# Assembly name: fSpaAur1.1 # Organism name: Sparus aurata (gilthead seabream) # Taxid: 8175 # BioSample: SAMEA104384835 # BioProject: PRJEB31901 # Submitter: SC # Date: 2019-07-30 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAAHFC01 # Genome coverage: 56x # RefSeq category: Representative Genome # GenBank assembly accession: GCA_900880675.1 # RefSeq assembly accession: GCF_900880675.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_900880695.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_900880674.1 GCF_900880674.1 Primary Assembly ## GCF_007826765.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Super_scaffold_1 assembled-molecule 1 Chromosome LR537121.1 = NC_044187.1 Primary Assembly 41035582 na Super_scaffold_13 assembled-molecule 2 Chromosome LR537122.1 = NC_044188.1 Primary Assembly 36133474 na Super_scaffold_11 assembled-molecule 3 Chromosome LR537123.1 = NC_044189.1 Primary Assembly 32888385 na Super_scaffold_3 assembled-molecule 4 Chromosome LR537124.1 = NC_044190.1 Primary Assembly 41392777 na Super_scaffold_9 assembled-molecule 5 Chromosome LR537125.1 = NC_044191.1 Primary Assembly 38249111 na Super_scaffold_5 assembled-molecule 6 Chromosome LR537126.1 = NC_044192.1 Primary Assembly 40124345 na Super_scaffold_7 assembled-molecule 7 Chromosome LR537127.1 = NC_044193.1 Primary Assembly 35997798 na Super_scaffold_6 assembled-molecule 8 Chromosome LR537128.1 = NC_044194.1 Primary Assembly 36959192 na Super_scaffold_21 assembled-molecule 9 Chromosome LR537129.1 = NC_044195.1 Primary Assembly 37012328 na Super_scaffold_18 assembled-molecule 10 Chromosome LR537130.1 = NC_044196.1 Primary Assembly 35512760 na Super_scaffold_4 assembled-molecule 11 Chromosome LR537131.1 = NC_044197.1 Primary Assembly 35380617 na Super_scaffold_12 assembled-molecule 12 Chromosome LR537132.1 = NC_044198.1 Primary Assembly 30193437 na Super_scaffold_14 assembled-molecule 13 Chromosome LR537133.1 = NC_044199.1 Primary Assembly 35791275 na Super_scaffold_23 assembled-molecule 14 Chromosome LR537134.1 = NC_044200.1 Primary Assembly 25861820 na Super_scaffold_15 assembled-molecule 15 Chromosome LR537135.1 = NC_044201.1 Primary Assembly 31859785 na Super_scaffold_22 assembled-molecule 16 Chromosome LR537136.1 = NC_044202.1 Primary Assembly 30078578 na Super_scaffold_16 assembled-molecule 17 Chromosome LR537137.1 = NC_044203.1 Primary Assembly 37948182 na Super_scaffold_10 assembled-molecule 18 Chromosome LR537138.1 = NC_044204.1 Primary Assembly 37104330 na Super_scaffold_20 assembled-molecule 19 Chromosome LR537139.1 = NC_044205.1 Primary Assembly 31047742 na Super_scaffold_19 assembled-molecule 20 Chromosome LR537140.1 = NC_044206.1 Primary Assembly 28386240 na Super_scaffold_17 assembled-molecule 21 Chromosome LR537141.1 = NC_044207.1 Primary Assembly 35160130 na Super_scaffold_24 assembled-molecule 22 Chromosome LR537142.1 = NC_044208.1 Primary Assembly 31425404 na Super_scaffold_8 assembled-molecule 23 Chromosome LR537143.1 = NC_044209.1 Primary Assembly 30526999 na Super_scaffold_2 assembled-molecule 24 Chromosome LR537144.1 = NC_044210.1 Primary Assembly 22435136 na contig1 unplaced-scaffold na na CAAHFC010000001.1 = NW_022045100.1 Primary Assembly 423250 na contig2 unplaced-scaffold na na CAAHFC010000002.1 = NW_022045101.1 Primary Assembly 417322 na contig3 unplaced-scaffold na na CAAHFC010000003.1 = NW_022045102.1 Primary Assembly 392191 na contig4 unplaced-scaffold na na CAAHFC010000004.1 = NW_022045103.1 Primary Assembly 366039 na contig5 unplaced-scaffold na na CAAHFC010000005.1 = NW_022045104.1 Primary Assembly 343555 na contig6 unplaced-scaffold na na CAAHFC010000006.1 = NW_022045105.1 Primary Assembly 317248 na contig7 unplaced-scaffold na na CAAHFC010000007.1 = NW_022045106.1 Primary Assembly 317227 na contig8 unplaced-scaffold na na CAAHFC010000008.1 = NW_022045107.1 Primary Assembly 310298 na contig9 unplaced-scaffold na na CAAHFC010000009.1 = NW_022045108.1 Primary Assembly 301216 na contig10 unplaced-scaffold na na CAAHFC010000010.1 = NW_022045109.1 Primary Assembly 298920 na contig11 unplaced-scaffold na na CAAHFC010000011.1 = NW_022045110.1 Primary Assembly 276901 na contig12 unplaced-scaffold na na CAAHFC010000012.1 = NW_022045111.1 Primary Assembly 262853 na contig13 unplaced-scaffold na na CAAHFC010000013.1 = NW_022045112.1 Primary Assembly 260828 na contig14 unplaced-scaffold na na CAAHFC010000014.1 = NW_022045113.1 Primary Assembly 233782 na contig15 unplaced-scaffold na na CAAHFC010000015.1 = NW_022045114.1 Primary Assembly 232415 na contig16 unplaced-scaffold na na CAAHFC010000016.1 = NW_022045115.1 Primary Assembly 218624 na contig17 unplaced-scaffold na na CAAHFC010000017.1 = NW_022045116.1 Primary Assembly 216807 na contig18 unplaced-scaffold na na CAAHFC010000018.1 = NW_022045117.1 Primary Assembly 193988 na contig19 unplaced-scaffold na na CAAHFC010000019.1 = NW_022045118.1 Primary Assembly 190138 na contig20 unplaced-scaffold na na CAAHFC010000020.1 = NW_022045119.1 Primary Assembly 189718 na contig21 unplaced-scaffold na na CAAHFC010000021.1 = NW_022045120.1 Primary Assembly 177197 na contig22 unplaced-scaffold na na CAAHFC010000022.1 = NW_022045121.1 Primary Assembly 177120 na contig23 unplaced-scaffold na na CAAHFC010000023.1 = NW_022045122.1 Primary Assembly 173598 na contig24 unplaced-scaffold na na CAAHFC010000024.1 = NW_022045123.1 Primary Assembly 163330 na contig25 unplaced-scaffold na na CAAHFC010000025.1 = NW_022045124.1 Primary Assembly 160859 na contig26 unplaced-scaffold na na CAAHFC010000026.1 = NW_022045125.1 Primary Assembly 158698 na contig27 unplaced-scaffold na na CAAHFC010000027.1 = NW_022045126.1 Primary Assembly 157380 na contig28 unplaced-scaffold na na CAAHFC010000028.1 = NW_022045127.1 Primary Assembly 147298 na contig29 unplaced-scaffold na na CAAHFC010000029.1 = NW_022045128.1 Primary Assembly 141590 na contig30 unplaced-scaffold na na CAAHFC010000030.1 = NW_022045129.1 Primary Assembly 138454 na contig31 unplaced-scaffold na na CAAHFC010000031.1 = NW_022045130.1 Primary Assembly 137540 na contig32 unplaced-scaffold na na CAAHFC010000032.1 = NW_022045131.1 Primary Assembly 132279 na contig33 unplaced-scaffold na na CAAHFC010000033.1 = NW_022045132.1 Primary Assembly 131620 na contig34 unplaced-scaffold na na CAAHFC010000034.1 = NW_022045133.1 Primary Assembly 128841 na contig35 unplaced-scaffold na na CAAHFC010000035.1 = NW_022045134.1 Primary Assembly 127140 na contig36 unplaced-scaffold na na CAAHFC010000036.1 = NW_022045135.1 Primary Assembly 126783 na contig37 unplaced-scaffold na na CAAHFC010000037.1 = NW_022045136.1 Primary Assembly 123694 na contig38 unplaced-scaffold na na CAAHFC010000038.1 = NW_022045137.1 Primary Assembly 122180 na contig39 unplaced-scaffold na na CAAHFC010000039.1 = NW_022045138.1 Primary Assembly 121153 na contig40 unplaced-scaffold na na CAAHFC010000040.1 = NW_022045139.1 Primary Assembly 121314 na contig41 unplaced-scaffold na na CAAHFC010000041.1 = NW_022045140.1 Primary Assembly 119712 na contig42 unplaced-scaffold na na CAAHFC010000042.1 = NW_022045141.1 Primary Assembly 119376 na contig43 unplaced-scaffold na na CAAHFC010000043.1 = NW_022045142.1 Primary Assembly 119061 na contig44 unplaced-scaffold na na CAAHFC010000044.1 = NW_022045143.1 Primary Assembly 117604 na contig45 unplaced-scaffold na na CAAHFC010000045.1 = NW_022045144.1 Primary Assembly 116722 na contig46 unplaced-scaffold na na CAAHFC010000046.1 = NW_022045145.1 Primary Assembly 116212 na contig47 unplaced-scaffold na na CAAHFC010000047.1 = NW_022045146.1 Primary Assembly 113463 na contig48 unplaced-scaffold na na CAAHFC010000048.1 = NW_022045147.1 Primary Assembly 113443 na contig49 unplaced-scaffold na na CAAHFC010000049.1 = NW_022045148.1 Primary Assembly 108829 na contig50 unplaced-scaffold na na CAAHFC010000050.1 = NW_022045149.1 Primary Assembly 108896 na contig51 unplaced-scaffold na na CAAHFC010000051.1 = NW_022045150.1 Primary Assembly 107150 na contig52 unplaced-scaffold na na CAAHFC010000052.1 = NW_022045151.1 Primary Assembly 104158 na contig53 unplaced-scaffold na na CAAHFC010000053.1 = NW_022045152.1 Primary Assembly 102518 na contig54 unplaced-scaffold na na CAAHFC010000054.1 = NW_022045153.1 Primary Assembly 94759 na contig55 unplaced-scaffold na na CAAHFC010000055.1 = NW_022045154.1 Primary Assembly 93944 na contig56 unplaced-scaffold na na CAAHFC010000056.1 = NW_022045155.1 Primary Assembly 93050 na contig57 unplaced-scaffold na na CAAHFC010000057.1 = NW_022045156.1 Primary Assembly 91954 na contig58 unplaced-scaffold na na CAAHFC010000058.1 = NW_022045157.1 Primary Assembly 83876 na contig59 unplaced-scaffold na na CAAHFC010000059.1 = NW_022045158.1 Primary Assembly 82649 na contig60 unplaced-scaffold na na CAAHFC010000060.1 = NW_022045159.1 Primary Assembly 80752 na contig61 unplaced-scaffold na na CAAHFC010000061.1 = NW_022045160.1 Primary Assembly 78132 na contig62 unplaced-scaffold na na CAAHFC010000062.1 = NW_022045161.1 Primary Assembly 78172 na contig63 unplaced-scaffold na na CAAHFC010000063.1 = NW_022045162.1 Primary Assembly 75833 na contig64 unplaced-scaffold na na CAAHFC010000064.1 = NW_022045163.1 Primary Assembly 74533 na contig65 unplaced-scaffold na na CAAHFC010000065.1 = NW_022045164.1 Primary Assembly 68917 na contig66 unplaced-scaffold na na CAAHFC010000066.1 = NW_022045165.1 Primary Assembly 67553 na contig67 unplaced-scaffold na na CAAHFC010000067.1 = NW_022045166.1 Primary Assembly 66278 na contig68 unplaced-scaffold na na CAAHFC010000068.1 = NW_022045167.1 Primary Assembly 64670 na contig69 unplaced-scaffold na na CAAHFC010000069.1 = NW_022045168.1 Primary Assembly 62739 na contig70 unplaced-scaffold na na CAAHFC010000070.1 = NW_022045169.1 Primary Assembly 60726 na contig71 unplaced-scaffold na na CAAHFC010000071.1 = NW_022045170.1 Primary Assembly 60705 na contig72 unplaced-scaffold na na CAAHFC010000072.1 = NW_022045171.1 Primary Assembly 58424 na contig73 unplaced-scaffold na na CAAHFC010000073.1 = NW_022045172.1 Primary Assembly 58234 na contig74 unplaced-scaffold na na CAAHFC010000074.1 = NW_022045173.1 Primary Assembly 52844 na contig75 unplaced-scaffold na na CAAHFC010000075.1 = NW_022045174.1 Primary Assembly 50719 na contig76 unplaced-scaffold na na CAAHFC010000076.1 = NW_022045175.1 Primary Assembly 50706 na contig77 unplaced-scaffold na na CAAHFC010000077.1 = NW_022045176.1 Primary Assembly 50407 na contig78 unplaced-scaffold na na CAAHFC010000078.1 = NW_022045177.1 Primary Assembly 48720 na contig79 unplaced-scaffold na na CAAHFC010000079.1 = NW_022045178.1 Primary Assembly 47831 na contig80 unplaced-scaffold na na CAAHFC010000080.1 = NW_022045179.1 Primary Assembly 47122 na contig81 unplaced-scaffold na na CAAHFC010000081.1 = NW_022045180.1 Primary Assembly 46728 na contig82 unplaced-scaffold na na CAAHFC010000082.1 = NW_022045181.1 Primary Assembly 45624 na contig83 unplaced-scaffold na na CAAHFC010000083.1 = NW_022045182.1 Primary Assembly 44143 na contig84 unplaced-scaffold na na CAAHFC010000084.1 = NW_022045183.1 Primary Assembly 43087 na contig85 unplaced-scaffold na na CAAHFC010000085.1 = NW_022045184.1 Primary Assembly 41546 na contig86 unplaced-scaffold na na CAAHFC010000086.1 = NW_022045185.1 Primary Assembly 41387 na contig87 unplaced-scaffold na na CAAHFC010000087.1 = NW_022045186.1 Primary Assembly 40994 na contig88 unplaced-scaffold na na CAAHFC010000088.1 = NW_022045187.1 Primary Assembly 40787 na contig89 unplaced-scaffold na na CAAHFC010000089.1 = NW_022045188.1 Primary Assembly 40526 na contig90 unplaced-scaffold na na CAAHFC010000090.1 = NW_022045189.1 Primary Assembly 39651 na contig91 unplaced-scaffold na na CAAHFC010000091.1 = NW_022045190.1 Primary Assembly 39428 na contig92 unplaced-scaffold na na CAAHFC010000092.1 = NW_022045191.1 Primary Assembly 39477 na contig93 unplaced-scaffold na na CAAHFC010000093.1 = NW_022045192.1 Primary Assembly 39451 na contig94 unplaced-scaffold na na CAAHFC010000094.1 = NW_022045193.1 Primary Assembly 39088 na contig95 unplaced-scaffold na na CAAHFC010000095.1 = NW_022045194.1 Primary Assembly 38600 na contig96 unplaced-scaffold na na CAAHFC010000096.1 = NW_022045195.1 Primary Assembly 37769 na contig97 unplaced-scaffold na na CAAHFC010000097.1 = NW_022045196.1 Primary Assembly 37692 na contig98 unplaced-scaffold na na CAAHFC010000098.1 = NW_022045197.1 Primary Assembly 37517 na contig99 unplaced-scaffold na na CAAHFC010000099.1 = NW_022045198.1 Primary Assembly 37432 na contig100 unplaced-scaffold na na CAAHFC010000100.1 = NW_022045199.1 Primary Assembly 37242 na contig101 unplaced-scaffold na na CAAHFC010000101.1 = NW_022045200.1 Primary Assembly 36688 na contig102 unplaced-scaffold na na CAAHFC010000102.1 = NW_022045201.1 Primary Assembly 36352 na contig103 unplaced-scaffold na na CAAHFC010000103.1 = NW_022045202.1 Primary Assembly 36319 na contig104 unplaced-scaffold na na CAAHFC010000104.1 = NW_022045203.1 Primary Assembly 36106 na contig105 unplaced-scaffold na na CAAHFC010000105.1 = NW_022045204.1 Primary Assembly 36069 na contig106 unplaced-scaffold na na CAAHFC010000106.1 = NW_022045205.1 Primary Assembly 33685 na contig107 unplaced-scaffold na na CAAHFC010000107.1 = NW_022045206.1 Primary Assembly 33320 na contig108 unplaced-scaffold na na CAAHFC010000108.1 = NW_022045207.1 Primary Assembly 33103 na contig109 unplaced-scaffold na na CAAHFC010000109.1 = NW_022045208.1 Primary Assembly 33113 na contig110 unplaced-scaffold na na CAAHFC010000110.1 = NW_022045209.1 Primary Assembly 32114 na contig111 unplaced-scaffold na na CAAHFC010000111.1 = NW_022045210.1 Primary Assembly 31225 na contig112 unplaced-scaffold na na CAAHFC010000112.1 = NW_022045211.1 Primary Assembly 30581 na contig113 unplaced-scaffold na na CAAHFC010000113.1 = NW_022045212.1 Primary Assembly 30734 na contig114 unplaced-scaffold na na CAAHFC010000114.1 = NW_022045213.1 Primary Assembly 30737 na contig115 unplaced-scaffold na na CAAHFC010000115.1 = NW_022045214.1 Primary Assembly 30070 na contig116 unplaced-scaffold na na CAAHFC010000116.1 = NW_022045215.1 Primary Assembly 29948 na contig117 unplaced-scaffold na na CAAHFC010000117.1 = NW_022045216.1 Primary Assembly 29658 na contig118 unplaced-scaffold na na CAAHFC010000118.1 = NW_022045217.1 Primary Assembly 29289 na contig119 unplaced-scaffold na na CAAHFC010000119.1 = NW_022045218.1 Primary Assembly 28888 na contig120 unplaced-scaffold na na CAAHFC010000120.1 = NW_022045219.1 Primary Assembly 28644 na contig121 unplaced-scaffold na na CAAHFC010000121.1 = NW_022045220.1 Primary Assembly 28577 na contig122 unplaced-scaffold na na CAAHFC010000122.1 = NW_022045221.1 Primary Assembly 27983 na contig123 unplaced-scaffold na na CAAHFC010000123.1 = NW_022045222.1 Primary Assembly 28029 na contig124 unplaced-scaffold na na CAAHFC010000124.1 = NW_022045223.1 Primary Assembly 27618 na contig125 unplaced-scaffold na na CAAHFC010000125.1 = NW_022045224.1 Primary Assembly 27574 na contig126 unplaced-scaffold na na CAAHFC010000126.1 = NW_022045225.1 Primary Assembly 27285 na contig127 unplaced-scaffold na na CAAHFC010000127.1 = NW_022045226.1 Primary Assembly 26932 na contig128 unplaced-scaffold na na CAAHFC010000128.1 = NW_022045227.1 Primary Assembly 26914 na contig129 unplaced-scaffold na na CAAHFC010000129.1 = NW_022045228.1 Primary Assembly 26863 na contig130 unplaced-scaffold na na CAAHFC010000130.1 = NW_022045229.1 Primary Assembly 26524 na contig131 unplaced-scaffold na na CAAHFC010000131.1 = NW_022045230.1 Primary Assembly 25411 na contig132 unplaced-scaffold na na CAAHFC010000132.1 = NW_022045231.1 Primary Assembly 25299 na contig133 unplaced-scaffold na na CAAHFC010000133.1 = NW_022045232.1 Primary Assembly 25263 na contig134 unplaced-scaffold na na CAAHFC010000134.1 = NW_022045233.1 Primary Assembly 25125 na contig135 unplaced-scaffold na na CAAHFC010000135.1 = NW_022045234.1 Primary Assembly 24395 na contig136 unplaced-scaffold na na CAAHFC010000136.1 = NW_022045235.1 Primary Assembly 24467 na contig137 unplaced-scaffold na na CAAHFC010000137.1 = NW_022045236.1 Primary Assembly 24148 na contig138 unplaced-scaffold na na CAAHFC010000138.1 = NW_022045237.1 Primary Assembly 23298 na contig139 unplaced-scaffold na na CAAHFC010000139.1 = NW_022045238.1 Primary Assembly 23045 na contig140 unplaced-scaffold na na CAAHFC010000140.1 = NW_022045239.1 Primary Assembly 22962 na contig141 unplaced-scaffold na na CAAHFC010000141.1 = NW_022045240.1 Primary Assembly 22795 na contig142 unplaced-scaffold na na CAAHFC010000142.1 = NW_022045241.1 Primary Assembly 22768 na contig143 unplaced-scaffold na na CAAHFC010000143.1 = NW_022045242.1 Primary Assembly 21948 na contig144 unplaced-scaffold na na CAAHFC010000144.1 = NW_022045243.1 Primary Assembly 21482 na contig145 unplaced-scaffold na na CAAHFC010000145.1 = NW_022045244.1 Primary Assembly 21607 na contig146 unplaced-scaffold na na CAAHFC010000146.1 = NW_022045245.1 Primary Assembly 21163 na contig147 unplaced-scaffold na na CAAHFC010000147.1 = NW_022045246.1 Primary Assembly 20962 na contig148 unplaced-scaffold na na CAAHFC010000148.1 = NW_022045247.1 Primary Assembly 20830 na contig149 unplaced-scaffold na na CAAHFC010000149.1 = NW_022045248.1 Primary Assembly 20806 na contig150 unplaced-scaffold na na CAAHFC010000150.1 = NW_022045249.1 Primary Assembly 493923 na contig151 unplaced-scaffold na na CAAHFC010000151.1 = NW_022045250.1 Primary Assembly 469395 na MT assembled-molecule MT Mitochondrion na <> NC_024236.1 non-nuclear 16652 na