# Assembly name: ASM5404606v1 # Organism name: Thermococcus sp. (euryarchaeotes) # Isolate: 3753-1-204_bin.69 # Taxid: 35749 # BioSample: SAMN49582129 # BioProject: PRJNA1244896 # Submitter: Portland State University # Date: 2025-12-16 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBPLIF01 # Assembly method: MEGAHIT v. v1.2.9 # Expected final version: Yes # Genome coverage: 10.9x # Sequencing technology: Illumina NextSeq # Excluded from RefSeq: derived from metagenome # GenBank assembly accession: GCA_054046065.1 # RefSeq assembly accession: GCF_054046065.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_054046075.1 GCF_054046075.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name lcl_k127_480881 unplaced-scaffold na na JBPLIF010000001.1 = NZ_JBPLIF010000001.1 Primary Assembly 14225 na lcl_k127_694313 unplaced-scaffold na na JBPLIF010000002.1 = NZ_JBPLIF010000002.1 Primary Assembly 14043 na lcl_k127_187688 unplaced-scaffold na na JBPLIF010000003.1 = NZ_JBPLIF010000003.1 Primary Assembly 11300 na lcl_k127_481327 unplaced-scaffold na na JBPLIF010000004.1 = NZ_JBPLIF010000004.1 Primary Assembly 23322 na lcl_k127_54097 unplaced-scaffold na na JBPLIF010000005.1 = NZ_JBPLIF010000005.1 Primary Assembly 55447 na lcl_k127_241208 unplaced-scaffold na na JBPLIF010000006.1 = NZ_JBPLIF010000006.1 Primary Assembly 9483 na lcl_k127_27742 unplaced-scaffold na na JBPLIF010000007.1 = NZ_JBPLIF010000007.1 Primary Assembly 5262 na lcl_k127_428890 unplaced-scaffold na na JBPLIF010000008.1 = NZ_JBPLIF010000008.1 Primary Assembly 30489 na lcl_k127_482112 unplaced-scaffold na na JBPLIF010000009.1 = NZ_JBPLIF010000009.1 Primary Assembly 9660 na lcl_k127_1269 unplaced-scaffold na na JBPLIF010000010.1 = NZ_JBPLIF010000010.1 Primary Assembly 9287 na lcl_k127_108614 unplaced-scaffold na na JBPLIF010000011.1 = NZ_JBPLIF010000011.1 Primary Assembly 2058 na lcl_k127_323424 unplaced-scaffold na na JBPLIF010000012.1 = NZ_JBPLIF010000012.1 Primary Assembly 12544 na lcl_k127_2034 unplaced-scaffold na na JBPLIF010000013.1 = NZ_JBPLIF010000013.1 Primary Assembly 12063 na lcl_k127_323616 unplaced-scaffold na na JBPLIF010000014.1 = NZ_JBPLIF010000014.1 Primary Assembly 20181 na lcl_k127_509949 unplaced-scaffold na na JBPLIF010000015.1 = NZ_JBPLIF010000015.1 Primary Assembly 8840 na lcl_k127_270693 unplaced-scaffold na na JBPLIF010000016.1 = NZ_JBPLIF010000016.1 Primary Assembly 34509 na lcl_k127_3589 unplaced-scaffold na na JBPLIF010000017.1 = NZ_JBPLIF010000017.1 Primary Assembly 6419 na lcl_k127_111069 unplaced-scaffold na na JBPLIF010000018.1 = NZ_JBPLIF010000018.1 Primary Assembly 12929 na lcl_k127_245246 unplaced-scaffold na na JBPLIF010000019.1 = NZ_JBPLIF010000019.1 Primary Assembly 4177 na lcl_k127_138010 unplaced-scaffold na na JBPLIF010000020.1 = NZ_JBPLIF010000020.1 Primary Assembly 13494 na lcl_k127_458985 unplaced-scaffold na na JBPLIF010000021.1 = NZ_JBPLIF010000021.1 Primary Assembly 15380 na lcl_k127_111437 unplaced-scaffold na na JBPLIF010000022.1 = NZ_JBPLIF010000022.1 Primary Assembly 18255 na lcl_k127_4459 unplaced-scaffold na na JBPLIF010000023.1 = NZ_JBPLIF010000023.1 Primary Assembly 44892 na lcl_k127_486329 unplaced-scaffold na na JBPLIF010000024.1 = NZ_JBPLIF010000024.1 Primary Assembly 3792 na lcl_k127_671590 unplaced-scaffold na na JBPLIF010000025.1 = NZ_JBPLIF010000025.1 Primary Assembly 24878 na lcl_k127_486495 unplaced-scaffold na na JBPLIF010000026.1 = NZ_JBPLIF010000026.1 Primary Assembly 17746 na lcl_k127_566255 unplaced-scaffold na na JBPLIF010000027.1 = NZ_JBPLIF010000027.1 Primary Assembly 14708 na lcl_k127_166188 unplaced-scaffold na na JBPLIF010000028.1 = NZ_JBPLIF010000028.1 Primary Assembly 13700 na lcl_k127_435052 unplaced-scaffold na na JBPLIF010000029.1 = NZ_JBPLIF010000029.1 Primary Assembly 16105 na lcl_k127_780661 unplaced-scaffold na na JBPLIF010000030.1 = NZ_JBPLIF010000030.1 Primary Assembly 9894 na lcl_k127_514852 unplaced-scaffold na na JBPLIF010000031.1 = NZ_JBPLIF010000031.1 Primary Assembly 9897 na lcl_k127_728375 unplaced-scaffold na na JBPLIF010000032.1 = NZ_JBPLIF010000032.1 Primary Assembly 7425 na lcl_k127_541070 unplaced-scaffold na na JBPLIF010000033.1 = NZ_JBPLIF010000033.1 Primary Assembly 17243 na lcl_k127_355092 unplaced-scaffold na na JBPLIF010000034.1 = NZ_JBPLIF010000034.1 Primary Assembly 13308 na lcl_k127_408188 unplaced-scaffold na na JBPLIF010000035.1 = NZ_JBPLIF010000035.1 Primary Assembly 30193 na lcl_k127_34454 unplaced-scaffold na na JBPLIF010000036.1 = NZ_JBPLIF010000036.1 Primary Assembly 25138 na lcl_k127_701160 unplaced-scaffold na na JBPLIF010000037.1 = NZ_JBPLIF010000037.1 Primary Assembly 5179 na lcl_k127_274800 unplaced-scaffold na na JBPLIF010000038.1 = NZ_JBPLIF010000038.1 Primary Assembly 79326 na lcl_k127_408673 unplaced-scaffold na na JBPLIF010000039.1 = NZ_JBPLIF010000039.1 Primary Assembly 4656 na lcl_k127_408755 unplaced-scaffold na na JBPLIF010000040.1 = NZ_JBPLIF010000040.1 Primary Assembly 43070 na lcl_k127_782583 unplaced-scaffold na na JBPLIF010000041.1 = NZ_JBPLIF010000041.1 Primary Assembly 13498 na lcl_k127_7713 unplaced-scaffold na na JBPLIF010000042.1 = NZ_JBPLIF010000042.1 Primary Assembly 5332 na lcl_k127_595528 unplaced-scaffold na na JBPLIF010000043.1 = NZ_JBPLIF010000043.1 Primary Assembly 17761 na lcl_k127_35535 unplaced-scaffold na na JBPLIF010000044.1 = NZ_JBPLIF010000044.1 Primary Assembly 19542 na lcl_k127_542796 unplaced-scaffold na na JBPLIF010000045.1 = NZ_JBPLIF010000045.1 Primary Assembly 4635 na lcl_k127_383824 unplaced-scaffold na na JBPLIF010000046.1 = NZ_JBPLIF010000046.1 Primary Assembly 40863 na lcl_k127_357077 unplaced-scaffold na na JBPLIF010000047.1 = NZ_JBPLIF010000047.1 Primary Assembly 2095 na lcl_k127_357209 unplaced-scaffold na na JBPLIF010000048.1 = NZ_JBPLIF010000048.1 Primary Assembly 14675 na lcl_k127_276387 unplaced-scaffold na na JBPLIF010000049.1 = NZ_JBPLIF010000049.1 Primary Assembly 3911 na lcl_k127_570296 unplaced-scaffold na na JBPLIF010000050.1 = NZ_JBPLIF010000050.1 Primary Assembly 13073 na lcl_k127_116514 unplaced-scaffold na na JBPLIF010000051.1 = NZ_JBPLIF010000051.1 Primary Assembly 8556 na lcl_k127_543705 unplaced-scaffold na na JBPLIF010000052.1 = NZ_JBPLIF010000052.1 Primary Assembly 18926 na lcl_k127_384808 unplaced-scaffold na na JBPLIF010000053.1 = NZ_JBPLIF010000053.1 Primary Assembly 6226 na lcl_k127_731815 unplaced-scaffold na na JBPLIF010000054.1 = NZ_JBPLIF010000054.1 Primary Assembly 17597 na lcl_k127_571470 unplaced-scaffold na na JBPLIF010000055.1 = NZ_JBPLIF010000055.1 Primary Assembly 6072 na lcl_k127_117989 unplaced-scaffold na na JBPLIF010000056.1 = NZ_JBPLIF010000056.1 Primary Assembly 7590 na lcl_k127_332950 unplaced-scaffold na na JBPLIF010000057.1 = NZ_JBPLIF010000057.1 Primary Assembly 21019 na lcl_k127_519398 unplaced-scaffold na na JBPLIF010000058.1 = NZ_JBPLIF010000058.1 Primary Assembly 2054 na lcl_k127_172478 unplaced-scaffold na na JBPLIF010000059.1 = NZ_JBPLIF010000059.1 Primary Assembly 15450 na lcl_k127_624173 unplaced-scaffold na na JBPLIF010000060.1 = NZ_JBPLIF010000060.1 Primary Assembly 26246 na lcl_k127_119119 unplaced-scaffold na na JBPLIF010000061.1 = NZ_JBPLIF010000061.1 Primary Assembly 2738 na lcl_k127_494142 unplaced-scaffold na na JBPLIF010000062.1 = NZ_JBPLIF010000062.1 Primary Assembly 21340 na lcl_k127_227767 unplaced-scaffold na na JBPLIF010000063.1 = NZ_JBPLIF010000063.1 Primary Assembly 42432 na lcl_k127_307849 unplaced-scaffold na na JBPLIF010000064.1 = NZ_JBPLIF010000064.1 Primary Assembly 16195 na lcl_k127_334360 unplaced-scaffold na na JBPLIF010000065.1 = NZ_JBPLIF010000065.1 Primary Assembly 8827 na lcl_k127_442178 unplaced-scaffold na na JBPLIF010000066.1 = NZ_JBPLIF010000066.1 Primary Assembly 9193 na lcl_k127_442389 unplaced-scaffold na na JBPLIF010000067.1 = NZ_JBPLIF010000067.1 Primary Assembly 3497 na lcl_k127_788119 unplaced-scaffold na na JBPLIF010000068.1 = NZ_JBPLIF010000068.1 Primary Assembly 53819 na lcl_k127_389290 unplaced-scaffold na na JBPLIF010000069.1 = NZ_JBPLIF010000069.1 Primary Assembly 44440 na lcl_k127_255639 unplaced-scaffold na na JBPLIF010000070.1 = NZ_JBPLIF010000070.1 Primary Assembly 5161 na lcl_k127_626302 unplaced-scaffold na na JBPLIF010000071.1 = NZ_JBPLIF010000071.1 Primary Assembly 30590 na lcl_k127_548886 unplaced-scaffold na na JBPLIF010000072.1 = NZ_JBPLIF010000072.1 Primary Assembly 5091 na lcl_k127_707875 unplaced-scaffold na na JBPLIF010000073.1 = NZ_JBPLIF010000073.1 Primary Assembly 16598 na lcl_k127_42550 unplaced-scaffold na na JBPLIF010000074.1 = NZ_JBPLIF010000074.1 Primary Assembly 13936 na lcl_k127_576494 unplaced-scaffold na na JBPLIF010000075.1 = NZ_JBPLIF010000075.1 Primary Assembly 15780 na lcl_k127_202317 unplaced-scaffold na na JBPLIF010000076.1 = NZ_JBPLIF010000076.1 Primary Assembly 33976 na lcl_k127_789966 unplaced-scaffold na na JBPLIF010000077.1 = NZ_JBPLIF010000077.1 Primary Assembly 21749 na lcl_k127_470305 unplaced-scaffold na na JBPLIF010000078.1 = NZ_JBPLIF010000078.1 Primary Assembly 14345 na lcl_k127_523659 unplaced-scaffold na na JBPLIF010000079.1 = NZ_JBPLIF010000079.1 Primary Assembly 11656 na lcl_k127_283056 unplaced-scaffold na na JBPLIF010000080.1 = NZ_JBPLIF010000080.1 Primary Assembly 3512 na lcl_k127_43499 unplaced-scaffold na na JBPLIF010000081.1 = NZ_JBPLIF010000081.1 Primary Assembly 15816 na lcl_k127_470951 unplaced-scaffold na na JBPLIF010000082.1 = NZ_JBPLIF010000082.1 Primary Assembly 7744 na lcl_k127_656273 unplaced-scaffold na na JBPLIF010000083.1 = NZ_JBPLIF010000083.1 Primary Assembly 8990 na lcl_k127_338111 unplaced-scaffold na na JBPLIF010000084.1 = NZ_JBPLIF010000084.1 Primary Assembly 16673 na lcl_k127_122762 unplaced-scaffold na na JBPLIF010000085.1 = NZ_JBPLIF010000085.1 Primary Assembly 14156 na lcl_k127_682440 unplaced-scaffold na na JBPLIF010000086.1 = NZ_JBPLIF010000086.1 Primary Assembly 6473 na lcl_k127_628612 unplaced-scaffold na na JBPLIF010000087.1 = NZ_JBPLIF010000087.1 Primary Assembly 2249 na lcl_k127_204026 unplaced-scaffold na na JBPLIF010000088.1 = NZ_JBPLIF010000088.1 Primary Assembly 29771 na lcl_k127_96699 unplaced-scaffold na na JBPLIF010000089.1 = NZ_JBPLIF010000089.1 Primary Assembly 49039 na lcl_k127_283920 unplaced-scaffold na na JBPLIF010000090.1 = NZ_JBPLIF010000090.1 Primary Assembly 5100 na lcl_k127_123363 unplaced-scaffold na na JBPLIF010000091.1 = NZ_JBPLIF010000091.1 Primary Assembly 24278 na lcl_k127_710469 unplaced-scaffold na na JBPLIF010000092.1 = NZ_JBPLIF010000092.1 Primary Assembly 21932 na lcl_k127_499735 unplaced-scaffold na na JBPLIF010000093.1 = NZ_JBPLIF010000093.1 Primary Assembly 6600 na lcl_k127_259523 unplaced-scaffold na na JBPLIF010000094.1 = NZ_JBPLIF010000094.1 Primary Assembly 18174 na lcl_k127_313922 unplaced-scaffold na na JBPLIF010000095.1 = NZ_JBPLIF010000095.1 Primary Assembly 20249 na lcl_k127_314125 unplaced-scaffold na na JBPLIF010000096.1 = NZ_JBPLIF010000096.1 Primary Assembly 3454 na lcl_k127_98306 unplaced-scaffold na na JBPLIF010000097.1 = NZ_JBPLIF010000097.1 Primary Assembly 15825 na lcl_k127_233788 unplaced-scaffold na na JBPLIF010000098.1 = NZ_JBPLIF010000098.1 Primary Assembly 5525 na lcl_k127_233912 unplaced-scaffold na na JBPLIF010000099.1 = NZ_JBPLIF010000099.1 Primary Assembly 24587 na lcl_k127_152600 unplaced-scaffold na na JBPLIF010000100.1 = NZ_JBPLIF010000100.1 Primary Assembly 9092 na lcl_k127_314765 unplaced-scaffold na na JBPLIF010000101.1 = NZ_JBPLIF010000101.1 Primary Assembly 10351 na lcl_k127_153038 unplaced-scaffold na na JBPLIF010000102.1 = NZ_JBPLIF010000102.1 Primary Assembly 6407 na lcl_k127_315497 unplaced-scaffold na na JBPLIF010000103.1 = NZ_JBPLIF010000103.1 Primary Assembly 20618 na lcl_k127_261466 unplaced-scaffold na na JBPLIF010000104.1 = NZ_JBPLIF010000104.1 Primary Assembly 2688 na lcl_k127_742496 unplaced-scaffold na na JBPLIF010000105.1 = NZ_JBPLIF010000105.1 Primary Assembly 12777 na lcl_k127_286980 unplaced-scaffold na na JBPLIF010000106.1 = NZ_JBPLIF010000106.1 Primary Assembly 21498 na lcl_k127_475629 unplaced-scaffold na na JBPLIF010000107.1 = NZ_JBPLIF010000107.1 Primary Assembly 3974 na lcl_k127_608403 unplaced-scaffold na na JBPLIF010000108.1 = NZ_JBPLIF010000108.1 Primary Assembly 5861 na lcl_k127_449790 unplaced-scaffold na na JBPLIF010000109.1 = NZ_JBPLIF010000109.1 Primary Assembly 7532 na lcl_k127_449830 unplaced-scaffold na na JBPLIF010000110.1 = NZ_JBPLIF010000110.1 Primary Assembly 3133 na lcl_k127_182645 unplaced-scaffold na na JBPLIF010000111.1 = NZ_JBPLIF010000111.1 Primary Assembly 5969 na lcl_k127_423130 unplaced-scaffold na na JBPLIF010000112.1 = NZ_JBPLIF010000112.1 Primary Assembly 39017 na lcl_k127_263537 unplaced-scaffold na na JBPLIF010000113.1 = NZ_JBPLIF010000113.1 Primary Assembly 4041 na lcl_k127_183647 unplaced-scaffold na na JBPLIF010000114.1 = NZ_JBPLIF010000114.1 Primary Assembly 11634 na lcl_k127_370736 unplaced-scaffold na na JBPLIF010000115.1 = NZ_JBPLIF010000115.1 Primary Assembly 31902 na lcl_k127_156233 unplaced-scaffold na na JBPLIF010000116.1 = NZ_JBPLIF010000116.1 Primary Assembly 21783 na lcl_k127_128901 unplaced-scaffold na na JBPLIF010000117.1 = NZ_JBPLIF010000117.1 Primary Assembly 28712 na lcl_k127_128988 unplaced-scaffold na na JBPLIF010000118.1 = NZ_JBPLIF010000118.1 Primary Assembly 11571 na lcl_k127_210211 unplaced-scaffold na na JBPLIF010000119.1 = NZ_JBPLIF010000119.1 Primary Assembly 18764 na lcl_k127_772334 unplaced-scaffold na na JBPLIF010000120.1 = NZ_JBPLIF010000120.1 Primary Assembly 9589 na lcl_k127_425251 unplaced-scaffold na na JBPLIF010000121.1 = NZ_JBPLIF010000121.1 Primary Assembly 6934 na lcl_k127_211737 unplaced-scaffold na na JBPLIF010000122.1 = NZ_JBPLIF010000122.1 Primary Assembly 16446 na lcl_k127_425317 unplaced-scaffold na na JBPLIF010000123.1 = NZ_JBPLIF010000123.1 Primary Assembly 33300 na lcl_k127_52466 unplaced-scaffold na na JBPLIF010000124.1 = NZ_JBPLIF010000124.1 Primary Assembly 4099 na lcl_k127_586355 unplaced-scaffold na na JBPLIF010000125.1 = NZ_JBPLIF010000125.1 Primary Assembly 11502 na lcl_k127_130788 unplaced-scaffold na na JBPLIF010000126.1 = NZ_JBPLIF010000126.1 Primary Assembly 16151 na lcl_k127_77886 unplaced-scaffold na na JBPLIF010000127.1 = NZ_JBPLIF010000127.1 Primary Assembly 19537 na lcl_k127_719788 unplaced-scaffold na na JBPLIF010000128.1 = NZ_JBPLIF010000128.1 Primary Assembly 47974 na