# Assembly name: IMG-taxon 2599185223 annotated assembly # Organism name: Alkaliphilus peptidifermentans DSM 18978 (firmicutes) # Infraspecific name: strain=DSM 18978 # Taxid: 1120976 # BioSample: SAMN03080606 # BioProject: PRJEB15752 # Submitter: DOE - JOINT GENOME INSTITUTE # Date: 2016-10-17 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: FMUS01 # Assembly method: ALLPATHS v. r46652 # Genome coverage: 275x # Sequencing technology: Illumina HiSeq 2500,Illumina HiSeq 2500-1TB # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900101495.1 # RefSeq assembly accession: GCF_900101495.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900101494.1 GCF_900101494.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name FMUS01000001.1 unplaced-scaffold na na FMUS01000001.1 = NZ_FMUS01000001.1 Primary Assembly 343395 na FMUS01000002.1 unplaced-scaffold na na FMUS01000002.1 = NZ_FMUS01000002.1 Primary Assembly 251488 na FMUS01000003.1 unplaced-scaffold na na FMUS01000003.1 = NZ_FMUS01000003.1 Primary Assembly 220087 na FMUS01000004.1 unplaced-scaffold na na FMUS01000004.1 = NZ_FMUS01000004.1 Primary Assembly 201299 na FMUS01000005.1 unplaced-scaffold na na FMUS01000005.1 = NZ_FMUS01000005.1 Primary Assembly 198157 na FMUS01000006.1 unplaced-scaffold na na FMUS01000006.1 = NZ_FMUS01000006.1 Primary Assembly 171425 na FMUS01000007.1 unplaced-scaffold na na FMUS01000007.1 = NZ_FMUS01000007.1 Primary Assembly 153518 na FMUS01000008.1 unplaced-scaffold na na FMUS01000008.1 = NZ_FMUS01000008.1 Primary Assembly 141215 na FMUS01000009.1 unplaced-scaffold na na FMUS01000009.1 = NZ_FMUS01000009.1 Primary Assembly 138512 na FMUS01000010.1 unplaced-scaffold na na FMUS01000010.1 = NZ_FMUS01000010.1 Primary Assembly 136102 na FMUS01000011.1 unplaced-scaffold na na FMUS01000011.1 = NZ_FMUS01000011.1 Primary Assembly 133170 na FMUS01000012.1 unplaced-scaffold na na FMUS01000012.1 = NZ_FMUS01000012.1 Primary Assembly 125792 na FMUS01000013.1 unplaced-scaffold na na FMUS01000013.1 = NZ_FMUS01000013.1 Primary Assembly 112931 na FMUS01000014.1 unplaced-scaffold na na FMUS01000014.1 = NZ_FMUS01000014.1 Primary Assembly 111394 na FMUS01000015.1 unplaced-scaffold na na FMUS01000015.1 = NZ_FMUS01000015.1 Primary Assembly 107325 na FMUS01000016.1 unplaced-scaffold na na FMUS01000016.1 = NZ_FMUS01000016.1 Primary Assembly 106596 na FMUS01000017.1 unplaced-scaffold na na FMUS01000017.1 = NZ_FMUS01000017.1 Primary Assembly 101816 na FMUS01000018.1 unplaced-scaffold na na FMUS01000018.1 = NZ_FMUS01000018.1 Primary Assembly 100999 na FMUS01000019.1 unplaced-scaffold na na FMUS01000019.1 = NZ_FMUS01000019.1 Primary Assembly 95017 na FMUS01000020.1 unplaced-scaffold na na FMUS01000020.1 = NZ_FMUS01000020.1 Primary Assembly 92241 na FMUS01000021.1 unplaced-scaffold na na FMUS01000021.1 = NZ_FMUS01000021.1 Primary Assembly 91175 na FMUS01000022.1 unplaced-scaffold na na FMUS01000022.1 = NZ_FMUS01000022.1 Primary Assembly 87533 na FMUS01000023.1 unplaced-scaffold na na FMUS01000023.1 = NZ_FMUS01000023.1 Primary Assembly 86602 na FMUS01000024.1 unplaced-scaffold na na FMUS01000024.1 = NZ_FMUS01000024.1 Primary Assembly 78611 na FMUS01000025.1 unplaced-scaffold na na FMUS01000025.1 = NZ_FMUS01000025.1 Primary Assembly 77303 na FMUS01000026.1 unplaced-scaffold na na FMUS01000026.1 = NZ_FMUS01000026.1 Primary Assembly 77302 na FMUS01000027.1 unplaced-scaffold na na FMUS01000027.1 = NZ_FMUS01000027.1 Primary Assembly 71914 na FMUS01000028.1 unplaced-scaffold na na FMUS01000028.1 = NZ_FMUS01000028.1 Primary Assembly 69584 na FMUS01000029.1 unplaced-scaffold na na FMUS01000029.1 = NZ_FMUS01000029.1 Primary Assembly 67555 na FMUS01000030.1 unplaced-scaffold na na FMUS01000030.1 = NZ_FMUS01000030.1 Primary Assembly 57805 na FMUS01000031.1 unplaced-scaffold na na FMUS01000031.1 = NZ_FMUS01000031.1 Primary Assembly 52365 na FMUS01000032.1 unplaced-scaffold na na FMUS01000032.1 = NZ_FMUS01000032.1 Primary Assembly 52351 na FMUS01000033.1 unplaced-scaffold na na FMUS01000033.1 = NZ_FMUS01000033.1 Primary Assembly 52321 na FMUS01000034.1 unplaced-scaffold na na FMUS01000034.1 = NZ_FMUS01000034.1 Primary Assembly 51269 na FMUS01000035.1 unplaced-scaffold na na FMUS01000035.1 = NZ_FMUS01000035.1 Primary Assembly 40163 na FMUS01000036.1 unplaced-scaffold na na FMUS01000036.1 = NZ_FMUS01000036.1 Primary Assembly 38595 na FMUS01000037.1 unplaced-scaffold na na FMUS01000037.1 = NZ_FMUS01000037.1 Primary Assembly 35294 na FMUS01000038.1 unplaced-scaffold na na FMUS01000038.1 = NZ_FMUS01000038.1 Primary Assembly 28765 na FMUS01000039.1 unplaced-scaffold na na FMUS01000039.1 = NZ_FMUS01000039.1 Primary Assembly 25728 na FMUS01000040.1 unplaced-scaffold na na FMUS01000040.1 = NZ_FMUS01000040.1 Primary Assembly 23455 na FMUS01000041.1 unplaced-scaffold na na FMUS01000041.1 = NZ_FMUS01000041.1 Primary Assembly 22410 na FMUS01000042.1 unplaced-scaffold na na FMUS01000042.1 = NZ_FMUS01000042.1 Primary Assembly 21740 na FMUS01000043.1 unplaced-scaffold na na FMUS01000043.1 = NZ_FMUS01000043.1 Primary Assembly 17839 na FMUS01000044.1 unplaced-scaffold na na FMUS01000044.1 = NZ_FMUS01000044.1 Primary Assembly 16739 na FMUS01000045.1 unplaced-scaffold na na FMUS01000045.1 = NZ_FMUS01000045.1 Primary Assembly 16042 na FMUS01000046.1 unplaced-scaffold na na FMUS01000046.1 = NZ_FMUS01000046.1 Primary Assembly 13405 na FMUS01000047.1 unplaced-scaffold na na FMUS01000047.1 = NZ_FMUS01000047.1 Primary Assembly 13324 na FMUS01000048.1 unplaced-scaffold na na FMUS01000048.1 = NZ_FMUS01000048.1 Primary Assembly 12080 na FMUS01000049.1 unplaced-scaffold na na FMUS01000049.1 = NZ_FMUS01000049.1 Primary Assembly 11548 na FMUS01000050.1 unplaced-scaffold na na FMUS01000050.1 = NZ_FMUS01000050.1 Primary Assembly 11036 na FMUS01000051.1 unplaced-scaffold na na FMUS01000051.1 = NZ_FMUS01000051.1 Primary Assembly 10011 na FMUS01000052.1 unplaced-scaffold na na FMUS01000052.1 = NZ_FMUS01000052.1 Primary Assembly 8314 na FMUS01000053.1 unplaced-scaffold na na FMUS01000053.1 = NZ_FMUS01000053.1 Primary Assembly 8286 na FMUS01000054.1 unplaced-scaffold na na FMUS01000054.1 = NZ_FMUS01000054.1 Primary Assembly 8273 na FMUS01000055.1 unplaced-scaffold na na FMUS01000055.1 = NZ_FMUS01000055.1 Primary Assembly 8189 na FMUS01000056.1 unplaced-scaffold na na FMUS01000056.1 = NZ_FMUS01000056.1 Primary Assembly 6534 na FMUS01000057.1 unplaced-scaffold na na FMUS01000057.1 = NZ_FMUS01000057.1 Primary Assembly 6085 na FMUS01000058.1 unplaced-scaffold na na FMUS01000058.1 = NZ_FMUS01000058.1 Primary Assembly 5496 na FMUS01000059.1 unplaced-scaffold na na FMUS01000059.1 = NZ_FMUS01000059.1 Primary Assembly 5213 na FMUS01000060.1 unplaced-scaffold na na FMUS01000060.1 = NZ_FMUS01000060.1 Primary Assembly 3911 na FMUS01000061.1 unplaced-scaffold na na FMUS01000061.1 = NZ_FMUS01000061.1 Primary Assembly 3159 na FMUS01000062.1 unplaced-scaffold na na FMUS01000062.1 = NZ_FMUS01000062.1 Primary Assembly 2818 na FMUS01000063.1 unplaced-scaffold na na FMUS01000063.1 = NZ_FMUS01000063.1 Primary Assembly 2251 na FMUS01000064.1 unplaced-scaffold na na FMUS01000064.1 = NZ_FMUS01000064.1 Primary Assembly 2277 na FMUS01000065.1 unplaced-scaffold na na FMUS01000065.1 = NZ_FMUS01000065.1 Primary Assembly 2118 na FMUS01000066.1 unplaced-scaffold na na FMUS01000066.1 = NZ_FMUS01000066.1 Primary Assembly 2004 na FMUS01000067.1 unplaced-scaffold na na FMUS01000067.1 = NZ_FMUS01000067.1 Primary Assembly 1725 na FMUS01000068.1 unplaced-scaffold na na FMUS01000068.1 = NZ_FMUS01000068.1 Primary Assembly 1676 na FMUS01000069.1 unplaced-scaffold na na FMUS01000069.1 = NZ_FMUS01000069.1 Primary Assembly 1581 na FMUS01000070.1 unplaced-scaffold na na FMUS01000070.1 = NZ_FMUS01000070.1 Primary Assembly 1430 na FMUS01000071.1 unplaced-scaffold na na FMUS01000071.1 = NZ_FMUS01000071.1 Primary Assembly 1395 na FMUS01000072.1 unplaced-scaffold na na FMUS01000072.1 = NZ_FMUS01000072.1 Primary Assembly 1385 na FMUS01000073.1 unplaced-scaffold na na FMUS01000073.1 = NZ_FMUS01000073.1 Primary Assembly 1325 na