# Assembly name: ASM5780239v1 # Organism name: Ceratotherium simum simum (southern white rhinoceros) # Isolate: JZ-2026a # Sex: male # Taxid: 73337 # BioSample: SAMN55046337 # BioProject: PRJNA1418492 # Submitter: Northwestern Polytechnical University # Date: 2026-06-01 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBVTIQ01 # Assembly method: NextDenovo v. 2.2 # Expected final version: Yes # Genome coverage: 60.0x # Sequencing technology: Oxford Nanopore # RefSeq category: Reference Genome # GenBank assembly accession: GCA_057802395.1 # RefSeq assembly accession: GCF_057802395.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Unit names: ## Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HiC_scaffold_1 assembled-molecule 1 Chromosome CM173619.1 = NC_141900.1 Primary Assembly 111060176 na HiC_scaffold_2 assembled-molecule 2 Chromosome CM173620.1 = NC_141901.1 Primary Assembly 100135867 na HiC_scaffold_3 assembled-molecule 3 Chromosome CM173621.1 = NC_141902.1 Primary Assembly 97945024 na HiC_scaffold_4 assembled-molecule 4 Chromosome CM173622.1 = NC_141903.1 Primary Assembly 94734997 na HiC_scaffold_5 assembled-molecule 5 Chromosome CM173623.1 = NC_141904.1 Primary Assembly 93792370 na HiC_scaffold_6 assembled-molecule 6 Chromosome CM173624.1 = NC_141905.1 Primary Assembly 91245533 na HiC_scaffold_7 assembled-molecule 7 Chromosome CM173625.1 = NC_141906.1 Primary Assembly 86399262 na HiC_scaffold_8 assembled-molecule 8 Chromosome CM173626.1 = NC_141907.1 Primary Assembly 85715130 na HiC_scaffold_9 assembled-molecule 9 Chromosome CM173627.1 = NC_141908.1 Primary Assembly 84114433 na HiC_scaffold_10 assembled-molecule 10 Chromosome CM173628.1 = NC_141909.1 Primary Assembly 83660988 na HiC_scaffold_11 assembled-molecule 11 Chromosome CM173629.1 = NC_141910.1 Primary Assembly 76472979 na HiC_scaffold_12 assembled-molecule 12 Chromosome CM173630.1 = NC_141911.1 Primary Assembly 74349200 na HiC_scaffold_13 assembled-molecule 13 Chromosome CM173631.1 = NC_141912.1 Primary Assembly 66379976 na HiC_scaffold_14 assembled-molecule 14 Chromosome CM173632.1 = NC_141913.1 Primary Assembly 64951247 na HiC_scaffold_15 assembled-molecule 15 Chromosome CM173633.1 = NC_141914.1 Primary Assembly 63777951 na HiC_scaffold_16 assembled-molecule 16 Chromosome CM173634.1 = NC_141915.1 Primary Assembly 63008044 na HiC_scaffold_17 assembled-molecule 17 Chromosome CM173635.1 = NC_141916.1 Primary Assembly 61852356 na HiC_scaffold_18 assembled-molecule 18 Chromosome CM173636.1 = NC_141917.1 Primary Assembly 59487954 na HiC_scaffold_19 assembled-molecule 19 Chromosome CM173637.1 = NC_141918.1 Primary Assembly 57464428 na HiC_scaffold_20 assembled-molecule 20 Chromosome CM173638.1 = NC_141919.1 Primary Assembly 56730535 na HiC_scaffold_21 assembled-molecule 21 Chromosome CM173639.1 = NC_141920.1 Primary Assembly 51053398 na HiC_scaffold_22 assembled-molecule 22 Chromosome CM173640.1 = NC_141921.1 Primary Assembly 51038278 na HiC_scaffold_23 assembled-molecule 23 Chromosome CM173641.1 = NC_141922.1 Primary Assembly 50413867 na HiC_scaffold_24 assembled-molecule 24 Chromosome CM173642.1 = NC_141923.1 Primary Assembly 49407044 na HiC_scaffold_25 assembled-molecule 25 Chromosome CM173643.1 = NC_141924.1 Primary Assembly 47732833 na HiC_scaffold_26 assembled-molecule 26 Chromosome CM173644.1 = NC_141925.1 Primary Assembly 44410805 na HiC_scaffold_27 assembled-molecule 27 Chromosome CM173645.1 = NC_141926.1 Primary Assembly 42870308 na HiC_scaffold_28 assembled-molecule 28 Chromosome CM173646.1 = NC_141927.1 Primary Assembly 41627160 na HiC_scaffold_29 assembled-molecule 29 Chromosome CM173647.1 = NC_141928.1 Primary Assembly 41191993 na HiC_scaffold_30 assembled-molecule 30 Chromosome CM173648.1 = NC_141929.1 Primary Assembly 38411313 na HiC_scaffold_31 assembled-molecule 31 Chromosome CM173649.1 = NC_141930.1 Primary Assembly 35915531 na HiC_scaffold_32 assembled-molecule 32 Chromosome CM173650.1 = NC_141931.1 Primary Assembly 34082526 na HiC_scaffold_33 assembled-molecule 33 Chromosome CM173651.1 = NC_141932.1 Primary Assembly 33516542 na HiC_scaffold_34 assembled-molecule 34 Chromosome CM173652.1 = NC_141933.1 Primary Assembly 32967768 na HiC_scaffold_35 assembled-molecule 35 Chromosome CM173653.1 = NC_141934.1 Primary Assembly 32432872 na HiC_scaffold_36 assembled-molecule 36 Chromosome CM173654.1 = NC_141935.1 Primary Assembly 31435229 na HiC_scaffold_37 assembled-molecule 37 Chromosome CM173655.1 = NC_141936.1 Primary Assembly 29467504 na HiC_scaffold_38 assembled-molecule 38 Chromosome CM173656.1 = NC_141937.1 Primary Assembly 26787814 na HiC_scaffold_39 assembled-molecule 39 Chromosome CM173657.1 = NC_141938.1 Primary Assembly 16621400 na HiC_scaffold_40 assembled-molecule 40 Chromosome CM173658.1 = NC_141939.1 Primary Assembly 16353933 na HiC_scaffold_41 assembled-molecule X Chromosome CM173659.1 = NC_141940.1 Primary Assembly 129733000 na HiC_scaffold_42 assembled-molecule Y Chromosome CM173660.1 = NC_141941.1 Primary Assembly 13349618 na HiC_scaffold_43 unplaced-scaffold na na JBVTIQ010000043.1 = NW_028261259.1 Primary Assembly 9900615 na HiC_scaffold_44 unplaced-scaffold na na JBVTIQ010000044.1 = NW_028261260.1 Primary Assembly 2501804 na HiC_scaffold_45 unplaced-scaffold na na JBVTIQ010000045.1 = NW_028261261.1 Primary Assembly 798498 na HiC_scaffold_46 unplaced-scaffold na na JBVTIQ010000046.1 = NW_028261262.1 Primary Assembly 495400 na HiC_scaffold_47 unplaced-scaffold na na JBVTIQ010000047.1 = NW_028261263.1 Primary Assembly 435036 na HiC_scaffold_48 unplaced-scaffold na na JBVTIQ010000048.1 = NW_028261264.1 Primary Assembly 356050 na HiC_scaffold_49 unplaced-scaffold na na JBVTIQ010000049.1 = NW_028261265.1 Primary Assembly 269936 na HiC_scaffold_50 unplaced-scaffold na na JBVTIQ010000050.1 = NW_028261266.1 Primary Assembly 244403 na HiC_scaffold_51 unplaced-scaffold na na JBVTIQ010000051.1 = NW_028261267.1 Primary Assembly 207944 na HiC_scaffold_52 unplaced-scaffold na na JBVTIQ010000052.1 = NW_028261268.1 Primary Assembly 189345 na HiC_scaffold_53 unplaced-scaffold na na JBVTIQ010000053.1 = NW_028261269.1 Primary Assembly 185263 na HiC_scaffold_54 unplaced-scaffold na na JBVTIQ010000054.1 = NW_028261270.1 Primary Assembly 164908 na HiC_scaffold_55 unplaced-scaffold na na JBVTIQ010000055.1 = NW_028261271.1 Primary Assembly 155200 na HiC_scaffold_56 unplaced-scaffold na na JBVTIQ010000056.1 = NW_028261272.1 Primary Assembly 125000 na HiC_scaffold_57 unplaced-scaffold na na JBVTIQ010000057.1 = NW_028261273.1 Primary Assembly 125000 na HiC_scaffold_58 unplaced-scaffold na na JBVTIQ010000058.1 = NW_028261274.1 Primary Assembly 125000 na HiC_scaffold_59 unplaced-scaffold na na JBVTIQ010000059.1 = NW_028261275.1 Primary Assembly 125000 na HiC_scaffold_60 unplaced-scaffold na na JBVTIQ010000060.1 = NW_028261276.1 Primary Assembly 125000 na HiC_scaffold_61 unplaced-scaffold na na JBVTIQ010000061.1 = NW_028261277.1 Primary Assembly 122158 na HiC_scaffold_62 unplaced-scaffold na na JBVTIQ010000062.1 = NW_028261278.1 Primary Assembly 50000 na HiC_scaffold_63 unplaced-scaffold na na JBVTIQ010000063.1 = NW_028261279.1 Primary Assembly 50000 na HiC_scaffold_64 unplaced-scaffold na na JBVTIQ010000064.1 = NW_028261280.1 Primary Assembly 50000 na HiC_scaffold_65 unplaced-scaffold na na JBVTIQ010000065.1 = NW_028261281.1 Primary Assembly 50000 na HiC_scaffold_66 unplaced-scaffold na na JBVTIQ010000066.1 = NW_028261282.1 Primary Assembly 25000 na HiC_scaffold_67 unplaced-scaffold na na JBVTIQ010000067.1 = NW_028261283.1 Primary Assembly 25000 na HiC_scaffold_68 unplaced-scaffold na na JBVTIQ010000068.1 = NW_028261284.1 Primary Assembly 25000 na HiC_scaffold_69 unplaced-scaffold na na JBVTIQ010000069.1 = NW_028261285.1 Primary Assembly 25000 na HiC_scaffold_70 unplaced-scaffold na na JBVTIQ010000070.1 = NW_028261286.1 Primary Assembly 25000 na HiC_scaffold_71 unplaced-scaffold na na JBVTIQ010000071.1 = NW_028261287.1 Primary Assembly 18461 na HiC_scaffold_72 unplaced-scaffold na na JBVTIQ010000072.1 = NW_028261288.1 Primary Assembly 15969 na HiC_scaffold_73 unplaced-scaffold na na JBVTIQ010000073.1 = NW_028261289.1 Primary Assembly 15000 na HiC_scaffold_74 unplaced-scaffold na na JBVTIQ010000074.1 = NW_028261290.1 Primary Assembly 10000 na