# Assembly name:  RSI-T2T
# Organism name:  Rhinolophus sinicus (Chinese rufous horseshoe bat)
# Isolate:  RSI-liver-muscle
# Sex:  female
# Taxid:          89399
# BioSample:      SAMN60522983
# BioProject:     PRJNA1472873
# Submitter:      Kunming Institute of Zoology, Chinese Academy of Sciences
# Date:           2026-06-03
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JBYRDP01
# Assembly method: Eukaryotic Genome Annotation Pipeline - External (EGAPx) v. 0.4.0
# Expected final version: Yes
# Genome coverage: 60.0x
# Sequencing technology: Oxford Nanopore PromethION; PacBio
# RefSeq category: Reference Genome
# GenBank assembly accession: GCA_057876585.1
# RefSeq assembly accession: GCF_057876585.1
# RefSeq assembly and GenBank assemblies identical: no
#
## Assembly-Unit names:
## Primary Assembly
## non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
HiC_scaffold_1	assembled-molecule	1	Chromosome	CM174542.1	=	NC_142501.1	Primary Assembly	215389465	na
HiC_scaffold_2	assembled-molecule	2	Chromosome	CM174543.1	=	NC_142502.1	Primary Assembly	190825683	na
HiC_scaffold_3	assembled-molecule	3	Chromosome	CM174544.1	=	NC_142503.1	Primary Assembly	202607799	na
HiC_scaffold_4	assembled-molecule	4	Chromosome	CM174545.1	=	NC_142504.1	Primary Assembly	118540120	na
HiC_scaffold_5	assembled-molecule	5	Chromosome	CM174546.1	=	NC_142505.1	Primary Assembly	111987235	na
HiC_scaffold_6	assembled-molecule	6	Chromosome	CM174547.1	=	NC_142506.1	Primary Assembly	69802840	na
HiC_scaffold_7	assembled-molecule	7	Chromosome	CM174548.1	=	NC_142507.1	Primary Assembly	56654424	na
HiC_scaffold_8	assembled-molecule	8	Chromosome	CM174549.1	=	NC_142508.1	Primary Assembly	82521649	na
HiC_scaffold_9	assembled-molecule	9	Chromosome	CM174550.1	=	NC_142509.1	Primary Assembly	40741561	na
HiC_scaffold_10	assembled-molecule	10	Chromosome	CM174551.1	=	NC_142510.1	Primary Assembly	20263651	na
HiC_scaffold_11	assembled-molecule	11	Chromosome	CM174552.1	=	NC_142511.1	Primary Assembly	27674177	na
HiC_scaffold_12	assembled-molecule	12	Chromosome	CM174553.1	=	NC_142512.1	Primary Assembly	57970848	na
HiC_scaffold_13	assembled-molecule	13	Chromosome	CM174554.1	=	NC_142513.1	Primary Assembly	63550073	na
HiC_scaffold_14	assembled-molecule	14	Chromosome	CM174555.1	=	NC_142514.1	Primary Assembly	188912077	na
HiC_scaffold_15	assembled-molecule	15	Chromosome	CM174556.1	=	NC_142515.1	Primary Assembly	134307461	na
HiC_scaffold_16	assembled-molecule	16	Chromosome	CM174557.1	=	NC_142516.1	Primary Assembly	193075841	na
HiC_scaffold_17	assembled-molecule	17	Chromosome	CM174558.1	=	NC_142517.1	Primary Assembly	213614197	na
HiC_scaffold_18	assembled-molecule	18	Chromosome	CM174559.1	=	NC_142518.1	Primary Assembly	118015551	na
HiC_scaffold_19	unplaced-scaffold	na	na	JBYRDP010000019.1	=	NW_028290710.1	Primary Assembly	1970734	na
HiC_scaffold_20	unplaced-scaffold	na	na	JBYRDP010000020.1	=	NW_028290711.1	Primary Assembly	91062	na
HiC_scaffold_22	unplaced-scaffold	na	na	JBYRDP010000022.1	=	NW_028290712.1	Primary Assembly	5941847	na
HiC_scaffold_23	unplaced-scaffold	na	na	JBYRDP010000023.1	=	NW_028290713.1	Primary Assembly	2770254	na
HiC_scaffold_21	assembled-molecule	MT	Mitochondrion	CM174560.1	<>	na	non-nuclear	16914	na