# Assembly name: IMG-taxon 2582581319 annotated assembly # Organism name: Treponema berlinense (spirochetes) # Infraspecific name: strain=ATCC BAA-909 # Taxid: 225004 # BioSample: SAMN02745152 # BioProject: PRJEB19547 # Submitter: DOE - JOINT GENOME INSTITUTE # Date: 2017-03-04 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: FUXC01 # Assembly method: vpAllpaths v. r46652 # Genome coverage: 361x # Sequencing technology: Illumina HiSeq 2000,Illumina HiSeq 2500 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900167025.1 # RefSeq assembly accession: GCF_900167025.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900167024.1 GCF_900167024.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name FUXC01000001.1 unplaced-scaffold na na FUXC01000001.1 = NZ_FUXC01000001.1 Primary Assembly 422927 na FUXC01000002.1 unplaced-scaffold na na FUXC01000002.1 = NZ_FUXC01000002.1 Primary Assembly 359593 na FUXC01000003.1 unplaced-scaffold na na FUXC01000003.1 = NZ_FUXC01000003.1 Primary Assembly 197874 na FUXC01000004.1 unplaced-scaffold na na FUXC01000004.1 = NZ_FUXC01000004.1 Primary Assembly 193761 na FUXC01000005.1 unplaced-scaffold na na FUXC01000005.1 = NZ_FUXC01000005.1 Primary Assembly 162519 na FUXC01000006.1 unplaced-scaffold na na FUXC01000006.1 = NZ_FUXC01000006.1 Primary Assembly 161585 na FUXC01000007.1 unplaced-scaffold na na FUXC01000007.1 = NZ_FUXC01000007.1 Primary Assembly 133967 na FUXC01000008.1 unplaced-scaffold na na FUXC01000008.1 = NZ_FUXC01000008.1 Primary Assembly 129744 na FUXC01000009.1 unplaced-scaffold na na FUXC01000009.1 = NZ_FUXC01000009.1 Primary Assembly 117415 na FUXC01000010.1 unplaced-scaffold na na FUXC01000010.1 = NZ_FUXC01000010.1 Primary Assembly 113975 na FUXC01000011.1 unplaced-scaffold na na FUXC01000011.1 = NZ_FUXC01000011.1 Primary Assembly 103551 na FUXC01000012.1 unplaced-scaffold na na FUXC01000012.1 = NZ_FUXC01000012.1 Primary Assembly 101061 na FUXC01000013.1 unplaced-scaffold na na FUXC01000013.1 = NZ_FUXC01000013.1 Primary Assembly 67019 na FUXC01000014.1 unplaced-scaffold na na FUXC01000014.1 = NZ_FUXC01000014.1 Primary Assembly 62520 na FUXC01000015.1 unplaced-scaffold na na FUXC01000015.1 = NZ_FUXC01000015.1 Primary Assembly 39492 na FUXC01000016.1 unplaced-scaffold na na FUXC01000016.1 = NZ_FUXC01000016.1 Primary Assembly 26963 na FUXC01000017.1 unplaced-scaffold na na FUXC01000017.1 = NZ_FUXC01000017.1 Primary Assembly 24721 na FUXC01000018.1 unplaced-scaffold na na FUXC01000018.1 = NZ_FUXC01000018.1 Primary Assembly 16376 na FUXC01000019.1 unplaced-scaffold na na FUXC01000019.1 = NZ_FUXC01000019.1 Primary Assembly 15171 na FUXC01000020.1 unplaced-scaffold na na FUXC01000020.1 = NZ_FUXC01000020.1 Primary Assembly 11173 na FUXC01000021.1 unplaced-scaffold na na FUXC01000021.1 = NZ_FUXC01000021.1 Primary Assembly 9944 na FUXC01000022.1 unplaced-scaffold na na FUXC01000022.1 = NZ_FUXC01000022.1 Primary Assembly 9943 na FUXC01000023.1 unplaced-scaffold na na FUXC01000023.1 = NZ_FUXC01000023.1 Primary Assembly 8769 na FUXC01000024.1 unplaced-scaffold na na FUXC01000024.1 = NZ_FUXC01000024.1 Primary Assembly 7053 na FUXC01000025.1 unplaced-scaffold na na FUXC01000025.1 = NZ_FUXC01000025.1 Primary Assembly 5901 na FUXC01000026.1 unplaced-scaffold na na FUXC01000026.1 = NZ_FUXC01000026.1 Primary Assembly 3024 na FUXC01000027.1 unplaced-scaffold na na FUXC01000027.1 = NZ_FUXC01000027.1 Primary Assembly 2893 na FUXC01000028.1 unplaced-scaffold na na FUXC01000028.1 = NZ_FUXC01000028.1 Primary Assembly 2589 na FUXC01000029.1 unplaced-scaffold na na FUXC01000029.1 = NZ_FUXC01000029.1 Primary Assembly 2541 na FUXC01000030.1 unplaced-scaffold na na FUXC01000030.1 = NZ_FUXC01000030.1 Primary Assembly 2443 na FUXC01000031.1 unplaced-scaffold na na FUXC01000031.1 = NZ_FUXC01000031.1 Primary Assembly 1598 na FUXC01000032.1 unplaced-scaffold na na FUXC01000032.1 = NZ_FUXC01000032.1 Primary Assembly 1538 na FUXC01000033.1 unplaced-scaffold na na FUXC01000033.1 = NZ_FUXC01000033.1 Primary Assembly 1389 na