# Assembly name: IMG-taxon 2700988697 annotated assembly # Organism name: Shimia gijangensis (a-proteobacteria) # Infraspecific name: strain=DSM 100564 # Taxid: 1470563 # BioSample: SAMN05444000 # BioProject: PRJEB18318 # Submitter: DOE - JOINT GENOME INSTITUTE # Date: 2016-12-03 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: FQZQ01 # Assembly method: spades v. 3.6.2 # Genome coverage: 184x # Sequencing technology: Illumina HiSeq 2500-1TB # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900142085.1 # RefSeq assembly accession: GCF_900142085.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900142084.1 GCF_900142084.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig1 unplaced-scaffold na na FQZQ01000001.1 = NZ_FQZQ01000001.1 Primary Assembly 321517 na contig2 unplaced-scaffold na na FQZQ01000002.1 = NZ_FQZQ01000002.1 Primary Assembly 301282 na contig3 unplaced-scaffold na na FQZQ01000003.1 = NZ_FQZQ01000003.1 Primary Assembly 285828 na contig4 unplaced-scaffold na na FQZQ01000004.1 = NZ_FQZQ01000004.1 Primary Assembly 235858 na contig5 unplaced-scaffold na na FQZQ01000005.1 = NZ_FQZQ01000005.1 Primary Assembly 212833 na contig6 unplaced-scaffold na na FQZQ01000006.1 = NZ_FQZQ01000006.1 Primary Assembly 192176 na contig7 unplaced-scaffold na na FQZQ01000007.1 = NZ_FQZQ01000007.1 Primary Assembly 174434 na contig8 unplaced-scaffold na na FQZQ01000008.1 = NZ_FQZQ01000008.1 Primary Assembly 142092 na contig9 unplaced-scaffold na na FQZQ01000009.1 = NZ_FQZQ01000009.1 Primary Assembly 140648 na contig10 unplaced-scaffold na na FQZQ01000010.1 = NZ_FQZQ01000010.1 Primary Assembly 136288 na contig11 unplaced-scaffold na na FQZQ01000011.1 = NZ_FQZQ01000011.1 Primary Assembly 133743 na contig12 unplaced-scaffold na na FQZQ01000012.1 = NZ_FQZQ01000012.1 Primary Assembly 129007 na contig13 unplaced-scaffold na na FQZQ01000013.1 = NZ_FQZQ01000013.1 Primary Assembly 123219 na contig14 unplaced-scaffold na na FQZQ01000014.1 = NZ_FQZQ01000014.1 Primary Assembly 121617 na contig15 unplaced-scaffold na na FQZQ01000015.1 = NZ_FQZQ01000015.1 Primary Assembly 117884 na contig16 unplaced-scaffold na na FQZQ01000016.1 = NZ_FQZQ01000016.1 Primary Assembly 106876 na contig17 unplaced-scaffold na na FQZQ01000017.1 = NZ_FQZQ01000017.1 Primary Assembly 96196 na contig18 unplaced-scaffold na na FQZQ01000018.1 = NZ_FQZQ01000018.1 Primary Assembly 81776 na contig19 unplaced-scaffold na na FQZQ01000019.1 = NZ_FQZQ01000019.1 Primary Assembly 77998 na contig20 unplaced-scaffold na na FQZQ01000020.1 = NZ_FQZQ01000020.1 Primary Assembly 77143 na contig21 unplaced-scaffold na na FQZQ01000021.1 = NZ_FQZQ01000021.1 Primary Assembly 65894 na contig22 unplaced-scaffold na na FQZQ01000022.1 = NZ_FQZQ01000022.1 Primary Assembly 64897 na contig23 unplaced-scaffold na na FQZQ01000023.1 = NZ_FQZQ01000023.1 Primary Assembly 63029 na contig24 unplaced-scaffold na na FQZQ01000024.1 = NZ_FQZQ01000024.1 Primary Assembly 60948 na contig25 unplaced-scaffold na na FQZQ01000025.1 = NZ_FQZQ01000025.1 Primary Assembly 57730 na contig26 unplaced-scaffold na na FQZQ01000026.1 = NZ_FQZQ01000026.1 Primary Assembly 55776 na contig27 unplaced-scaffold na na FQZQ01000027.1 = NZ_FQZQ01000027.1 Primary Assembly 53760 na contig28 unplaced-scaffold na na FQZQ01000028.1 = NZ_FQZQ01000028.1 Primary Assembly 37019 na contig29 unplaced-scaffold na na FQZQ01000029.1 = NZ_FQZQ01000029.1 Primary Assembly 33376 na contig30 unplaced-scaffold na na FQZQ01000030.1 = NZ_FQZQ01000030.1 Primary Assembly 31135 na contig31 unplaced-scaffold na na FQZQ01000031.1 = NZ_FQZQ01000031.1 Primary Assembly 28341 na contig32 unplaced-scaffold na na FQZQ01000032.1 = NZ_FQZQ01000032.1 Primary Assembly 27527 na contig33 unplaced-scaffold na na FQZQ01000033.1 = NZ_FQZQ01000033.1 Primary Assembly 26376 na contig34 unplaced-scaffold na na FQZQ01000034.1 = NZ_FQZQ01000034.1 Primary Assembly 22779 na contig35 unplaced-scaffold na na FQZQ01000035.1 = NZ_FQZQ01000035.1 Primary Assembly 19580 na contig36 unplaced-scaffold na na FQZQ01000036.1 = NZ_FQZQ01000036.1 Primary Assembly 17910 na contig37 unplaced-scaffold na na FQZQ01000037.1 = NZ_FQZQ01000037.1 Primary Assembly 17897 na contig38 unplaced-scaffold na na FQZQ01000038.1 = NZ_FQZQ01000038.1 Primary Assembly 17286 na contig39 unplaced-scaffold na na FQZQ01000039.1 = NZ_FQZQ01000039.1 Primary Assembly 13866 na contig40 unplaced-scaffold na na FQZQ01000040.1 = NZ_FQZQ01000040.1 Primary Assembly 13427 na contig41 unplaced-scaffold na na FQZQ01000041.1 = NZ_FQZQ01000041.1 Primary Assembly 13074 na contig42 unplaced-scaffold na na FQZQ01000042.1 = NZ_FQZQ01000042.1 Primary Assembly 11656 na contig43 unplaced-scaffold na na FQZQ01000043.1 = NZ_FQZQ01000043.1 Primary Assembly 11507 na contig44 unplaced-scaffold na na FQZQ01000044.1 = NZ_FQZQ01000044.1 Primary Assembly 11355 na contig45 unplaced-scaffold na na FQZQ01000045.1 = NZ_FQZQ01000045.1 Primary Assembly 10925 na contig46 unplaced-scaffold na na FQZQ01000046.1 = NZ_FQZQ01000046.1 Primary Assembly 8433 na contig47 unplaced-scaffold na na FQZQ01000047.1 = NZ_FQZQ01000047.1 Primary Assembly 7130 na contig48 unplaced-scaffold na na FQZQ01000048.1 = NZ_FQZQ01000048.1 Primary Assembly 6848 na contig49 unplaced-scaffold na na FQZQ01000049.1 = NZ_FQZQ01000049.1 Primary Assembly 6774 na contig50 unplaced-scaffold na na FQZQ01000050.1 = NZ_FQZQ01000050.1 Primary Assembly 6484 na contig51 unplaced-scaffold na na FQZQ01000051.1 = NZ_FQZQ01000051.1 Primary Assembly 6098 na contig52 unplaced-scaffold na na FQZQ01000052.1 = NZ_FQZQ01000052.1 Primary Assembly 5802 na contig53 unplaced-scaffold na na FQZQ01000053.1 = NZ_FQZQ01000053.1 Primary Assembly 5574 na contig54 unplaced-scaffold na na FQZQ01000054.1 = NZ_FQZQ01000054.1 Primary Assembly 3698 na contig55 unplaced-scaffold na na FQZQ01000055.1 = NZ_FQZQ01000055.1 Primary Assembly 3584 na contig56 unplaced-scaffold na na FQZQ01000056.1 = NZ_FQZQ01000056.1 Primary Assembly 2971 na contig57 unplaced-scaffold na na FQZQ01000057.1 = NZ_FQZQ01000057.1 Primary Assembly 2386 na contig58 unplaced-scaffold na na FQZQ01000058.1 = NZ_FQZQ01000058.1 Primary Assembly 2361 na contig59 unplaced-scaffold na na FQZQ01000059.1 = NZ_FQZQ01000059.1 Primary Assembly 2183 na contig60 unplaced-scaffold na na FQZQ01000060.1 = NZ_FQZQ01000060.1 Primary Assembly 2099 na contig61 unplaced-scaffold na na FQZQ01000061.1 = NZ_FQZQ01000061.1 Primary Assembly 1966 na contig62 unplaced-scaffold na na FQZQ01000062.1 = NZ_FQZQ01000062.1 Primary Assembly 1927 na contig63 unplaced-scaffold na na FQZQ01000063.1 = NZ_FQZQ01000063.1 Primary Assembly 1833 na contig64 unplaced-scaffold na na FQZQ01000064.1 = NZ_FQZQ01000064.1 Primary Assembly 1696 na contig65 unplaced-scaffold na na FQZQ01000065.1 = NZ_FQZQ01000065.1 Primary Assembly 1666 na contig66 unplaced-scaffold na na FQZQ01000066.1 = NZ_FQZQ01000066.1 Primary Assembly 1658 na contig67 unplaced-scaffold na na FQZQ01000067.1 = NZ_FQZQ01000067.1 Primary Assembly 1577 na contig68 unplaced-scaffold na na FQZQ01000068.1 = NZ_FQZQ01000068.1 Primary Assembly 1534 na contig69 unplaced-scaffold na na FQZQ01000069.1 = NZ_FQZQ01000069.1 Primary Assembly 1512 na contig70 unplaced-scaffold na na FQZQ01000070.1 = NZ_FQZQ01000070.1 Primary Assembly 1504 na contig71 unplaced-scaffold na na FQZQ01000071.1 = NZ_FQZQ01000071.1 Primary Assembly 1367 na contig72 unplaced-scaffold na na FQZQ01000072.1 = NZ_FQZQ01000072.1 Primary Assembly 1315 na contig73 unplaced-scaffold na na FQZQ01000073.1 = NZ_FQZQ01000073.1 Primary Assembly 1308 na contig74 unplaced-scaffold na na FQZQ01000074.1 = NZ_FQZQ01000074.1 Primary Assembly 1200 na contig75 unplaced-scaffold na na FQZQ01000075.1 = NZ_FQZQ01000075.1 Primary Assembly 1187 na contig76 unplaced-scaffold na na FQZQ01000076.1 = NZ_FQZQ01000076.1 Primary Assembly 1186 na contig77 unplaced-scaffold na na FQZQ01000077.1 = NZ_FQZQ01000077.1 Primary Assembly 1169 na contig78 unplaced-scaffold na na FQZQ01000078.1 = NZ_FQZQ01000078.1 Primary Assembly 1055 na