# Assembly name: IMG-taxon 2582581326 annotated assembly # Organism name: Treponema porcinum (spirochetes) # Infraspecific name: strain=ATCC BAA-908 # Taxid: 261392 # BioSample: SAMN02745149 # BioProject: PRJEB19554 # Submitter: DOE - JOINT GENOME INSTITUTE # Date: 2017-03-04 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: FUWG01 # Assembly method: vpAllpaths v. r46652 # Genome coverage: 427x # Sequencing technology: Illumina HiSeq 2000,Illumina HiSeq 2500 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900167145.1 # RefSeq assembly accession: GCF_900167145.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900167144.1 GCF_900167144.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name FUWG01000001.1 unplaced-scaffold na na FUWG01000001.1 = NZ_FUWG01000001.1 Primary Assembly 1042 na FUWG01000002.1 unplaced-scaffold na na FUWG01000002.1 = NZ_FUWG01000002.1 Primary Assembly 397556 na FUWG01000003.1 unplaced-scaffold na na FUWG01000003.1 = NZ_FUWG01000003.1 Primary Assembly 284710 na FUWG01000004.1 unplaced-scaffold na na FUWG01000004.1 = NZ_FUWG01000004.1 Primary Assembly 205038 na FUWG01000005.1 unplaced-scaffold na na FUWG01000005.1 = NZ_FUWG01000005.1 Primary Assembly 147235 na FUWG01000006.1 unplaced-scaffold na na FUWG01000006.1 = NZ_FUWG01000006.1 Primary Assembly 144243 na FUWG01000007.1 unplaced-scaffold na na FUWG01000007.1 = NZ_FUWG01000007.1 Primary Assembly 140822 na FUWG01000008.1 unplaced-scaffold na na FUWG01000008.1 = NZ_FUWG01000008.1 Primary Assembly 138004 na FUWG01000009.1 unplaced-scaffold na na FUWG01000009.1 = NZ_FUWG01000009.1 Primary Assembly 127932 na FUWG01000010.1 unplaced-scaffold na na FUWG01000010.1 = NZ_FUWG01000010.1 Primary Assembly 121302 na FUWG01000011.1 unplaced-scaffold na na FUWG01000011.1 = NZ_FUWG01000011.1 Primary Assembly 112868 na FUWG01000012.1 unplaced-scaffold na na FUWG01000012.1 = NZ_FUWG01000012.1 Primary Assembly 105792 na FUWG01000013.1 unplaced-scaffold na na FUWG01000013.1 = NZ_FUWG01000013.1 Primary Assembly 101601 na FUWG01000014.1 unplaced-scaffold na na FUWG01000014.1 = NZ_FUWG01000014.1 Primary Assembly 94997 na FUWG01000015.1 unplaced-scaffold na na FUWG01000015.1 = NZ_FUWG01000015.1 Primary Assembly 82552 na FUWG01000016.1 unplaced-scaffold na na FUWG01000016.1 = NZ_FUWG01000016.1 Primary Assembly 77190 na FUWG01000017.1 unplaced-scaffold na na FUWG01000017.1 = NZ_FUWG01000017.1 Primary Assembly 73044 na FUWG01000018.1 unplaced-scaffold na na FUWG01000018.1 = NZ_FUWG01000018.1 Primary Assembly 53218 na FUWG01000019.1 unplaced-scaffold na na FUWG01000019.1 = NZ_FUWG01000019.1 Primary Assembly 24146 na FUWG01000020.1 unplaced-scaffold na na FUWG01000020.1 = NZ_FUWG01000020.1 Primary Assembly 16579 na FUWG01000021.1 unplaced-scaffold na na FUWG01000021.1 = NZ_FUWG01000021.1 Primary Assembly 12879 na FUWG01000022.1 unplaced-scaffold na na FUWG01000022.1 = NZ_FUWG01000022.1 Primary Assembly 11116 na FUWG01000023.1 unplaced-scaffold na na FUWG01000023.1 = NZ_FUWG01000023.1 Primary Assembly 8144 na FUWG01000024.1 unplaced-scaffold na na FUWG01000024.1 = NZ_FUWG01000024.1 Primary Assembly 6362 na FUWG01000025.1 unplaced-scaffold na na FUWG01000025.1 = NZ_FUWG01000025.1 Primary Assembly 4740 na FUWG01000026.1 unplaced-scaffold na na FUWG01000026.1 = NZ_FUWG01000026.1 Primary Assembly 4697 na FUWG01000027.1 unplaced-scaffold na na FUWG01000027.1 = NZ_FUWG01000027.1 Primary Assembly 2397 na FUWG01000028.1 unplaced-scaffold na na FUWG01000028.1 = NZ_FUWG01000028.1 Primary Assembly 1909 na FUWG01000029.1 unplaced-scaffold na na FUWG01000029.1 = NZ_FUWG01000029.1 Primary Assembly 1665 na FUWG01000030.1 unplaced-scaffold na na FUWG01000030.1 = NZ_FUWG01000030.1 Primary Assembly 1499 na FUWG01000031.1 unplaced-scaffold na na FUWG01000031.1 = NZ_FUWG01000031.1 Primary Assembly 1300 na FUWG01000032.1 unplaced-scaffold na na FUWG01000032.1 = NZ_FUWG01000032.1 Primary Assembly 1230 na