.1 = NZ_JBPMZR010000063.1 Primary Assembly 2299 na lcl_k127_657994 unplaced-scaffold na na JBPMZR010000064.1 = NZ_JBPMZR010000064.1 Primary Assembly 8702 na lcl_k127_910069 unplaced-scaffold na na JBPMZR010000065.1 = NZ_JBPMZR010000065.1 Primary Assembly 4270 na lcl_k127_414653 unplaced-scaffold na na JBPMZR010000066.1 = NZ_JBPMZR010000066.1 Primary Assembly 5342 na lcl_k127_1778107 unplaced-scaffold na na JBPMZR010000067.1 = NZ_JBPMZR010000067.1 Primary Assembly 13014 na lcl_k127_542309 unplaced-scaffold na na JBPMZR010000068.1 = NZ_JBPMZR010000068.1 Primary Assembly 4337 na lcl_k127_1655529 unplaced-scaffold na na JBPMZR010000069.1 = NZ_JBPMZR010000069.1 Primary Assembly 34692 na lcl_k127_664407 unplaced-scaffold na na JBPMZR010000070.1 = NZ_JBPMZR010000070.1 Primary Assembly 31150 na lcl_k127_1784857 unplaced-scaffold na na JBPMZR010000071.1 = NZ_JBPMZR010000071.1 Primary Assembly 7190 na lcl_k127_1161751 unplaced-scaffold na na JBPMZR010000072.1 = NZ_JBPMZR010000072.1 Primary Assembly 18495 na lcl_k127_1532309 unplaced-scaffold na na JBPMZR010000073.1 = NZ_JBPMZR010000073.1 Primary Assembly 33471 na lcl_k127_1410992 unplaced-scaffold na na JBPMZR010000074.1 = NZ_JBPMZR010000074.1 Primary Assembly 20228 na lcl_k127_919970 unplaced-scaffold na na JBPMZR010000075.1 = NZ_JBPMZR010000075.1 Primary Assembly 2560 na lcl_k127_1659612 unplaced-scaffold na na JBPMZR010000076.1 = NZ_JBPMZR010000076.1 Primary Assembly 7813 na lcl_k127_790787 unplaced-scaffold na na JBPMZR010000077.1 = NZ_JBPMZR010000077.1 Primary Assembly 21567 na lcl_k127_301055 unplaced-scaffold na na JBPMZR010000078.1 = NZ_JBPMZR010000078.1 Primary Assembly 11420 na lcl_k127_1661342 unplaced-scaffold na na JBPMZR010000079.1 = NZ_JBPMZR010000079.1 Primary Assembly 3683 na lcl_k127_1662352 unplaced-scaffold na na JBPMZR010000080.1 = NZ_JBPMZR010000080.1 Primary Assembly 12320 na lcl_k127_1663656 unplaced-scaffold na na JBPMZR010000081.1 = NZ_JBPMZR010000081.1 Primary Assembly 4805 na lcl_k127_1168593 unplaced-scaffold na na JBPMZR010000082.1 = NZ_JBPMZR010000082.1 Primary Assembly 14911 na lcl_k127_555323 unplaced-scaffold na na JBPMZR010000083.1 = NZ_JBPMZR010000083.1 Primary Assembly 2334 na lcl_k127_308121 unplaced-scaffold na na JBPMZR010000084.1 = NZ_JBPMZR010000084.1 Primary Assembly 6721 na lcl_k127_1797764 unplaced-scaffold na na JBPMZR010000085.1 = NZ_JBPMZR010000085.1 Primary Assembly 5285 na lcl_k127_61577 unplaced-scaffold na na JBPMZR010000086.1 = NZ_JBPMZR010000086.1 Primary Assembly 6876 na lcl_k127_61831 unplaced-scaffold na na JBPMZR010000087.1 = NZ_JBPMZR010000087.1 Primary Assembly 2885 na lcl_k127_1421751 unplaced-scaffold na na JBPMZR010000088.1 = NZ_JBPMZR010000088.1 Primary Assembly 7659 na lcl_k127_310531 unplaced-scaffold na na JBPMZR010000089.1 = NZ_JBPMZR010000089.1 Primary Assembly 7045 na lcl_k127_933354 unplaced-scaffold na na JBPMZR010000090.1 = NZ_JBPMZR010000090.1 Primary Assembly 17511 na lcl_k127_65165 unplaced-scaffold na na JBPMZR010000091.1 = NZ_JBPMZR010000091.1 Primary Assembly 2618 na lcl_k127_1051948 unplaced-scaffold na na JBPMZR010000092.1 = NZ_JBPMZR010000092.1 Primary Assembly 4170 na lcl_k127_191296 unplaced-scaffold na na JBPMZR010000093.1 = NZ_JBPMZR010000093.1 Primary Assembly 7152 na lcl_k127_684335 unplaced-scaffold na na JBPMZR010000094.1 = NZ_JBPMZR010000094.1 Primary Assembly 18992 na lcl_k127_938692 unplaced-scaffold na na JBPMZR010000095.1 = NZ_JBPMZR010000095.1 Primary Assembly 2334 na lcl_k127_1551408 unplaced-scaffold na na JBPMZR010000096.1 = NZ_JBPMZR010000096.1 Primary Assembly 4758 na lcl_k127_685207 unplaced-scaffold na na JBPMZR010000097.1 = NZ_JBPMZR010000097.1 Primary Assembly 2062 na lcl_k127_1808499 unplaced-scaffold na na JBPMZR010000098.1 = NZ_JBPMZR010000098.1 Primary Assembly 20729 na lcl_k127_1058985 unplaced-scaffold na na JBPMZR010000099.1 = NZ_JBPMZR010000099.1 Primary Assembly 10507 na lcl_k127_688153 unplaced-scaffold na na JBPMZR010000100.1 = NZ_JBPMZR010000100.1 Primary Assembly 15613 na lcl_k127_322583 unplaced-scaffold na na JBPMZR010000101.1 = NZ_JBPMZR010000101.1 Primary Assembly 4118 na lcl_k127_325220 unplaced-scaffold na na JBPMZR010000102.1 = NZ_JBPMZR010000102.1 Primary Assembly 2750 na lcl_k127_946920 unplaced-scaffold na na JBPMZR010000103.1 = NZ_JBPMZR010000103.1 Primary Assembly 2358 na lcl_k127_691560 unplaced-scaffold na na JBPMZR010000104.1 = NZ_JBPMZR010000104.1 Primary Assembly 3820 na lcl_k127_326805 unplaced-scaffold na na JBPMZR010000105.1 = NZ_JBPMZR010000105.1 Primary Assembly 12716 na lcl_k127_205058 unplaced-scaffold na na JBPMZR010000106.1 = NZ_JBPMZR010000106.1 Primary Assembly 3017 na lcl_k127_693291 unplaced-scaffold na na JBPMZR010000107.1 = NZ_JBPMZR010000107.1 Primary Assembly 21883 na lcl_k127_81228 unplaced-scaffold na na JBPMZR010000108.1 = NZ_JBPMZR010000108.1 Primary Assembly 8183 na lcl_k127_206995 unplaced-scaffold na na JBPMZR010000109.1 = NZ_JBPMZR010000109.1 Primary Assembly 12601 na lcl_k127_951608 unplaced-scaffold na na JBPMZR010000110.1 = NZ_JBPMZR010000110.1 Primary Assembly 3309 na lcl_k127_1564538 unplaced-scaffold na na JBPMZR010000111.1 = NZ_JBPMZR010000111.1 Primary Assembly 3483 na lcl_k127_1564649 unplaced-scaffold na na JBPMZR010000112.1 = NZ_JBPMZR010000112.1 Primary Assembly 2467 na lcl_k127_333074 unplaced-scaffold na na JBPMZR010000113.1 = NZ_JBPMZR010000113.1 Primary Assembly 5089 na lcl_k127_585846 unplaced-scaffold na na JBPMZR010000114.1 = NZ_JBPMZR010000114.1 Primary Assembly 4580 na lcl_k127_213955 unplaced-scaffold na na JBPMZR010000115.1 = NZ_JBPMZR010000115.1 Primary Assembly 31207 na lcl_k127_1694955 unplaced-scaffold na na JBPMZR010000116.1 = NZ_JBPMZR010000116.1 Primary Assembly 13562 na lcl_k127_215858 unplaced-scaffold na na JBPMZR010000117.1 = NZ_JBPMZR010000117.1 Primary Assembly 27270 na lcl_k127_216106 unplaced-scaffold na na JBPMZR010000118.1 = NZ_JBPMZR010000118.1 Primary Assembly 3530 na lcl_k127_704283 unplaced-scaffold na na JBPMZR010000119.1 = NZ_JBPMZR010000119.1 Primary Assembly 4433 na lcl_k127_468872 unplaced-scaffold na na JBPMZR010000120.1 = NZ_JBPMZR010000120.1 Primary Assembly 7572 na lcl_k127_705840 unplaced-scaffold na na JBPMZR010000121.1 = NZ_JBPMZR010000121.1 Primary Assembly 12274 na lcl_k127_831225 unplaced-scaffold na na JBPMZR010000122.1 = NZ_JBPMZR010000122.1 Primary Assembly 40668 na lcl_k127_966513 unplaced-scaffold na na JBPMZR010000123.1 = NZ_JBPMZR010000123.1 Primary Assembly 6266 na lcl_k127_709464 unplaced-scaffold na na JBPMZR010000124.1 = NZ_JBPMZR010000124.1 Primary Assembly 3557 na lcl_k127_1332237 unplaced-scaffold na na JBPMZR010000125.1 = NZ_JBPMZR010000125.1 Primary Assembly 2295 na lcl_k127_1705433 unplaced-scaffold na na JBPMZR010000126.1 = NZ_JBPMZR010000126.1 Primary Assembly 4996 na lcl_k127_103830 unplaced-scaffold na na JBPMZR010000127.1 = NZ_JBPMZR010000127.1 Primary Assembly 2021 na lcl_k127_972715 unplaced-scaffold na na JBPMZR010000128.1 = NZ_JBPMZR010000128.1 Primary Assembly 2659 na lcl_k127_715856 unplaced-scaffold na na JBPMZR010000129.1 = NZ_JBPMZR010000129.1 Primary Assembly 3695 na lcl_k127_1844564 unplaced-scaffold na na JBPMZR010000130.1 = NZ_JBPMZR010000130.1 Primary Assembly 3249 na lcl_k127_977015 unplaced-scaffold na na JBPMZR010000131.1 = NZ_JBPMZR010000131.1 Primary Assembly 4783 na lcl_k127_978522 unplaced-scaffold na na JBPMZR010000132.1 = NZ_JBPMZR010000132.1 Primary Assembly 6232 na lcl_k127_1588837 unplaced-scaffold na na JBPMZR010000133.1 = NZ_JBPMZR010000133.1 Primary Assembly 6865 na lcl_k127_1342928 unplaced-scaffold na na JBPMZR010000134.1 = NZ_JBPMZR010000134.1 Primary Assembly 4250 na lcl_k127_491252 unplaced-scaffold na na JBPMZR010000135.1 = NZ_JBPMZR010000135.1 Primary Assembly 7337 na lcl_k127_619329 unplaced-scaffold na na JBPMZR010000136.1 = NZ_JBPMZR010000136.1 Primary Assembly 2097 na