# Assembly name: IMG-taxon 2619618824 annotated assembly # Organism name: Trichococcus ilyis (firmicutes) # Infraspecific name: strain=DSM 22150 # Taxid: 640938 # BioSample: SAMN05216375 # BioProject: PRJEB16785 # Submitter: DOE - JOINT GENOME INSTITUTE # Date: 2016-10-31 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: FNYT01 # Assembly method: ALLPATHS v. r46652 # Genome coverage: 391x # Sequencing technology: Illumina HiSeq 2500,Illumina HiSeq 2500-1TB # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900109135.1 # RefSeq assembly accession: GCF_900109135.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900109134.1 GCF_900109134.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name FNYT01000001.1 unplaced-scaffold na na FNYT01000001.1 = NZ_FNYT01000001.1 Primary Assembly 307325 na FNYT01000002.1 unplaced-scaffold na na FNYT01000002.1 = NZ_FNYT01000002.1 Primary Assembly 165150 na FNYT01000003.1 unplaced-scaffold na na FNYT01000003.1 = NZ_FNYT01000003.1 Primary Assembly 160606 na FNYT01000004.1 unplaced-scaffold na na FNYT01000004.1 = NZ_FNYT01000004.1 Primary Assembly 158414 na FNYT01000005.1 unplaced-scaffold na na FNYT01000005.1 = NZ_FNYT01000005.1 Primary Assembly 135282 na FNYT01000006.1 unplaced-scaffold na na FNYT01000006.1 = NZ_FNYT01000006.1 Primary Assembly 121660 na FNYT01000007.1 unplaced-scaffold na na FNYT01000007.1 = NZ_FNYT01000007.1 Primary Assembly 116878 na FNYT01000008.1 unplaced-scaffold na na FNYT01000008.1 = NZ_FNYT01000008.1 Primary Assembly 103704 na FNYT01000009.1 unplaced-scaffold na na FNYT01000009.1 = NZ_FNYT01000009.1 Primary Assembly 103239 na FNYT01000010.1 unplaced-scaffold na na FNYT01000010.1 = NZ_FNYT01000010.1 Primary Assembly 95797 na FNYT01000011.1 unplaced-scaffold na na FNYT01000011.1 = NZ_FNYT01000011.1 Primary Assembly 91534 na FNYT01000012.1 unplaced-scaffold na na FNYT01000012.1 = NZ_FNYT01000012.1 Primary Assembly 89354 na FNYT01000013.1 unplaced-scaffold na na FNYT01000013.1 = NZ_FNYT01000013.1 Primary Assembly 87250 na FNYT01000014.1 unplaced-scaffold na na FNYT01000014.1 = NZ_FNYT01000014.1 Primary Assembly 74268 na FNYT01000015.1 unplaced-scaffold na na FNYT01000015.1 = NZ_FNYT01000015.1 Primary Assembly 72724 na FNYT01000016.1 unplaced-scaffold na na FNYT01000016.1 = NZ_FNYT01000016.1 Primary Assembly 68097 na FNYT01000017.1 unplaced-scaffold na na FNYT01000017.1 = NZ_FNYT01000017.1 Primary Assembly 67525 na FNYT01000018.1 unplaced-scaffold na na FNYT01000018.1 = NZ_FNYT01000018.1 Primary Assembly 61071 na FNYT01000019.1 unplaced-scaffold na na FNYT01000019.1 = NZ_FNYT01000019.1 Primary Assembly 58956 na FNYT01000020.1 unplaced-scaffold na na FNYT01000020.1 = NZ_FNYT01000020.1 Primary Assembly 56190 na FNYT01000021.1 unplaced-scaffold na na FNYT01000021.1 = NZ_FNYT01000021.1 Primary Assembly 55853 na FNYT01000022.1 unplaced-scaffold na na FNYT01000022.1 = NZ_FNYT01000022.1 Primary Assembly 52292 na FNYT01000023.1 unplaced-scaffold na na FNYT01000023.1 = NZ_FNYT01000023.1 Primary Assembly 46864 na FNYT01000024.1 unplaced-scaffold na na FNYT01000024.1 = NZ_FNYT01000024.1 Primary Assembly 45911 na FNYT01000025.1 unplaced-scaffold na na FNYT01000025.1 = NZ_FNYT01000025.1 Primary Assembly 45307 na FNYT01000026.1 unplaced-scaffold na na FNYT01000026.1 = NZ_FNYT01000026.1 Primary Assembly 42592 na FNYT01000027.1 unplaced-scaffold na na FNYT01000027.1 = NZ_FNYT01000027.1 Primary Assembly 41064 na FNYT01000028.1 unplaced-scaffold na na FNYT01000028.1 = NZ_FNYT01000028.1 Primary Assembly 40611 na FNYT01000029.1 unplaced-scaffold na na FNYT01000029.1 = NZ_FNYT01000029.1 Primary Assembly 37761 na FNYT01000030.1 unplaced-scaffold na na FNYT01000030.1 = NZ_FNYT01000030.1 Primary Assembly 37253 na FNYT01000031.1 unplaced-scaffold na na FNYT01000031.1 = NZ_FNYT01000031.1 Primary Assembly 36676 na FNYT01000032.1 unplaced-scaffold na na FNYT01000032.1 = NZ_FNYT01000032.1 Primary Assembly 33857 na FNYT01000033.1 unplaced-scaffold na na FNYT01000033.1 = NZ_FNYT01000033.1 Primary Assembly 33439 na FNYT01000034.1 unplaced-scaffold na na FNYT01000034.1 = NZ_FNYT01000034.1 Primary Assembly 29686 na FNYT01000035.1 unplaced-scaffold na na FNYT01000035.1 = NZ_FNYT01000035.1 Primary Assembly 29295 na FNYT01000036.1 unplaced-scaffold na na FNYT01000036.1 = NZ_FNYT01000036.1 Primary Assembly 29127 na FNYT01000037.1 unplaced-scaffold na na FNYT01000037.1 = NZ_FNYT01000037.1 Primary Assembly 29036 na FNYT01000038.1 unplaced-scaffold na na FNYT01000038.1 = NZ_FNYT01000038.1 Primary Assembly 20896 na FNYT01000039.1 unplaced-scaffold na na FNYT01000039.1 = NZ_FNYT01000039.1 Primary Assembly 18399 na FNYT01000040.1 unplaced-scaffold na na FNYT01000040.1 = NZ_FNYT01000040.1 Primary Assembly 16769 na FNYT01000041.1 unplaced-scaffold na na FNYT01000041.1 = NZ_FNYT01000041.1 Primary Assembly 16621 na FNYT01000042.1 unplaced-scaffold na na FNYT01000042.1 = NZ_FNYT01000042.1 Primary Assembly 14449 na FNYT01000043.1 unplaced-scaffold na na FNYT01000043.1 = NZ_FNYT01000043.1 Primary Assembly 14013 na FNYT01000044.1 unplaced-scaffold na na FNYT01000044.1 = NZ_FNYT01000044.1 Primary Assembly 13715 na FNYT01000045.1 unplaced-scaffold na na FNYT01000045.1 = NZ_FNYT01000045.1 Primary Assembly 12708 na FNYT01000046.1 unplaced-scaffold na na FNYT01000046.1 = NZ_FNYT01000046.1 Primary Assembly 12428 na FNYT01000047.1 unplaced-scaffold na na FNYT01000047.1 = NZ_FNYT01000047.1 Primary Assembly 12339 na FNYT01000048.1 unplaced-scaffold na na FNYT01000048.1 = NZ_FNYT01000048.1 Primary Assembly 11338 na FNYT01000049.1 unplaced-scaffold na na FNYT01000049.1 = NZ_FNYT01000049.1 Primary Assembly 10870 na FNYT01000050.1 unplaced-scaffold na na FNYT01000050.1 = NZ_FNYT01000050.1 Primary Assembly 9984 na FNYT01000051.1 unplaced-scaffold na na FNYT01000051.1 = NZ_FNYT01000051.1 Primary Assembly 8466 na FNYT01000052.1 unplaced-scaffold na na FNYT01000052.1 = NZ_FNYT01000052.1 Primary Assembly 8032 na FNYT01000053.1 unplaced-scaffold na na FNYT01000053.1 = NZ_FNYT01000053.1 Primary Assembly 7646 na FNYT01000054.1 unplaced-scaffold na na FNYT01000054.1 = NZ_FNYT01000054.1 Primary Assembly 5792 na FNYT01000055.1 unplaced-scaffold na na FNYT01000055.1 = NZ_FNYT01000055.1 Primary Assembly 5139 na FNYT01000056.1 unplaced-scaffold na na FNYT01000056.1 = NZ_FNYT01000056.1 Primary Assembly 2483 na FNYT01000057.1 unplaced-scaffold na na FNYT01000057.1 = NZ_FNYT01000057.1 Primary Assembly 2266 na FNYT01000058.1 unplaced-scaffold na na FNYT01000058.1 = NZ_FNYT01000058.1 Primary Assembly 1893 na FNYT01000059.1 unplaced-scaffold na na FNYT01000059.1 = NZ_FNYT01000059.1 Primary Assembly 1408 na FNYT01000060.1 unplaced-scaffold na na FNYT01000060.1 = NZ_FNYT01000060.1 Primary Assembly 1210 na