Share this genome browser with the link:  https://http_host/h/GCF_901765095.1  
Common name: caecilians
Taxonomic name: Microcaecilia unicolor, taxonomy ID: 1415580
Sequencing/Assembly provider ID: SC
Assembly date: 22 Jun 2019
Assembly type: haploid (principal pseudohaplotype of diploid)
Assembly level: Chromosome
Biosample: SAMEA104387962
Assembly accession ID: GCF_901765095.1
Assembly FTP location: GCF/901/765/095/GCF_901765095.1_aMicUni1.1
Total assembly nucleotides: 4,685,939,420
Assembly contig count: 1,081
N50 size: 376,147,139

Data file downloads

Cite reference: To reference these resources in publications, please credit:

Clawson, H., Lee, B.T., Raney, B.J. et al. "GenArk: towards a million UCSC genome browsers.
Genome Biol 24, 217 (2023).

Copy this entire assembly hub for local use

This download is only for the purpose of using this assembly hub in your institution which may have firewall access restrictions to this data.
To download this assembly data, use this rsync command:

  rsync -a -P \
    rsync:// \
which creates the local directory: ./GCF_901765095.1/
or this wget command:
  wget --timestamping -m -nH -x --cut-dirs=6 -e robots=off -np -k \
    --reject "index.html*" -P "GCF_901765095.1" \
which creates a local directory: ./GCF_901765095.1/

There is an included hub.txt file in that download data directory to use for your local track hub instance.
Using the genome browser menus: My Data -> Track Hubs
select the My Hubs tab to enter a URL to this hub.txt file to attach this assembly hub to a genome browser.

The html/GCF_901765095.1_aMicUni1.1.description.html page is information for your users to describe this assembly.
This web page with these instructions is an instance of the html/GCF_901765095.1_aMicUni1.1.description.html file.

See also: track hub help documentation.

At this time, this genome size: 4,685,939,420, is too large (greater than 4294967296), to function with the UCSC blat system. We hope to have improvements to that system in the future to allow blat service for the larger genome sizes.

Search the assembly: