# Assembly name: BBA-D_PRJEB14160_v1 # Organism name: Thiomonas delicata (b-proteobacteria) # Infraspecific name: strain=DSM 16361 # Taxid: 364030 # BioSample: SAMEA4025135 # BioProject: PRJEB14160 # Submitter: Genoscope CEA # Date: 2017-07-28 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: FLMQ01 # Assembly method: velvet MP # Genome coverage: 176x # Sequencing technology: 1run MiSeq Mate-pair Nextera 2X150 # Relation to type material: assembly from heterotypic synonym type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900088825.1 # RefSeq assembly accession: GCF_900088825.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900088824.1 GCF_900088824.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BBA-D_THIARS_scaffold1 unplaced-scaffold na na LT592167.1 = NZ_LT592167.1 Primary Assembly 2740 na BBA-D_THIARS_scaffold2 unplaced-scaffold na na LT592168.1 = NZ_LT592168.1 Primary Assembly 2522 na BBA-D_THIARS_scaffold3 unplaced-scaffold na na LT592169.1 = NZ_LT592169.1 Primary Assembly 2563 na BBA-D_THIARS_scaffold4 unplaced-scaffold na na LT592170.1 = NZ_LT592170.1 Primary Assembly 2021470 na BBA-D_THIARS_scaffold5 unplaced-scaffold na na LT592171.1 = NZ_LT592171.1 Primary Assembly 1771634 na BBA-D_THIARS_scaffold6 unplaced-scaffold na na LT592172.1 = NZ_LT592172.1 Primary Assembly 2203 na BBA-D_THIARS_scaffold7 unplaced-scaffold na na LT592173.1 = NZ_LT592173.1 Primary Assembly 3025 na BBA-D_THIARS_scaffold8 unplaced-scaffold na na LT592174.1 = NZ_LT592174.1 Primary Assembly 5405 na BBA-D_THIARS_scaffold9 unplaced-scaffold na na LT592175.1 = NZ_LT592175.1 Primary Assembly 2956 na BBA-D_THIARS_scaffold10 unplaced-scaffold na na LT592176.1 = NZ_LT592176.1 Primary Assembly 1002 na BBA-D_THIARS_scaffold11 unplaced-scaffold na na LT592177.1 = NZ_LT592177.1 Primary Assembly 1624 na BBA-D_THIARS_scaffold12 unplaced-scaffold na na LT592178.1 = NZ_LT592178.1 Primary Assembly 214 na BBA-D_THIARS_scaffold13 unplaced-scaffold na na LT592179.1 = NZ_LT592179.1 Primary Assembly 707 na BBA-D_THIARS_scaffold14 unplaced-scaffold na na LT592180.1 = NZ_LT592180.1 Primary Assembly 376 na BBA-D_THIARS_scaffold15 unplaced-scaffold na na LT592181.1 = NZ_LT592181.1 Primary Assembly 573 na BBA-D_THIARS_scaffold16 unplaced-scaffold na na LT592182.1 = NZ_LT592182.1 Primary Assembly 270 na BBA-D_THIARS_scaffold17 unplaced-scaffold na na LT592183.1 = NZ_LT592183.1 Primary Assembly 363 na BBA-D_THIARS_scaffold18 unplaced-scaffold na na LT592184.1 = NZ_LT592184.1 Primary Assembly 1201 na BBA-D_THIARS_scaffold19 unplaced-scaffold na na LT592185.1 = NZ_LT592185.1 Primary Assembly 218 na BBA-D_THIARS_scaffold20 unplaced-scaffold na na LT592186.1 = NZ_LT592186.1 Primary Assembly 377 na BBA-D_THIARS_scaffold21 unplaced-scaffold na na LT592187.1 = NZ_LT592187.1 Primary Assembly 203 na BBA-D_THIARS_scaffold22 unplaced-scaffold na na LT592188.1 = NZ_LT592188.1 Primary Assembly 377 na BBA-D_THIARS_scaffold23 unplaced-scaffold na na LT592189.1 = NZ_LT592189.1 Primary Assembly 216 na BBA-D_THIARS_scaffold24 unplaced-scaffold na na LT592190.1 = NZ_LT592190.1 Primary Assembly 1230 na BBA-D_THIARS_scaffold25 unplaced-scaffold na na LT592191.1 = NZ_LT592191.1 Primary Assembly 263 na BBA-D_THIARS_scaffold26 unplaced-scaffold na na LT592192.1 = NZ_LT592192.1 Primary Assembly 425 na BBA-D_THIARS_scaffold27 unplaced-scaffold na na LT592193.1 = NZ_LT592193.1 Primary Assembly 245 na BBA-D_THIARS_scaffold28 unplaced-scaffold na na LT592194.1 = NZ_LT592194.1 Primary Assembly 217 na BBA-D_THIARS_scaffold29 unplaced-scaffold na na LT592195.1 = NZ_LT592195.1 Primary Assembly 232 na BBA-D_THIARS_scaffold30 unplaced-scaffold na na LT592196.1 = NZ_LT592196.1 Primary Assembly 461 na BBA-D_THIARS_scaffold31 unplaced-scaffold na na LT592197.1 = NZ_LT592197.1 Primary Assembly 1097 na BBA-D_THIARS_scaffold32 unplaced-scaffold na na LT592198.1 = NZ_LT592198.1 Primary Assembly 606 na BBA-D_THIARS_scaffold33 unplaced-scaffold na na LT592199.1 = NZ_LT592199.1 Primary Assembly 1532 na BBA-D_THIARS_scaffold34 unplaced-scaffold na na LT592200.1 = NZ_LT592200.1 Primary Assembly 488 na BBA-D_THIARS_scaffold35 unplaced-scaffold na na LT592201.1 = NZ_LT592201.1 Primary Assembly 1109 na BBA-D_THIARS_scaffold36 unplaced-scaffold na na LT592202.1 = NZ_LT592202.1 Primary Assembly 376 na BBA-D_THIARS_scaffold37 unplaced-scaffold na na LT592203.1 = NZ_LT592203.1 Primary Assembly 407 na BBA-D_THIARS_scaffold38 unplaced-scaffold na na LT592204.1 = NZ_LT592204.1 Primary Assembly 306 na BBA-D_THIARS_scaffold39 unplaced-scaffold na na LT592205.1 = NZ_LT592205.1 Primary Assembly 349 na BBA-D_THIARS_scaffold40 unplaced-scaffold na na LT592206.1 = NZ_LT592206.1 Primary Assembly 213 na BBA-D_THIARS_scaffold41 unplaced-scaffold na na LT592207.1 = NZ_LT592207.1 Primary Assembly 365 na BBA-D_THIARS_scaffold42 unplaced-scaffold na na LT592208.1 = NZ_LT592208.1 Primary Assembly 441 na BBA-D_THIARS_scaffold43 unplaced-scaffold na na LT592209.1 = NZ_LT592209.1 Primary Assembly 695 na BBA-D_THIARS_scaffold44 unplaced-scaffold na na LT592210.1 = NZ_LT592210.1 Primary Assembly 401 na BBA-D_THIARS_scaffold45 unplaced-scaffold na na LT592211.1 = NZ_LT592211.1 Primary Assembly 232 na BBA-D_THIARS_scaffold46 unplaced-scaffold na na LT592212.1 = NZ_LT592212.1 Primary Assembly 464 na BBA-D_THIARS_scaffold47 unplaced-scaffold na na LT592213.1 = NZ_LT592213.1 Primary Assembly 344 na BBA-D_THIARS_scaffold48 unplaced-scaffold na na LT592214.1 = NZ_LT592214.1 Primary Assembly 374 na BBA-D_THIARS_scaffold49 unplaced-scaffold na na LT592215.1 = NZ_LT592215.1 Primary Assembly 721 na BBA-D_THIARS_scaffold50 unplaced-scaffold na na LT592216.1 = NZ_LT592216.1 Primary Assembly 1668 na BBA-D_THIARS_scaffold51 unplaced-scaffold na na LT592217.1 = NZ_LT592217.1 Primary Assembly 319 na BBA-D_THIARS_scaffold52 unplaced-scaffold na na LT592218.1 = NZ_LT592218.1 Primary Assembly 1459 na BBA-D_THIARS_scaffold53 unplaced-scaffold na na LT592219.1 = NZ_LT592219.1 Primary Assembly 548 na BBA-D_THIARS_scaffold54 unplaced-scaffold na na LT592220.1 = NZ_LT592220.1 Primary Assembly 1315 na