# Assembly name: IMG-taxon 2597490347 annotated assembly # Organism name: Rugamonas rubra (b-proteobacteria) # Infraspecific name: strain=ATCC 43154 # Taxid: 758825 # BioSample: SAMN02982985 # BioProject: PRJEB17471 # Submitter: DOE - JOINT GENOME INSTITUTE # Date: 2016-11-05 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: FOTW01 # Assembly method: vpAllpaths v. r46652 # Genome coverage: 140x # Sequencing technology: Illumina HiSeq 2500 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900114705.1 # RefSeq assembly accession: GCF_900114705.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900114704.1 GCF_900114704.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name FOTW01000001.1 unplaced-scaffold na na FOTW01000001.1 = NZ_FOTW01000001.1 Primary Assembly 1411 na FOTW01000002.1 unplaced-scaffold na na FOTW01000002.1 = NZ_FOTW01000002.1 Primary Assembly 878 na FOTW01000003.1 unplaced-scaffold na na FOTW01000003.1 = NZ_FOTW01000003.1 Primary Assembly 1673 na FOTW01000004.1 unplaced-scaffold na na FOTW01000004.1 = NZ_FOTW01000004.1 Primary Assembly 575274 na FOTW01000005.1 unplaced-scaffold na na FOTW01000005.1 = NZ_FOTW01000005.1 Primary Assembly 442728 na FOTW01000006.1 unplaced-scaffold na na FOTW01000006.1 = NZ_FOTW01000006.1 Primary Assembly 428045 na FOTW01000007.1 unplaced-scaffold na na FOTW01000007.1 = NZ_FOTW01000007.1 Primary Assembly 334265 na FOTW01000008.1 unplaced-scaffold na na FOTW01000008.1 = NZ_FOTW01000008.1 Primary Assembly 315300 na FOTW01000009.1 unplaced-scaffold na na FOTW01000009.1 = NZ_FOTW01000009.1 Primary Assembly 313151 na FOTW01000010.1 unplaced-scaffold na na FOTW01000010.1 = NZ_FOTW01000010.1 Primary Assembly 310718 na FOTW01000011.1 unplaced-scaffold na na FOTW01000011.1 = NZ_FOTW01000011.1 Primary Assembly 296649 na FOTW01000012.1 unplaced-scaffold na na FOTW01000012.1 = NZ_FOTW01000012.1 Primary Assembly 210440 na FOTW01000013.1 unplaced-scaffold na na FOTW01000013.1 = NZ_FOTW01000013.1 Primary Assembly 208763 na FOTW01000014.1 unplaced-scaffold na na FOTW01000014.1 = NZ_FOTW01000014.1 Primary Assembly 205522 na FOTW01000015.1 unplaced-scaffold na na FOTW01000015.1 = NZ_FOTW01000015.1 Primary Assembly 202256 na FOTW01000016.1 unplaced-scaffold na na FOTW01000016.1 = NZ_FOTW01000016.1 Primary Assembly 197007 na FOTW01000017.1 unplaced-scaffold na na FOTW01000017.1 = NZ_FOTW01000017.1 Primary Assembly 194089 na FOTW01000018.1 unplaced-scaffold na na FOTW01000018.1 = NZ_FOTW01000018.1 Primary Assembly 171891 na FOTW01000019.1 unplaced-scaffold na na FOTW01000019.1 = NZ_FOTW01000019.1 Primary Assembly 171508 na FOTW01000020.1 unplaced-scaffold na na FOTW01000020.1 = NZ_FOTW01000020.1 Primary Assembly 170879 na FOTW01000021.1 unplaced-scaffold na na FOTW01000021.1 = NZ_FOTW01000021.1 Primary Assembly 169787 na FOTW01000022.1 unplaced-scaffold na na FOTW01000022.1 = NZ_FOTW01000022.1 Primary Assembly 146199 na FOTW01000023.1 unplaced-scaffold na na FOTW01000023.1 = NZ_FOTW01000023.1 Primary Assembly 135821 na FOTW01000024.1 unplaced-scaffold na na FOTW01000024.1 = NZ_FOTW01000024.1 Primary Assembly 129434 na FOTW01000025.1 unplaced-scaffold na na FOTW01000025.1 = NZ_FOTW01000025.1 Primary Assembly 127271 na FOTW01000026.1 unplaced-scaffold na na FOTW01000026.1 = NZ_FOTW01000026.1 Primary Assembly 107472 na FOTW01000027.1 unplaced-scaffold na na FOTW01000027.1 = NZ_FOTW01000027.1 Primary Assembly 104622 na FOTW01000028.1 unplaced-scaffold na na FOTW01000028.1 = NZ_FOTW01000028.1 Primary Assembly 95340 na FOTW01000029.1 unplaced-scaffold na na FOTW01000029.1 = NZ_FOTW01000029.1 Primary Assembly 92780 na FOTW01000030.1 unplaced-scaffold na na FOTW01000030.1 = NZ_FOTW01000030.1 Primary Assembly 80706 na FOTW01000031.1 unplaced-scaffold na na FOTW01000031.1 = NZ_FOTW01000031.1 Primary Assembly 70799 na FOTW01000032.1 unplaced-scaffold na na FOTW01000032.1 = NZ_FOTW01000032.1 Primary Assembly 70055 na FOTW01000033.1 unplaced-scaffold na na FOTW01000033.1 = NZ_FOTW01000033.1 Primary Assembly 68080 na FOTW01000034.1 unplaced-scaffold na na FOTW01000034.1 = NZ_FOTW01000034.1 Primary Assembly 57425 na FOTW01000035.1 unplaced-scaffold na na FOTW01000035.1 = NZ_FOTW01000035.1 Primary Assembly 56627 na FOTW01000036.1 unplaced-scaffold na na FOTW01000036.1 = NZ_FOTW01000036.1 Primary Assembly 53338 na FOTW01000037.1 unplaced-scaffold na na FOTW01000037.1 = NZ_FOTW01000037.1 Primary Assembly 48765 na FOTW01000038.1 unplaced-scaffold na na FOTW01000038.1 = NZ_FOTW01000038.1 Primary Assembly 44750 na FOTW01000039.1 unplaced-scaffold na na FOTW01000039.1 = NZ_FOTW01000039.1 Primary Assembly 39236 na FOTW01000040.1 unplaced-scaffold na na FOTW01000040.1 = NZ_FOTW01000040.1 Primary Assembly 30087 na FOTW01000041.1 unplaced-scaffold na na FOTW01000041.1 = NZ_FOTW01000041.1 Primary Assembly 30058 na FOTW01000042.1 unplaced-scaffold na na FOTW01000042.1 = NZ_FOTW01000042.1 Primary Assembly 27631 na FOTW01000043.1 unplaced-scaffold na na FOTW01000043.1 = NZ_FOTW01000043.1 Primary Assembly 24085 na FOTW01000044.1 unplaced-scaffold na na FOTW01000044.1 = NZ_FOTW01000044.1 Primary Assembly 18427 na FOTW01000045.1 unplaced-scaffold na na FOTW01000045.1 = NZ_FOTW01000045.1 Primary Assembly 17817 na FOTW01000046.1 unplaced-scaffold na na FOTW01000046.1 = NZ_FOTW01000046.1 Primary Assembly 16723 na FOTW01000047.1 unplaced-scaffold na na FOTW01000047.1 = NZ_FOTW01000047.1 Primary Assembly 16658 na FOTW01000048.1 unplaced-scaffold na na FOTW01000048.1 = NZ_FOTW01000048.1 Primary Assembly 15639 na FOTW01000049.1 unplaced-scaffold na na FOTW01000049.1 = NZ_FOTW01000049.1 Primary Assembly 14596 na FOTW01000050.1 unplaced-scaffold na na FOTW01000050.1 = NZ_FOTW01000050.1 Primary Assembly 14590 na FOTW01000051.1 unplaced-scaffold na na FOTW01000051.1 = NZ_FOTW01000051.1 Primary Assembly 13905 na FOTW01000052.1 unplaced-scaffold na na FOTW01000052.1 = NZ_FOTW01000052.1 Primary Assembly 13705 na FOTW01000053.1 unplaced-scaffold na na FOTW01000053.1 = NZ_FOTW01000053.1 Primary Assembly 12772 na FOTW01000054.1 unplaced-scaffold na na FOTW01000054.1 = NZ_FOTW01000054.1 Primary Assembly 11925 na FOTW01000055.1 unplaced-scaffold na na FOTW01000055.1 = NZ_FOTW01000055.1 Primary Assembly 11644 na FOTW01000056.1 unplaced-scaffold na na FOTW01000056.1 = NZ_FOTW01000056.1 Primary Assembly 11610 na FOTW01000057.1 unplaced-scaffold na na FOTW01000057.1 = NZ_FOTW01000057.1 Primary Assembly 11322 na FOTW01000058.1 unplaced-scaffold na na FOTW01000058.1 = NZ_FOTW01000058.1 Primary Assembly 8620 na FOTW01000059.1 unplaced-scaffold na na FOTW01000059.1 = NZ_FOTW01000059.1 Primary Assembly 6443 na FOTW01000060.1 unplaced-scaffold na na FOTW01000060.1 = NZ_FOTW01000060.1 Primary Assembly 4753 na FOTW01000061.1 unplaced-scaffold na na FOTW01000061.1 = NZ_FOTW01000061.1 Primary Assembly 4698 na FOTW01000062.1 unplaced-scaffold na na FOTW01000062.1 = NZ_FOTW01000062.1 Primary Assembly 3744 na FOTW01000063.1 unplaced-scaffold na na FOTW01000063.1 = NZ_FOTW01000063.1 Primary Assembly 3503 na FOTW01000064.1 unplaced-scaffold na na FOTW01000064.1 = NZ_FOTW01000064.1 Primary Assembly 3090 na FOTW01000065.1 unplaced-scaffold na na FOTW01000065.1 = NZ_FOTW01000065.1 Primary Assembly 2781 na FOTW01000066.1 unplaced-scaffold na na FOTW01000066.1 = NZ_FOTW01000066.1 Primary Assembly 2517 na FOTW01000067.1 unplaced-scaffold na na FOTW01000067.1 = NZ_FOTW01000067.1 Primary Assembly 2269 na FOTW01000068.1 unplaced-scaffold na na FOTW01000068.1 = NZ_FOTW01000068.1 Primary Assembly 2107 na FOTW01000069.1 unplaced-scaffold na na FOTW01000069.1 = NZ_FOTW01000069.1 Primary Assembly 2088 na FOTW01000070.1 unplaced-scaffold na na FOTW01000070.1 = NZ_FOTW01000070.1 Primary Assembly 2003 na FOTW01000071.1 unplaced-scaffold na na FOTW01000071.1 = NZ_FOTW01000071.1 Primary Assembly 1887 na FOTW01000072.1 unplaced-scaffold na na FOTW01000072.1 = NZ_FOTW01000072.1 Primary Assembly 1644 na FOTW01000073.1 unplaced-scaffold na na FOTW01000073.1 = NZ_FOTW01000073.1 Primary Assembly 1640 na FOTW01000074.1 unplaced-scaffold na na FOTW01000074.1 = NZ_FOTW01000074.1 Primary Assembly 1627 na FOTW01000075.1 unplaced-scaffold na na FOTW01000075.1 = NZ_FOTW01000075.1 Primary Assembly 1570 na FOTW01000076.1 unplaced-scaffold na na FOTW01000076.1 = NZ_FOTW01000076.1 Primary Assembly 1564 na FOTW01000077.1 unplaced-scaffold na na FOTW01000077.1 = NZ_FOTW01000077.1 Primary Assembly 1512 na FOTW01000078.1 unplaced-scaffold na na FOTW01000078.1 = NZ_FOTW01000078.1 Primary Assembly 1502 na FOTW01000079.1 unplaced-scaffold na na FOTW01000079.1 = NZ_FOTW01000079.1 Primary Assembly 1366 na FOTW01000080.1 unplaced-scaffold na na FOTW01000080.1 = NZ_FOTW01000080.1 Primary Assembly 1356 na FOTW01000081.1 unplaced-scaffold na na FOTW01000081.1 = NZ_FOTW01000081.1 Primary Assembly 1048 na FOTW01000082.1 unplaced-scaffold na na FOTW01000082.1 = NZ_FOTW01000082.1 Primary Assembly 1023 na