# Assembly name: IMG-taxon 2740891836 annotated assembly # Organism name: Rhodopseudomonas pentothenatexigens (a-proteobacteria) # Infraspecific name: strain=JA575 # Taxid: 999699 # BioSample: SAMN05892882 # BioProject: PRJEB22300 # Submitter: DOE - JOINT GENOME INSTITUTE # Date: 2018-07-17 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: UFQQ01 # Assembly method: spades v. 3.10.1 # Genome coverage: 189x # Sequencing technology: Illumina HiSeq 2500-1TB # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_900218015.1 # RefSeq assembly accession: GCF_900218015.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900218014.1 GCF_900218014.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name UFQQ01000001.1 unplaced-scaffold na na UFQQ01000001.1 = NZ_UFQQ01000001.1 Primary Assembly 322676 na UFQQ01000002.1 unplaced-scaffold na na UFQQ01000002.1 = NZ_UFQQ01000002.1 Primary Assembly 318551 na UFQQ01000003.1 unplaced-scaffold na na UFQQ01000003.1 = NZ_UFQQ01000003.1 Primary Assembly 275285 na UFQQ01000004.1 unplaced-scaffold na na UFQQ01000004.1 = NZ_UFQQ01000004.1 Primary Assembly 262083 na UFQQ01000005.1 unplaced-scaffold na na UFQQ01000005.1 = NZ_UFQQ01000005.1 Primary Assembly 261597 na UFQQ01000006.1 unplaced-scaffold na na UFQQ01000006.1 = NZ_UFQQ01000006.1 Primary Assembly 246810 na UFQQ01000007.1 unplaced-scaffold na na UFQQ01000007.1 = NZ_UFQQ01000007.1 Primary Assembly 245106 na UFQQ01000008.1 unplaced-scaffold na na UFQQ01000008.1 = NZ_UFQQ01000008.1 Primary Assembly 228840 na UFQQ01000009.1 unplaced-scaffold na na UFQQ01000009.1 = NZ_UFQQ01000009.1 Primary Assembly 214398 na UFQQ01000010.1 unplaced-scaffold na na UFQQ01000010.1 = NZ_UFQQ01000010.1 Primary Assembly 212810 na UFQQ01000011.1 unplaced-scaffold na na UFQQ01000011.1 = NZ_UFQQ01000011.1 Primary Assembly 194650 na UFQQ01000012.1 unplaced-scaffold na na UFQQ01000012.1 = NZ_UFQQ01000012.1 Primary Assembly 184715 na UFQQ01000013.1 unplaced-scaffold na na UFQQ01000013.1 = NZ_UFQQ01000013.1 Primary Assembly 169380 na UFQQ01000014.1 unplaced-scaffold na na UFQQ01000014.1 = NZ_UFQQ01000014.1 Primary Assembly 155125 na UFQQ01000015.1 unplaced-scaffold na na UFQQ01000015.1 = NZ_UFQQ01000015.1 Primary Assembly 148480 na UFQQ01000016.1 unplaced-scaffold na na UFQQ01000016.1 = NZ_UFQQ01000016.1 Primary Assembly 121102 na UFQQ01000017.1 unplaced-scaffold na na UFQQ01000017.1 = NZ_UFQQ01000017.1 Primary Assembly 109778 na UFQQ01000018.1 unplaced-scaffold na na UFQQ01000018.1 = NZ_UFQQ01000018.1 Primary Assembly 92330 na UFQQ01000019.1 unplaced-scaffold na na UFQQ01000019.1 = NZ_UFQQ01000019.1 Primary Assembly 90726 na UFQQ01000020.1 unplaced-scaffold na na UFQQ01000020.1 = NZ_UFQQ01000020.1 Primary Assembly 89653 na UFQQ01000021.1 unplaced-scaffold na na UFQQ01000021.1 = NZ_UFQQ01000021.1 Primary Assembly 87503 na UFQQ01000022.1 unplaced-scaffold na na UFQQ01000022.1 = NZ_UFQQ01000022.1 Primary Assembly 84590 na UFQQ01000023.1 unplaced-scaffold na na UFQQ01000023.1 = NZ_UFQQ01000023.1 Primary Assembly 83794 na UFQQ01000024.1 unplaced-scaffold na na UFQQ01000024.1 = NZ_UFQQ01000024.1 Primary Assembly 74665 na UFQQ01000025.1 unplaced-scaffold na na UFQQ01000025.1 = NZ_UFQQ01000025.1 Primary Assembly 69839 na UFQQ01000026.1 unplaced-scaffold na na UFQQ01000026.1 = NZ_UFQQ01000026.1 Primary Assembly 69366 na UFQQ01000027.1 unplaced-scaffold na na UFQQ01000027.1 = NZ_UFQQ01000027.1 Primary Assembly 61440 na UFQQ01000028.1 unplaced-scaffold na na UFQQ01000028.1 = NZ_UFQQ01000028.1 Primary Assembly 60778 na UFQQ01000029.1 unplaced-scaffold na na UFQQ01000029.1 = NZ_UFQQ01000029.1 Primary Assembly 60364 na UFQQ01000030.1 unplaced-scaffold na na UFQQ01000030.1 = NZ_UFQQ01000030.1 Primary Assembly 51046 na UFQQ01000031.1 unplaced-scaffold na na UFQQ01000031.1 = NZ_UFQQ01000031.1 Primary Assembly 50834 na UFQQ01000032.1 unplaced-scaffold na na UFQQ01000032.1 = NZ_UFQQ01000032.1 Primary Assembly 49936 na UFQQ01000033.1 unplaced-scaffold na na UFQQ01000033.1 = NZ_UFQQ01000033.1 Primary Assembly 48163 na UFQQ01000034.1 unplaced-scaffold na na UFQQ01000034.1 = NZ_UFQQ01000034.1 Primary Assembly 44406 na UFQQ01000035.1 unplaced-scaffold na na UFQQ01000035.1 = NZ_UFQQ01000035.1 Primary Assembly 43698 na UFQQ01000036.1 unplaced-scaffold na na UFQQ01000036.1 = NZ_UFQQ01000036.1 Primary Assembly 40767 na UFQQ01000037.1 unplaced-scaffold na na UFQQ01000037.1 = NZ_UFQQ01000037.1 Primary Assembly 39419 na UFQQ01000038.1 unplaced-scaffold na na UFQQ01000038.1 = NZ_UFQQ01000038.1 Primary Assembly 36879 na UFQQ01000039.1 unplaced-scaffold na na UFQQ01000039.1 = NZ_UFQQ01000039.1 Primary Assembly 33659 na UFQQ01000040.1 unplaced-scaffold na na UFQQ01000040.1 = NZ_UFQQ01000040.1 Primary Assembly 33337 na UFQQ01000041.1 unplaced-scaffold na na UFQQ01000041.1 = NZ_UFQQ01000041.1 Primary Assembly 28174 na UFQQ01000042.1 unplaced-scaffold na na UFQQ01000042.1 = NZ_UFQQ01000042.1 Primary Assembly 27902 na UFQQ01000043.1 unplaced-scaffold na na UFQQ01000043.1 = NZ_UFQQ01000043.1 Primary Assembly 27237 na UFQQ01000044.1 unplaced-scaffold na na UFQQ01000044.1 = NZ_UFQQ01000044.1 Primary Assembly 26073 na UFQQ01000045.1 unplaced-scaffold na na UFQQ01000045.1 = NZ_UFQQ01000045.1 Primary Assembly 25500 na UFQQ01000046.1 unplaced-scaffold na na UFQQ01000046.1 = NZ_UFQQ01000046.1 Primary Assembly 24822 na UFQQ01000047.1 unplaced-scaffold na na UFQQ01000047.1 = NZ_UFQQ01000047.1 Primary Assembly 21580 na UFQQ01000048.1 unplaced-scaffold na na UFQQ01000048.1 = NZ_UFQQ01000048.1 Primary Assembly 20656 na UFQQ01000049.1 unplaced-scaffold na na UFQQ01000049.1 = NZ_UFQQ01000049.1 Primary Assembly 14467 na UFQQ01000050.1 unplaced-scaffold na na UFQQ01000050.1 = NZ_UFQQ01000050.1 Primary Assembly 13301 na UFQQ01000051.1 unplaced-scaffold na na UFQQ01000051.1 = NZ_UFQQ01000051.1 Primary Assembly 12911 na UFQQ01000052.1 unplaced-scaffold na na UFQQ01000052.1 = NZ_UFQQ01000052.1 Primary Assembly 11806 na UFQQ01000053.1 unplaced-scaffold na na UFQQ01000053.1 = NZ_UFQQ01000053.1 Primary Assembly 11005 na UFQQ01000054.1 unplaced-scaffold na na UFQQ01000054.1 = NZ_UFQQ01000054.1 Primary Assembly 8419 na UFQQ01000055.1 unplaced-scaffold na na UFQQ01000055.1 = NZ_UFQQ01000055.1 Primary Assembly 5626 na UFQQ01000056.1 unplaced-scaffold na na UFQQ01000056.1 = NZ_UFQQ01000056.1 Primary Assembly 5073 na UFQQ01000057.1 unplaced-scaffold na na UFQQ01000057.1 = NZ_UFQQ01000057.1 Primary Assembly 4929 na UFQQ01000058.1 unplaced-scaffold na na UFQQ01000058.1 = NZ_UFQQ01000058.1 Primary Assembly 4538 na UFQQ01000059.1 unplaced-scaffold na na UFQQ01000059.1 = NZ_UFQQ01000059.1 Primary Assembly 3848 na UFQQ01000060.1 unplaced-scaffold na na UFQQ01000060.1 = NZ_UFQQ01000060.1 Primary Assembly 3241 na UFQQ01000061.1 unplaced-scaffold na na UFQQ01000061.1 = NZ_UFQQ01000061.1 Primary Assembly 2474 na UFQQ01000062.1 unplaced-scaffold na na UFQQ01000062.1 = NZ_UFQQ01000062.1 Primary Assembly 2373 na UFQQ01000063.1 unplaced-scaffold na na UFQQ01000063.1 = NZ_UFQQ01000063.1 Primary Assembly 1495 na UFQQ01000064.1 unplaced-scaffold na na UFQQ01000064.1 = NZ_UFQQ01000064.1 Primary Assembly 1445 na UFQQ01000065.1 unplaced-scaffold na na UFQQ01000065.1 = NZ_UFQQ01000065.1 Primary Assembly 1328 na UFQQ01000066.1 unplaced-scaffold na na UFQQ01000066.1 = NZ_UFQQ01000066.1 Primary Assembly 1321 na UFQQ01000067.1 unplaced-scaffold na na UFQQ01000067.1 = NZ_UFQQ01000067.1 Primary Assembly 1140 na UFQQ01000068.1 unplaced-scaffold na na UFQQ01000068.1 = NZ_UFQQ01000068.1 Primary Assembly 1081 na UFQQ01000069.1 unplaced-scaffold na na UFQQ01000069.1 = NZ_UFQQ01000069.1 Primary Assembly 1018 na