# Assembly name: IMG-taxon 2706795025 annotated assembly # Organism name: Alkalispirochaeta americana (spirochetes) # Infraspecific name: strain=ASpG1 # Taxid: 159291 # BioSample: SAMN05920897 # BioProject: PRJEB18843 # Submitter: DOE - JOINT GENOME INSTITUTE # Date: 2017-01-14 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: FTMS01 # Assembly method: spades v. 3.6.2 # Genome coverage: 236x # Sequencing technology: Illumina HiSeq 2500,Illumina HiSeq 2500-1TB,PacBio RS,PacBio RS II # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900156105.1 # RefSeq assembly accession: GCF_900156105.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900156104.1 GCF_900156104.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name FTMS01000001.1 unplaced-scaffold na na FTMS01000001.1 = NZ_FTMS01000001.1 Primary Assembly 365035 na FTMS01000002.1 unplaced-scaffold na na FTMS01000002.1 = NZ_FTMS01000002.1 Primary Assembly 275921 na FTMS01000003.1 unplaced-scaffold na na FTMS01000003.1 = NZ_FTMS01000003.1 Primary Assembly 221145 na FTMS01000004.1 unplaced-scaffold na na FTMS01000004.1 = NZ_FTMS01000004.1 Primary Assembly 205449 na FTMS01000005.1 unplaced-scaffold na na FTMS01000005.1 = NZ_FTMS01000005.1 Primary Assembly 176741 na FTMS01000006.1 unplaced-scaffold na na FTMS01000006.1 = NZ_FTMS01000006.1 Primary Assembly 166489 na FTMS01000007.1 unplaced-scaffold na na FTMS01000007.1 = NZ_FTMS01000007.1 Primary Assembly 165805 na FTMS01000008.1 unplaced-scaffold na na FTMS01000008.1 = NZ_FTMS01000008.1 Primary Assembly 162526 na FTMS01000009.1 unplaced-scaffold na na FTMS01000009.1 = NZ_FTMS01000009.1 Primary Assembly 152548 na FTMS01000010.1 unplaced-scaffold na na FTMS01000010.1 = NZ_FTMS01000010.1 Primary Assembly 147894 na FTMS01000011.1 unplaced-scaffold na na FTMS01000011.1 = NZ_FTMS01000011.1 Primary Assembly 143466 na FTMS01000012.1 unplaced-scaffold na na FTMS01000012.1 = NZ_FTMS01000012.1 Primary Assembly 141496 na FTMS01000013.1 unplaced-scaffold na na FTMS01000013.1 = NZ_FTMS01000013.1 Primary Assembly 120708 na FTMS01000014.1 unplaced-scaffold na na FTMS01000014.1 = NZ_FTMS01000014.1 Primary Assembly 109368 na FTMS01000015.1 unplaced-scaffold na na FTMS01000015.1 = NZ_FTMS01000015.1 Primary Assembly 106424 na FTMS01000016.1 unplaced-scaffold na na FTMS01000016.1 = NZ_FTMS01000016.1 Primary Assembly 102069 na FTMS01000017.1 unplaced-scaffold na na FTMS01000017.1 = NZ_FTMS01000017.1 Primary Assembly 100962 na FTMS01000018.1 unplaced-scaffold na na FTMS01000018.1 = NZ_FTMS01000018.1 Primary Assembly 77488 na FTMS01000019.1 unplaced-scaffold na na FTMS01000019.1 = NZ_FTMS01000019.1 Primary Assembly 57225 na FTMS01000020.1 unplaced-scaffold na na FTMS01000020.1 = NZ_FTMS01000020.1 Primary Assembly 34904 na FTMS01000021.1 unplaced-scaffold na na FTMS01000021.1 = NZ_FTMS01000021.1 Primary Assembly 24089 na FTMS01000022.1 unplaced-scaffold na na FTMS01000022.1 = NZ_FTMS01000022.1 Primary Assembly 16736 na FTMS01000023.1 unplaced-scaffold na na FTMS01000023.1 = NZ_FTMS01000023.1 Primary Assembly 16467 na FTMS01000024.1 unplaced-scaffold na na FTMS01000024.1 = NZ_FTMS01000024.1 Primary Assembly 15161 na FTMS01000025.1 unplaced-scaffold na na FTMS01000025.1 = NZ_FTMS01000025.1 Primary Assembly 14615 na FTMS01000026.1 unplaced-scaffold na na FTMS01000026.1 = NZ_FTMS01000026.1 Primary Assembly 14181 na FTMS01000027.1 unplaced-scaffold na na FTMS01000027.1 = NZ_FTMS01000027.1 Primary Assembly 14097 na FTMS01000028.1 unplaced-scaffold na na FTMS01000028.1 = NZ_FTMS01000028.1 Primary Assembly 13167 na FTMS01000029.1 unplaced-scaffold na na FTMS01000029.1 = NZ_FTMS01000029.1 Primary Assembly 11728 na FTMS01000030.1 unplaced-scaffold na na FTMS01000030.1 = NZ_FTMS01000030.1 Primary Assembly 11659 na FTMS01000031.1 unplaced-scaffold na na FTMS01000031.1 = NZ_FTMS01000031.1 Primary Assembly 11573 na FTMS01000032.1 unplaced-scaffold na na FTMS01000032.1 = NZ_FTMS01000032.1 Primary Assembly 8079 na FTMS01000033.1 unplaced-scaffold na na FTMS01000033.1 = NZ_FTMS01000033.1 Primary Assembly 6930 na FTMS01000034.1 unplaced-scaffold na na FTMS01000034.1 = NZ_FTMS01000034.1 Primary Assembly 6907 na FTMS01000035.1 unplaced-scaffold na na FTMS01000035.1 = NZ_FTMS01000035.1 Primary Assembly 6709 na FTMS01000036.1 unplaced-scaffold na na FTMS01000036.1 = NZ_FTMS01000036.1 Primary Assembly 6551 na FTMS01000037.1 unplaced-scaffold na na FTMS01000037.1 = NZ_FTMS01000037.1 Primary Assembly 6420 na FTMS01000038.1 unplaced-scaffold na na FTMS01000038.1 = NZ_FTMS01000038.1 Primary Assembly 5773 na FTMS01000039.1 unplaced-scaffold na na FTMS01000039.1 = NZ_FTMS01000039.1 Primary Assembly 5530 na FTMS01000040.1 unplaced-scaffold na na FTMS01000040.1 = NZ_FTMS01000040.1 Primary Assembly 4810 na FTMS01000041.1 unplaced-scaffold na na FTMS01000041.1 = NZ_FTMS01000041.1 Primary Assembly 4715 na FTMS01000042.1 unplaced-scaffold na na FTMS01000042.1 = NZ_FTMS01000042.1 Primary Assembly 4434 na FTMS01000043.1 unplaced-scaffold na na FTMS01000043.1 = NZ_FTMS01000043.1 Primary Assembly 4011 na FTMS01000044.1 unplaced-scaffold na na FTMS01000044.1 = NZ_FTMS01000044.1 Primary Assembly 3599 na FTMS01000045.1 unplaced-scaffold na na FTMS01000045.1 = NZ_FTMS01000045.1 Primary Assembly 3434 na FTMS01000046.1 unplaced-scaffold na na FTMS01000046.1 = NZ_FTMS01000046.1 Primary Assembly 3037 na FTMS01000047.1 unplaced-scaffold na na FTMS01000047.1 = NZ_FTMS01000047.1 Primary Assembly 2669 na FTMS01000048.1 unplaced-scaffold na na FTMS01000048.1 = NZ_FTMS01000048.1 Primary Assembly 2491 na FTMS01000049.1 unplaced-scaffold na na FTMS01000049.1 = NZ_FTMS01000049.1 Primary Assembly 2377 na FTMS01000050.1 unplaced-scaffold na na FTMS01000050.1 = NZ_FTMS01000050.1 Primary Assembly 2264 na FTMS01000051.1 unplaced-scaffold na na FTMS01000051.1 = NZ_FTMS01000051.1 Primary Assembly 2193 na FTMS01000052.1 unplaced-scaffold na na FTMS01000052.1 = NZ_FTMS01000052.1 Primary Assembly 2114 na FTMS01000053.1 unplaced-scaffold na na FTMS01000053.1 = NZ_FTMS01000053.1 Primary Assembly 1943 na FTMS01000054.1 unplaced-scaffold na na FTMS01000054.1 = NZ_FTMS01000054.1 Primary Assembly 1884 na FTMS01000055.1 unplaced-scaffold na na FTMS01000055.1 = NZ_FTMS01000055.1 Primary Assembly 1572 na FTMS01000056.1 unplaced-scaffold na na FTMS01000056.1 = NZ_FTMS01000056.1 Primary Assembly 1300 na FTMS01000057.1 unplaced-scaffold na na FTMS01000057.1 = NZ_FTMS01000057.1 Primary Assembly 1289 na FTMS01000058.1 unplaced-scaffold na na FTMS01000058.1 = NZ_FTMS01000058.1 Primary Assembly 1160 na FTMS01000059.1 unplaced-scaffold na na FTMS01000059.1 = NZ_FTMS01000059.1 Primary Assembly 1150 na FTMS01000060.1 unplaced-scaffold na na FTMS01000060.1 = NZ_FTMS01000060.1 Primary Assembly 1128 na FTMS01000061.1 unplaced-scaffold na na FTMS01000061.1 = NZ_FTMS01000061.1 Primary Assembly 1116 na FTMS01000062.1 unplaced-scaffold na na FTMS01000062.1 = NZ_FTMS01000062.1 Primary Assembly 1116 na FTMS01000063.1 unplaced-scaffold na na FTMS01000063.1 = NZ_FTMS01000063.1 Primary Assembly 1112 na FTMS01000064.1 unplaced-scaffold na na FTMS01000064.1 = NZ_FTMS01000064.1 Primary Assembly 1076 na FTMS01000065.1 unplaced-scaffold na na FTMS01000065.1 = NZ_FTMS01000065.1 Primary Assembly 1023 na