# Assembly name: IMG-taxon 2622736586 annotated assembly # Organism name: Pedobacter rhizosphaerae (CFB group bacteria) # Infraspecific name: strain=DSM 18610 # Taxid: 390241 # BioSample: SAMN04488023 # BioProject: PRJEB17018 # Submitter: DOE - JOINT GENOME INSTITUTE # Date: 2016-10-31 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: FOGG01 # Assembly method: ALLPATHS v. r46652 # Genome coverage: 238x # Sequencing technology: Illumina HiSeq 2500-1TB # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900111155.1 # RefSeq assembly accession: GCF_900111155.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900111154.1 GCF_900111154.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name FOGG01000001.1 unplaced-scaffold na na FOGG01000001.1 = NZ_FOGG01000001.1 Primary Assembly 364671 na FOGG01000002.1 unplaced-scaffold na na FOGG01000002.1 = NZ_FOGG01000002.1 Primary Assembly 335826 na FOGG01000003.1 unplaced-scaffold na na FOGG01000003.1 = NZ_FOGG01000003.1 Primary Assembly 305625 na FOGG01000004.1 unplaced-scaffold na na FOGG01000004.1 = NZ_FOGG01000004.1 Primary Assembly 280432 na FOGG01000005.1 unplaced-scaffold na na FOGG01000005.1 = NZ_FOGG01000005.1 Primary Assembly 254694 na FOGG01000006.1 unplaced-scaffold na na FOGG01000006.1 = NZ_FOGG01000006.1 Primary Assembly 245100 na FOGG01000007.1 unplaced-scaffold na na FOGG01000007.1 = NZ_FOGG01000007.1 Primary Assembly 243306 na FOGG01000008.1 unplaced-scaffold na na FOGG01000008.1 = NZ_FOGG01000008.1 Primary Assembly 194841 na FOGG01000009.1 unplaced-scaffold na na FOGG01000009.1 = NZ_FOGG01000009.1 Primary Assembly 184722 na FOGG01000010.1 unplaced-scaffold na na FOGG01000010.1 = NZ_FOGG01000010.1 Primary Assembly 174820 na FOGG01000011.1 unplaced-scaffold na na FOGG01000011.1 = NZ_FOGG01000011.1 Primary Assembly 171066 na FOGG01000012.1 unplaced-scaffold na na FOGG01000012.1 = NZ_FOGG01000012.1 Primary Assembly 160675 na FOGG01000013.1 unplaced-scaffold na na FOGG01000013.1 = NZ_FOGG01000013.1 Primary Assembly 155699 na FOGG01000014.1 unplaced-scaffold na na FOGG01000014.1 = NZ_FOGG01000014.1 Primary Assembly 147579 na FOGG01000015.1 unplaced-scaffold na na FOGG01000015.1 = NZ_FOGG01000015.1 Primary Assembly 134698 na FOGG01000016.1 unplaced-scaffold na na FOGG01000016.1 = NZ_FOGG01000016.1 Primary Assembly 123388 na FOGG01000017.1 unplaced-scaffold na na FOGG01000017.1 = NZ_FOGG01000017.1 Primary Assembly 120689 na FOGG01000018.1 unplaced-scaffold na na FOGG01000018.1 = NZ_FOGG01000018.1 Primary Assembly 113504 na FOGG01000019.1 unplaced-scaffold na na FOGG01000019.1 = NZ_FOGG01000019.1 Primary Assembly 111426 na FOGG01000020.1 unplaced-scaffold na na FOGG01000020.1 = NZ_FOGG01000020.1 Primary Assembly 96984 na FOGG01000021.1 unplaced-scaffold na na FOGG01000021.1 = NZ_FOGG01000021.1 Primary Assembly 91972 na FOGG01000022.1 unplaced-scaffold na na FOGG01000022.1 = NZ_FOGG01000022.1 Primary Assembly 72445 na FOGG01000023.1 unplaced-scaffold na na FOGG01000023.1 = NZ_FOGG01000023.1 Primary Assembly 72267 na FOGG01000024.1 unplaced-scaffold na na FOGG01000024.1 = NZ_FOGG01000024.1 Primary Assembly 69813 na FOGG01000025.1 unplaced-scaffold na na FOGG01000025.1 = NZ_FOGG01000025.1 Primary Assembly 64792 na FOGG01000026.1 unplaced-scaffold na na FOGG01000026.1 = NZ_FOGG01000026.1 Primary Assembly 64040 na FOGG01000027.1 unplaced-scaffold na na FOGG01000027.1 = NZ_FOGG01000027.1 Primary Assembly 61471 na FOGG01000028.1 unplaced-scaffold na na FOGG01000028.1 = NZ_FOGG01000028.1 Primary Assembly 60679 na FOGG01000029.1 unplaced-scaffold na na FOGG01000029.1 = NZ_FOGG01000029.1 Primary Assembly 60582 na FOGG01000030.1 unplaced-scaffold na na FOGG01000030.1 = NZ_FOGG01000030.1 Primary Assembly 59731 na FOGG01000031.1 unplaced-scaffold na na FOGG01000031.1 = NZ_FOGG01000031.1 Primary Assembly 57681 na FOGG01000032.1 unplaced-scaffold na na FOGG01000032.1 = NZ_FOGG01000032.1 Primary Assembly 55727 na FOGG01000033.1 unplaced-scaffold na na FOGG01000033.1 = NZ_FOGG01000033.1 Primary Assembly 55522 na FOGG01000034.1 unplaced-scaffold na na FOGG01000034.1 = NZ_FOGG01000034.1 Primary Assembly 55031 na FOGG01000035.1 unplaced-scaffold na na FOGG01000035.1 = NZ_FOGG01000035.1 Primary Assembly 54904 na FOGG01000036.1 unplaced-scaffold na na FOGG01000036.1 = NZ_FOGG01000036.1 Primary Assembly 51525 na FOGG01000037.1 unplaced-scaffold na na FOGG01000037.1 = NZ_FOGG01000037.1 Primary Assembly 49074 na FOGG01000038.1 unplaced-scaffold na na FOGG01000038.1 = NZ_FOGG01000038.1 Primary Assembly 46490 na FOGG01000039.1 unplaced-scaffold na na FOGG01000039.1 = NZ_FOGG01000039.1 Primary Assembly 43973 na FOGG01000040.1 unplaced-scaffold na na FOGG01000040.1 = NZ_FOGG01000040.1 Primary Assembly 43911 na FOGG01000041.1 unplaced-scaffold na na FOGG01000041.1 = NZ_FOGG01000041.1 Primary Assembly 43322 na FOGG01000042.1 unplaced-scaffold na na FOGG01000042.1 = NZ_FOGG01000042.1 Primary Assembly 40962 na FOGG01000043.1 unplaced-scaffold na na FOGG01000043.1 = NZ_FOGG01000043.1 Primary Assembly 40448 na FOGG01000044.1 unplaced-scaffold na na FOGG01000044.1 = NZ_FOGG01000044.1 Primary Assembly 37502 na FOGG01000045.1 unplaced-scaffold na na FOGG01000045.1 = NZ_FOGG01000045.1 Primary Assembly 32446 na FOGG01000046.1 unplaced-scaffold na na FOGG01000046.1 = NZ_FOGG01000046.1 Primary Assembly 30275 na FOGG01000047.1 unplaced-scaffold na na FOGG01000047.1 = NZ_FOGG01000047.1 Primary Assembly 28144 na FOGG01000048.1 unplaced-scaffold na na FOGG01000048.1 = NZ_FOGG01000048.1 Primary Assembly 27931 na FOGG01000049.1 unplaced-scaffold na na FOGG01000049.1 = NZ_FOGG01000049.1 Primary Assembly 26985 na FOGG01000050.1 unplaced-scaffold na na FOGG01000050.1 = NZ_FOGG01000050.1 Primary Assembly 27005 na FOGG01000051.1 unplaced-scaffold na na FOGG01000051.1 = NZ_FOGG01000051.1 Primary Assembly 26665 na FOGG01000052.1 unplaced-scaffold na na FOGG01000052.1 = NZ_FOGG01000052.1 Primary Assembly 26575 na FOGG01000053.1 unplaced-scaffold na na FOGG01000053.1 = NZ_FOGG01000053.1 Primary Assembly 23843 na FOGG01000054.1 unplaced-scaffold na na FOGG01000054.1 = NZ_FOGG01000054.1 Primary Assembly 23841 na FOGG01000055.1 unplaced-scaffold na na FOGG01000055.1 = NZ_FOGG01000055.1 Primary Assembly 22055 na FOGG01000056.1 unplaced-scaffold na na FOGG01000056.1 = NZ_FOGG01000056.1 Primary Assembly 21841 na FOGG01000057.1 unplaced-scaffold na na FOGG01000057.1 = NZ_FOGG01000057.1 Primary Assembly 21366 na FOGG01000058.1 unplaced-scaffold na na FOGG01000058.1 = NZ_FOGG01000058.1 Primary Assembly 20116 na FOGG01000059.1 unplaced-scaffold na na FOGG01000059.1 = NZ_FOGG01000059.1 Primary Assembly 19868 na FOGG01000060.1 unplaced-scaffold na na FOGG01000060.1 = NZ_FOGG01000060.1 Primary Assembly 16965 na FOGG01000061.1 unplaced-scaffold na na FOGG01000061.1 = NZ_FOGG01000061.1 Primary Assembly 14445 na FOGG01000062.1 unplaced-scaffold na na FOGG01000062.1 = NZ_FOGG01000062.1 Primary Assembly 11437 na FOGG01000063.1 unplaced-scaffold na na FOGG01000063.1 = NZ_FOGG01000063.1 Primary Assembly 11461 na FOGG01000064.1 unplaced-scaffold na na FOGG01000064.1 = NZ_FOGG01000064.1 Primary Assembly 10915 na FOGG01000065.1 unplaced-scaffold na na FOGG01000065.1 = NZ_FOGG01000065.1 Primary Assembly 10615 na FOGG01000066.1 unplaced-scaffold na na FOGG01000066.1 = NZ_FOGG01000066.1 Primary Assembly 9815 na FOGG01000067.1 unplaced-scaffold na na FOGG01000067.1 = NZ_FOGG01000067.1 Primary Assembly 8989 na FOGG01000068.1 unplaced-scaffold na na FOGG01000068.1 = NZ_FOGG01000068.1 Primary Assembly 7572 na FOGG01000069.1 unplaced-scaffold na na FOGG01000069.1 = NZ_FOGG01000069.1 Primary Assembly 6305 na FOGG01000070.1 unplaced-scaffold na na FOGG01000070.1 = NZ_FOGG01000070.1 Primary Assembly 4467 na FOGG01000071.1 unplaced-scaffold na na FOGG01000071.1 = NZ_FOGG01000071.1 Primary Assembly 3888 na FOGG01000072.1 unplaced-scaffold na na FOGG01000072.1 = NZ_FOGG01000072.1 Primary Assembly 2520 na FOGG01000073.1 unplaced-scaffold na na FOGG01000073.1 = NZ_FOGG01000073.1 Primary Assembly 2262 na FOGG01000074.1 unplaced-scaffold na na FOGG01000074.1 = NZ_FOGG01000074.1 Primary Assembly 2229 na FOGG01000075.1 unplaced-scaffold na na FOGG01000075.1 = NZ_FOGG01000075.1 Primary Assembly 1948 na FOGG01000076.1 unplaced-scaffold na na FOGG01000076.1 = NZ_FOGG01000076.1 Primary Assembly 1582 na FOGG01000077.1 unplaced-scaffold na na FOGG01000077.1 = NZ_FOGG01000077.1 Primary Assembly 1575 na FOGG01000078.1 unplaced-scaffold na na FOGG01000078.1 = NZ_FOGG01000078.1 Primary Assembly 1560 na FOGG01000079.1 unplaced-scaffold na na FOGG01000079.1 = NZ_FOGG01000079.1 Primary Assembly 1554 na FOGG01000080.1 unplaced-scaffold na na FOGG01000080.1 = NZ_FOGG01000080.1 Primary Assembly 1281 na FOGG01000081.1 unplaced-scaffold na na FOGG01000081.1 = NZ_FOGG01000081.1 Primary Assembly 1214 na FOGG01000082.1 unplaced-scaffold na na FOGG01000082.1 = NZ_FOGG01000082.1 Primary Assembly 1090 na FOGG01000083.1 unplaced-scaffold na na FOGG01000083.1 = NZ_FOGG01000083.1 Primary Assembly 1048 na